CK937838
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937838 vs. ExPASy Swiss-Prot
Match: H2AXB_ORYSI (Probable histone H2AXb OS=Oryza sativa subsp. indica GN=OsI_037312 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 5.482e-20 Identity = 49/81 (60.49%), Postives = 55/81 (67.90%), Query Frame = 2 Query: 5 YSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKK 247 Y++RVG GAP GNAARDNKKNRI+PRH+ LAVRNDEEL +LL VTIA GGVLPNI+ LLPKK Sbjct: 43 YAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSRLLGAVTIAAGGVLPNIHQTLLPKK 123
BLAST of CK937838 vs. ExPASy Swiss-Prot
Match: H2A_CAIMO (Histone H2A OS=Cairina moschata PE=3 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 7.160e-20 Identity = 50/82 (60.98%), Postives = 55/82 (67.07%), Query Frame = 2 Query: 5 YSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 250 Y++RVG GAP GNAARDNKK RIIPRH+ LA+RNDEEL KLL VTIA GGVLPNI VLLPKK+ Sbjct: 40 YAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKT 121
BLAST of CK937838 vs. ExPASy Swiss-Prot
Match: H2AJ_RAT (Histone H2A.J OS=Rattus norvegicus GN=H2afj PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 7.160e-20 Identity = 50/82 (60.98%), Postives = 55/82 (67.07%), Query Frame = 2 Query: 5 YSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 250 Y++RVG GAP GNAARDNKK RIIPRH+ LA+RNDEEL KLL VTIA GGVLPNI VLLPKK+ Sbjct: 40 YAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKT 121
BLAST of CK937838 vs. ExPASy Swiss-Prot
Match: H2AJ_MOUSE (Histone H2A.J OS=Mus musculus GN=H2afj PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 7.160e-20 Identity = 50/82 (60.98%), Postives = 55/82 (67.07%), Query Frame = 2 Query: 5 YSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 250 Y++RVG GAP GNAARDNKK RIIPRH+ LA+RNDEEL KLL VTIA GGVLPNI VLLPKK+ Sbjct: 40 YAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKT 121
BLAST of CK937838 vs. ExPASy Swiss-Prot
Match: H2AJ_MACFA (Histone H2A.J OS=Macaca fascicularis GN=H2AFJ PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 7.160e-20 Identity = 50/82 (60.98%), Postives = 55/82 (67.07%), Query Frame = 2 Query: 5 YSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 250 Y++RVG GAP GNAARDNKK RIIPRH+ LA+RNDEEL KLL VTIA GGVLPNI VLLPKK+ Sbjct: 40 YAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKT 121
BLAST of CK937838 vs. ExPASy Swiss-Prot
Match: H2AJ_HUMAN (Histone H2A.J OS=Homo sapiens GN=H2AFJ PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 7.160e-20 Identity = 50/82 (60.98%), Postives = 55/82 (67.07%), Query Frame = 2 Query: 5 YSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 250 Y++RVG GAP GNAARDNKK RIIPRH+ LA+RNDEEL KLL VTIA GGVLPNI VLLPKK+ Sbjct: 40 YAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKT 121
BLAST of CK937838 vs. ExPASy Swiss-Prot
Match: H2AJ_CHICK (Histone H2A.J OS=Gallus gallus GN=H2A-IX PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 7.160e-20 Identity = 50/82 (60.98%), Postives = 55/82 (67.07%), Query Frame = 2 Query: 5 YSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 250 Y++RVG GAP GNAARDNKK RIIPRH+ LA+RNDEEL KLL VTIA GGVLPNI VLLPKK+ Sbjct: 40 YAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKT 121
BLAST of CK937838 vs. ExPASy Swiss-Prot
Match: H2AJ_BOVIN (Histone H2A.J OS=Bos taurus GN=H2AFJ PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 7.160e-20 Identity = 50/82 (60.98%), Postives = 55/82 (67.07%), Query Frame = 2 Query: 5 YSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 250 Y++RVG GAP GNAARDNKK RIIPRH+ LA+RNDEEL KLL VTIA GGVLPNI VLLPKK+ Sbjct: 40 YAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKT 121
BLAST of CK937838 vs. ExPASy Swiss-Prot
Match: H2A4_CHICK (Histone H2A-IV OS=Gallus gallus PE=1 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 7.160e-20 Identity = 50/82 (60.98%), Postives = 55/82 (67.07%), Query Frame = 2 Query: 5 YSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 250 Y++RVG GAP GNAARDNKK RIIPRH+ LA+RNDEEL KLL VTIA GGVLPNI VLLPKK+ Sbjct: 40 YAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKT 121
BLAST of CK937838 vs. ExPASy Swiss-Prot
Match: H2A2_CANGA (Histone H2A.2 OS=Candida glabrata GN=HTA2 PE=3 SV=3) HSP 1 Score: 96.6709 bits (239), Expect = 7.160e-20 Identity = 49/82 (59.76%), Postives = 57/82 (69.51%), Query Frame = 2 Query: 5 YSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 250 Y+QR+G+GAP GNAARDNKK+RIIPRH+ LA+RND+EL KLL VTIA GGVLPNI+ LLPKKS Sbjct: 41 YAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPKKS 122 The following BLAST results are available for this feature:
BLAST of CK937838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937838 ID=CK937838; Name=CK937838; organism=Citrus sinensis; type=EST; length=525bpback to top |