CK937823

Overview
NameCK937823
Unique NameCK937823
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length400
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: LPH_HUMAN (Lactase-phlorizin hydrolase OS=Homo sapiens GN=LCT PE=1 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 2.979e-28
Identity = 56/121 (46.28%), Postives = 83/121 (68.60%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAP 363
            + +++ + + A+RFSISWSR+ P G+ S  +N+ G+ +YN LIN L+++ + P VT+FHWDLPQAL+ D GG+ +P ++  F  YA+ CF+ FGDRVK W+T NEP   +  GY  G   P
Sbjct:  963 LNMLRALKVKAYRFSISWSRIFPTGRNSS-INSHGVDYYNRLINGLVASNIFPMVTLFHWDLPQALQ-DIGGWENPALIDLFDSYADFCFQTFGDRVKFWMTFNEPMYLAWLGYGSGEFPP 1081          

HSP 2 Score: 117.087 bits (292), Expect = 2.788e-26
Identity = 56/118 (47.46%), Postives = 82/118 (69.49%), Query Frame = 1
Query:   10 MKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAP 363
            ++ + +  +RFSISWSR+LP+G  +  +N  G+++Y  LI+ LL+  +QP VTI+HWDLPQ L+D  GG+ +  IV  F++YA++ F+  GD+VK WITLNEP   +  GY  GT AP
Sbjct: 1439 LQNLGVSHYRFSISWSRILPDGT-TRYINEAGLNYYVRLIDTLLAASIQPQVTIYHWDLPQTLQD-VGGWENETIVQRFKEYADVLFQRLGDKVKFWITLNEPFVIAYQGYGYGTAAP 1554          

HSP 3 Score: 111.694 bits (278), Expect = 1.171e-24
Identity = 54/121 (44.63%), Postives = 75/121 (61.98%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAP 363
            V ++  +    ++FSISWSR+ P G  S   +  G+++YN LI+ L   G++P  T+FHWDLPQAL+D +GG+ +  +V  F DYA  CF  FGDRVK W+T +EP   S  GY  G   P
Sbjct:  440 VALLCGLRAQVYKFSISWSRIFPMGHGSSP-SLPGVAYYNKLIDRLQDAGIEPMATLFHWDLPQALQD-HGGWQNESVVDAFLDYAAFCFSTFGDRVKLWVTFHEPWVMSYAGYGTGQHPP 558          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL17_ORYSJ (Putative beta-glucosidase 17 OS=Oryza sativa subsp. japonica GN=BGLU17 PE=2 SV=3)

HSP 1 Score: 122.865 bits (307), Expect = 5.081e-28
Identity = 59/125 (47.20%), Postives = 85/125 (68.00%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXS 375
            V+I+  + ++++RFSISW+R+LP+    GGVN+ GI+FYN LI+ LL  G+QPFVT+ H+D+PQ LE  YGG+L   I  +F  Y+++CFK FGDRV+ W T NEP+  +   +  G   P   S
Sbjct:   93 VEILHNLGVNSYRFSISWARILPSR--FGGVNSAGIAFYNRLIDALLQKGIQPFVTLNHFDIPQELEIRYGGWLGAGIREEFGYYSDVCFKAFGDRVRFWTTFNEPNLITKFQFMLGAYPPNRCS 215          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGLA_BACCI (Beta-glucosidase OS=Bacillus circulans GN=bglA PE=1 SV=3)

