CK937823

Overview
NameCK937823
Unique NameCK937823
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length400
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL29_ORYSJ (Beta-glucosidase 29 OS=Oryza sativa subsp. japonica GN=BGLU29 PE=2 SV=2)

HSP 1 Score: 189.119 bits (479), Expect = 5.773e-48
Identity = 82/132 (62.12%), Postives = 105/132 (79.55%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXSKWVNKAC 396
            V ++K+MN+DAFRFSISWSR+LPNG LSGGVN +G++FYNNLINE+++ G++PFVTIFHWD PQALE  YGGFLS  I+ D+ D+AE+CF+EFGDRVK W T NEP +Y + GY  G  A    S +V+ +C
Sbjct:   80 VNLLKDMNMDAFRFSISWSRILPNGTLSGGVNKEGVAFYNNLINEIIAKGMKPFVTIFHWDTPQALESKYGGFLSENIIKDYVDFAEVCFREFGDRVKFWATFNEPWTYCSQGYGTGIHALGRCSPYVSTSC 211          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL30_ORYSJ (Beta-glucosidase 30 OS=Oryza sativa subsp. japonica GN=BGLU30 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 2.194e-47
Identity = 80/132 (60.61%), Postives = 107/132 (81.06%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXSKWVNKAC 396
            V ++K+MN+DAFRFSI+W+R+LPNG LSGG+N +G++FYN+LIN++++ G+ PFVTIFHWD P ALE  YGGFLS  IV ++ D+AE+CF+EFGDRVK+W T NEP +YS  GY KG  AP   S +V+K+C
Sbjct:   91 VSLLKDMNMDAFRFSIAWTRILPNGSLSGGINKEGVAFYNSLINDVIAKGMIPFVTIFHWDTPLALESKYGGFLSEDIVKEYVDFAEVCFREFGDRVKYWTTFNEPFTYSAYGYGKGVFAPGRCSSYVSKSC 222          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL17_ARATH (Beta-glucosidase 17 OS=Arabidopsis thaliana GN=BGLU17 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 2.194e-47
Identity = 82/125 (65.60%), Postives = 104/125 (83.20%), Query Frame = 1
Query:   10 MKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXSKWV 384
            MKE+ LD+FRFSISWSR+LP G ++GGVN  GI+FYN+LINEL+SNG++P VT+FHWD PQALED+YGGFL+P+IV DF +Y ++CFKEFGDRVK WIT+NEP+ ++  GYN G  AP   S +V
Sbjct:  103 MKEIGLDSFRFSISWSRILPRGTVAGGVNQAGINFYNHLINELISNGIRPLVTLFHWDTPQALEDEYGGFLNPQIVKDFVEYVDICFKEFGDRVKEWITINEPNMFAVLGYNVGNIAPGRCSSYV 227          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL25_ARATH (Probable inactive beta-glucosidase 25 OS=Arabidopsis thaliana GN=BGLU25 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 1.089e-46
Identity = 77/132 (58.33%), Postives = 106/132 (80.30%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXSKWVNKAC 396
            V+++K++N+DAFRFSISWSR+ P+GK   GV+  G+ FYN+LINEL++NG+ P VT+F WD+PQALED+YGGFLS RI+ DF+D+A+  F ++GDRVKHW+T+NEP+ +S  GY  G  AP   SK+VN+ C
Sbjct:   99 VQLLKKLNMDAFRFSISWSRIFPHGKKDKGVSETGVKFYNDLINELIANGVTPLVTLFQWDVPQALEDEYGGFLSDRILEDFRDFAQFAFNKYGDRVKHWVTINEPYEFSRGGYETGEKAPGRCSKYVNEKC 230          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL28_ARATH (Beta-glucosidase 28 OS=Arabidopsis thaliana GN=BGLU28 PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 1.422e-46
Identity = 77/133 (57.89%), Postives = 108/133 (81.20%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXSKWVNKACQ 399
            +K+MKE+N+DAFRFSISW+RL+P+GK+  GVN +G+ FY  LI+EL++NG++P +T++HWD PQ+LED+YGGFLSP+IV DF+D++ +CF+EFGD+VK W T+NEP+  +  GY+ G  A    SKWVN  CQ
Sbjct:   93 IKLMKELNMDAFRFSISWARLIPSGKVKDGVNKEGVEFYKALIDELVANGIEPSMTLYHWDHPQSLEDEYGGFLSPQIVEDFRDFSRVCFEEFGDKVKMWTTINEPYVITVAGYDTGNKAVGRCSKWVNSKCQ 225          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL24_ORYSJ (Beta-glucosidase 24 OS=Oryza sativa subsp. japonica GN=BGLU24 PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 1.422e-46
Identity = 84/132 (63.64%), Postives = 103/132 (78.03%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXSKWVNKAC 396
            V IMK + L+A+RFS+SW R+LPNGKLSGGVN +GI +YNNLI+EL+S G++PFVT+FHWD PQALE  YGGFLS  IV DF+DYA++CF+EFGDRVK+WIT NEP S+S  GY+ G  AP   S      C
Sbjct:   93 VGIMKGLGLNAYRFSVSWPRILPNGKLSGGVNLEGIKYYNNLIDELISKGVEPFVTLFHWDSPQALEQQYGGFLSNLIVEDFRDYADICFREFGDRVKYWITFNEPWSFSIGGYSNGILAPGRCSSQGKSGC 224          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL29_ARATH (Beta-glucosidase 29 OS=Arabidopsis thaliana GN=BGLU29 PE=2 SV=2)

