CK937838
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937838 vs. ExPASy Swiss-Prot
Match: H2A_STRPU (Histone H2A, embryonic OS=Strongylocentrotus purpuratus PE=1 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 1.105e-20 Identity = 52/82 (63.41%), Postives = 57/82 (69.51%), Query Frame = 2 Query: 5 YSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 250 Y++RVG GAP GNAARDNKK+RIIPRH+ LAVRNDEEL KLL GVTIA GGVLPNI VLLPKK+ Sbjct: 39 YAKRVGGGAPVYMAAVLEYLTAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKT 120
BLAST of CK937838 vs. ExPASy Swiss-Prot
Match: H2A_PARLI (Histone H2A OS=Paracentrotus lividus PE=3 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 1.105e-20 Identity = 52/82 (63.41%), Postives = 57/82 (69.51%), Query Frame = 2 Query: 5 YSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 250 Y++RVG GAP GNAARDNKK+RIIPRH+ LAVRNDEEL KLL GVTIA GGVLPNI VLLPKK+ Sbjct: 39 YAKRVGGGAPVYMAAVLEYLTAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKT 120
BLAST of CK937838 vs. ExPASy Swiss-Prot
Match: H2AE_PSAMI (Histone H2A, embryonic OS=Psammechinus miliaris PE=3 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 1.105e-20 Identity = 52/82 (63.41%), Postives = 57/82 (69.51%), Query Frame = 2 Query: 5 YSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 250 Y++RVG GAP GNAARDNKK+RIIPRH+ LAVRNDEEL KLL GVTIA GGVLPNI VLLPKK+ Sbjct: 39 YAKRVGGGAPVYMAAVLEYLTAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKT 120
BLAST of CK937838 vs. ExPASy Swiss-Prot
Match: H2A4_PSAMI (Late histone H2A.2.2 OS=Psammechinus miliaris PE=3 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 1.105e-20 Identity = 52/81 (64.20%), Postives = 55/81 (67.90%), Query Frame = 2 Query: 5 YSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKK 247 Y+ RVG GAP GNAARDNKK+RIIPRH+ LAVRNDEEL KLL GVTIA GGVLPNI VLLPKK Sbjct: 39 YANRVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 119
BLAST of CK937838 vs. ExPASy Swiss-Prot
Match: H2A2_PSAMI (Late histone H2A.2.1 OS=Psammechinus miliaris PE=2 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 1.105e-20 Identity = 52/82 (63.41%), Postives = 55/82 (67.07%), Query Frame = 2 Query: 5 YSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 250 Y RVG GAP GNAARDNKK+RIIPRH+ LAVRNDEEL KLL GVTIA GGVLPNI VLLPKK+ Sbjct: 39 YGNRVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQTVLLPKKT 120
BLAST of CK937838 vs. ExPASy Swiss-Prot
Match: H2A1_PSAMI (Late histone H2A.1 OS=Psammechinus miliaris PE=2 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 1.105e-20 Identity = 52/82 (63.41%), Postives = 55/82 (67.07%), Query Frame = 2 Query: 5 YSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 250 Y RVG GAP GNAARDNKK+RIIPRH+ LAVRNDEEL KLL GVTIA GGVLPNI VLLPKK+ Sbjct: 39 YGSRVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKT 120
BLAST of CK937838 vs. ExPASy Swiss-Prot
Match: H2A_PARAN (Histone H2A, gonadal OS=Parechinus angulosus PE=1 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 1.443e-20 Identity = 51/82 (62.20%), Postives = 55/82 (67.07%), Query Frame = 2 Query: 5 YSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 250 Y+ RVG GAP GNAARDNKK RIIPRH+ LA+RNDEEL KLL GVTIA GGVLPNI VLLPKK+ Sbjct: 39 YANRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKT 120
BLAST of CK937838 vs. ExPASy Swiss-Prot
Match: H2A_MYTTR (Histone H2A OS=Mytilus trossulus PE=3 SV=3) HSP 1 Score: 98.9821 bits (245), Expect = 1.443e-20 Identity = 51/82 (62.20%), Postives = 57/82 (69.51%), Query Frame = 2 Query: 5 YSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 250 Y+ RVG GAP GNAARDNKK+RIIPRH+ LA+RNDEEL KLL+GVTIA GGVLPNI VLLPKK+ Sbjct: 39 YAGRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKT 120
BLAST of CK937838 vs. ExPASy Swiss-Prot
Match: H2A3_PSAMI (Late histone H2A.3, gonadal OS=Psammechinus miliaris PE=1 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 1.443e-20 Identity = 51/82 (62.20%), Postives = 55/82 (67.07%), Query Frame = 2 Query: 5 YSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 250 Y+ RVG GAP GNAARDNKK RIIPRH+ LA+RNDEEL KLL GVTIA GGVLPNI VLLPKK+ Sbjct: 39 YANRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKT 120
BLAST of CK937838 vs. ExPASy Swiss-Prot
Match: H2A_PLAFA (Histone H2A OS=Plasmodium falciparum PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.461e-20 Identity = 51/82 (62.20%), Postives = 56/82 (68.29%), Query Frame = 2 Query: 5 YSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 250 Y++RVG GAP GNAARDNKK+RI PRH+ LAVRNDEEL K LAGVT A GGVLPNI+ VLLPKKS Sbjct: 40 YAKRVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRITPRHIQLAVRNDEELNKFLAGVTFASGGVLPNIHNVLLPKKS 121 The following BLAST results are available for this feature:
BLAST of CK937838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937838 ID=CK937838; Name=CK937838; organism=Citrus sinensis; type=EST; length=525bpback to top |