HSP 1 Score: 121.709 bits (304), Expect = 1.132e-27
Identity = 57/121 (47.11%), Postives = 83/121 (68.60%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAP 363
            V+++K++ +  +RFSISW R+LP G  +G VN  G+ +Y+ L++ELL+NG++PF T++HWDLPQAL+D  GG+ S   +  F +YAEL FKE G ++K WIT NEP   +      G  AP
Sbjct:   65 VQLLKDLGVKVYRFSISWPRVLPQG--TGEVNRAGLDYYHRLVDELLANGIEPFCTLYHWDLPQALQDQ-GGWGSRITIDAFAEYAELMFKELGGKIKQWITFNEPWCMAFLSNYLGVHAP 182          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGLA_THEMA (Beta-glucosidase A OS=Thermotoga maritima GN=bglA PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.931e-27
Identity = 59/121 (48.76%), Postives = 84/121 (69.42%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAP 363
            ++I++++ + A+RFSISW R+LP G  +G VN KG+ FYN +I+ LL  G+ PFVTI+HWDLP AL+   GG+ +  I   F +Y+ + F+ FGDRVK+WITLNEP   +  G+  G  AP
Sbjct:   65 IEIIEKLGVKAYRFSISWPRILPEG--TGRVNQKGLDFYNRIIDTLLEKGITPFVTIYHWDLPFALQLK-GGWANREIADWFAEYSRVLFENFGDRVKNWITLNEPWVVAIVGHLYGVHAP 182          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: GMUD_BACSU (6-phospho-beta-glucosidase gmuD OS=Bacillus subtilis GN=gmuD PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 2.522e-27
Identity = 55/114 (48.25%), Postives = 82/114 (71.93%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGY 342
            +++MKE+  ++FR SISWSRL+PNG  +G +N+K   FYNN+I+EL++NG++PFV +FH+D+P AL+   GG+++   V  +++YA  CF+ FG RVK W T NEP      GY
Sbjct:   69 IRLMKELGHNSFRMSISWSRLIPNG--TGEINDKAADFYNNVIDELIANGIEPFVNLFHFDMPMALQ-KIGGWVNRETVDAYENYARTCFRLFGGRVKKWFTHNEPIVPVEGGY 179          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL43_ARATH (Beta-glucosidase 43 OS=Arabidopsis thaliana GN=BGLU43 PE=2 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 1.251e-26
Identity = 56/126 (44.44%), Postives = 82/126 (65.08%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXSK 378
            V +M+ +N+DA+RFSISWSR+ P G  SG +N+ G+++YN LI+ L+  G+ P+  ++H+DLP ALE  Y G LS +    F     + F+ FGDRVK+W+T NEP   +  GY+ G  AP   S+
Sbjct:   94 VDLMQNLNIDAYRFSISWSRIFPEG--SGKINSNGVAYYNRLIDYLIEKGITPYANLYHYDLPLALEQKYQGLLSKQ--GRFCGLRRVLFQTFGDRVKNWMTFNEPRVVAALGYDNGIFAPGRCSE 215          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGLA_THENN (Beta-glucosidase A OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=bglA PE=1 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 1.634e-26
Identity = 57/121 (47.11%), Postives = 82/121 (67.77%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAP 363
            ++I++++   A+RFSISW R+LP G  +G VN KG+ FYN +I+ LL   + PF+TI+HWDLP +L+   GG+ +  I   F +Y+ + F+ FGDRVKHWITLNEP   +  G+  G  AP
Sbjct:   63 IEIIEKIGAKAYRFSISWPRILPEG--TGKVNQKGLDFYNRIIDTLLEKNITPFITIYHWDLPFSLQLK-GGWANRDIADWFAEYSRVLFENFGDRVKHWITLNEPWVVAIVGHLYGVHAP 180          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGLA_THENE (Beta-glucosidase A (Fragment) OS=Thermotoga neapolitana GN=bglA PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.634e-26
Identity = 57/121 (47.11%), Postives = 82/121 (67.77%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAP 363
            ++I++++   A+RFSISW R+LP G  +G VN KG+ FYN +I+ LL   + PF+TI+HWDLP +L+   GG+ +  I   F +Y+ + F+ FGDRVKHWITLNEP   +  G+  G  AP
Sbjct:   63 IEIIEKIGAKAYRFSISWPRILPEG--TGKVNQKGLDFYNRIIDTLLEKNITPFITIYHWDLPFSLQLK-GGWANRDIADWFAEYSRVLFENFGDRVKHWITLNEPWVVAIVGHLYGVHAP 180          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL45_ARATH (Beta-glucosidase 45 OS=Arabidopsis thaliana GN=BGLU45 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.641e-26
Identity = 55/125 (44.00%), Postives = 82/125 (65.60%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXS 375
            +++M  + ++++RFSISW R+LP G+  G +N  GI +YN  I+ L+S G++PFVT+ H D PQ LED +  +L+P +  +F   A++CFK FG+RVK+W TLNEP+     GY  G   P   S
Sbjct:   98 IQLMSFLGVNSYRFSISWCRILPRGRF-GEINYLGIKYYNIFIDALISRGIKPFVTLNHVDYPQELEDRFQSWLNPEMQKEFGYLADICFKHFGNRVKYWTTLNEPNQQLILGYLTGKFPPSRCS 221          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: KLOTB_MOUSE (Beta-klotho OS=Mus musculus GN=Klb PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 8.112e-26
Identity = 48/115 (41.74%), Postives = 79/115 (68.70%), Query Frame = 1
Query:   19 MNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAP 363
            + +  ++FSISW RL PNG ++  VN +G+ +Y  L++ L+   ++P VT++HWDLP  L+++YGG+ +  ++  F DYA  CF+ FGDRVK+WIT++ P+  + +G+  G  AP
Sbjct:  144 LGVSFYQFSISWPRLFPNGTVAA-VNAQGLRYYRALLDSLVLRNIEPIVTLYHWDLPLTLQEEYGGWKNATMIDLFNDYATYCFQTFGDRVKYWITIHNPYLVAWHGFGTGMHAP 257          