HSP 1 Score: 181.415 bits (459), Expect = 1.204e-45
Identity = 76/133 (57.14%), Postives = 107/133 (80.45%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXSKWVNKACQ 399
            +K+++E+N+DAFRFSISW+RL+P+GK+  GVN +G+ FY  LI+EL++NG+QP VT++HWD PQALED+YGGFL+P+I+ DF+++A +CF+ FGD+VK W T+NEP+  S  GY+ G  A    SKWVN  CQ
Sbjct:   93 IKLIEELNVDAFRFSISWARLIPSGKVKDGVNKEGVQFYKALIDELIANGIQPSVTLYHWDHPQALEDEYGGFLNPQIIEDFRNFARVCFENFGDKVKMWTTINEPYVISVAGYDTGIKAVGRCSKWVNSRCQ 225          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL33_ARATH (Beta-glucosidase 33 OS=Arabidopsis thaliana GN=BGLU33 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 2.053e-45
Identity = 80/132 (60.61%), Postives = 101/132 (76.52%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXSKWVNKAC 396
            +K+MKE+N + FRFSISW+R+LP G +  GVN +G+ FYN+LINELL+NG+QP VT+FHW+ P ALE +YGGFL+ RIV DF+++A  CFKEFGDRVK+W T NEP  YS  GY+KG  AP   SKW    C
Sbjct:  159 IKLMKELNTNGFRFSISWTRILPYGTIKKGVNEEGVKFYNDLINELLANGIQPSVTLFHWESPLALEMEYGGFLNERIVEDFREFANFCFKEFGDRVKNWATFNEPSVYSVAGYSKGKKAPGRCSKWQAPKC 290          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL27_ORYSJ (Beta-glucosidase 27 OS=Oryza sativa subsp. japonica GN=BGLU27 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 2.053e-45
Identity = 81/132 (61.36%), Postives = 102/132 (77.27%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXSKWVNKAC 396
            +  + +MN+DAFRFSI+WSR+LPNG +SGG+N +GI+FYN+LINE++S GL+PFVTIFH+D PQALED Y  FLS  IV DF DYA++CF+EFGDRVK W T NEP  +   GY  GT AP   S +V+K C
Sbjct:   88 LNFVTDMNMDAFRFSIAWSRILPNGTISGGINKEGIAFYNSLINEVISRGLKPFVTIFHFDTPQALEDKYRSFLSENIVKDFVDYADVCFREFGDRVKSWNTFNEPMIFCAGGYGSGTKAPGRCSPYVSKKC 219          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL12_ARATH (Beta-glucosidase 12 OS=Arabidopsis thaliana GN=BGLU12 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 5.974e-45
Identity = 80/132 (60.61%), Postives = 97/132 (73.48%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXSKWVNKAC 396
            V ++ ++  DA+RFSISWSR+LP   L GG+N  GI +YNNLINELLS G++PF TIFHWD PQ+LED YGGFL   IV DF+DYA++CFK FGDRVKHW+TLNEP +    GY  G  AP   SK+ N  C
Sbjct:   96 VGLLHQIGFDAYRFSISWSRILPRENLKGGINQAGIDYYNNLINELLSKGIKPFATIFHWDTPQSLEDAYGGFLGAEIVNDFRDYADICFKNFGDRVKHWMTLNEPLTVVQQGYVAGVMAPGRCSKFTNPNC 227          
The following BLAST results are available for this feature:
BLAST of CK937823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 174
Match NameE-valueIdentityDescription
BGL29_ORYSJ5.773e-4862.12Beta-glucosidase 29 OS=Oryza sativa subsp. japonic... [more]
BGL30_ORYSJ2.194e-4760.61Beta-glucosidase 30 OS=Oryza sativa subsp. japonic... [more]
BGL17_ARATH2.194e-4765.60Beta-glucosidase 17 OS=Arabidopsis thaliana GN=BGL... [more]
BGL25_ARATH1.089e-4658.33Probable inactive beta-glucosidase 25 OS=Arabidops... [more]
BGL28_ARATH1.422e-4657.89Beta-glucosidase 28 OS=Arabidopsis thaliana GN=BGL... [more]
BGL24_ORYSJ1.422e-4663.64Beta-glucosidase 24 OS=Oryza sativa subsp. japonic... [more]
BGL29_ARATH1.204e-4557.14Beta-glucosidase 29 OS=Arabidopsis thaliana GN=BGL... [more]
BGL33_ARATH2.053e-4560.61Beta-glucosidase 33 OS=Arabidopsis thaliana GN=BGL... [more]
BGL27_ORYSJ2.053e-4561.36Beta-glucosidase 27 OS=Oryza sativa subsp. japonic... [more]
BGL12_ARATH5.974e-4560.61Beta-glucosidase 12 OS=Arabidopsis thaliana GN=BGL... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004481_D06 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0001_IIIF_D06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937823 ID=CK937823; Name=CK937823; organism=Citrus sinensis; type=EST; length=400bp
GTGAAGATTATGAAGGAAATGAATTTGGATGCTTTCAGATTCTCCATCTC
CTGGTCTAGATTATTACCAAATGGAAAGCTAAGTGGTGGAGTGAACAACA
AAGGCATTAGTTTCTACAATAATCTCATCAACGAGCTCCTCTCAAATGGA
TTGCAACCCTTTGTTACTATCTTTCACTGGGATCTTCCACAGGCCCTGGA
AGATGACTATGGTGGCTTTTTAAGCCCTCGCATTGTGGCTGATTTTCAAG
ACTATGCGGAGCTTTGCTTCAAAGAATTTGGTGATCGCGTAAAGCATTGG
ATCACTTTAAATGAGCCACATTCATACAGTAATAATGGCTATAATAAGGG
TACCGATGCACCANNANNNNGTTCCAAATGGGTAAACAAAGCATGCCAGG
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