HSP 2 Score: 87.0409 bits (214), Expect = 3.090e-17
Identity = 48/121 (39.67%), Postives = 75/121 (61.98%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFH-----WDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNK 348
            V+++ +M +  ++F++ W+ +LP G LS  VN + + +Y  +++E L  G+ P VT++H       LP  L    GG+L+      FQDYAELCF+E GD VK WIT+NEP+  S+  YN+
Sbjct:  584 VEMLAKMKVTHYQFALDWTSILPTGNLSK-VNRQVLRYYRCVVSEGLKLGVFPMVTLYHPTHSHLGLPLPLLSS-GGWLNMNTAKAFQDYAELCFRELGDLVKLWITINEPNRLSDM-YNR 701          
The following BLAST results are available for this feature:
BLAST of CK937823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 174
Match NameE-valueIdentityDescription
LPH_HUMAN2.979e-2846.28Lactase-phlorizin hydrolase OS=Homo sapiens GN=LCT... [more]
BGL17_ORYSJ5.081e-2847.20Putative beta-glucosidase 17 OS=Oryza sativa subsp... [more]
BGLA_BACCI1.132e-2747.11Beta-glucosidase OS=Bacillus circulans GN=bglA PE=... [more]
BGLA_THEMA1.931e-2748.76Beta-glucosidase A OS=Thermotoga maritima GN=bglA ... [more]
GMUD_BACSU2.522e-2748.256-phospho-beta-glucosidase gmuD OS=Bacillus subtil... [more]
BGL43_ARATH1.251e-2644.44Beta-glucosidase 43 OS=Arabidopsis thaliana GN=BGL... [more]
BGLA_THENN1.634e-2647.11Beta-glucosidase A OS=Thermotoga neapolitana (stra... [more]
BGLA_THENE1.634e-2647.11Beta-glucosidase A (Fragment) OS=Thermotoga neapol... [more]
BGL45_ARATH3.641e-2644.00Beta-glucosidase 45 OS=Arabidopsis thaliana GN=BGL... [more]
KLOTB_MOUSE8.112e-2641.74Beta-klotho OS=Mus musculus GN=Klb PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004481_D06 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0001_IIIF_D06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937823 ID=CK937823; Name=CK937823; organism=Citrus sinensis; type=EST; length=400bp
GTGAAGATTATGAAGGAAATGAATTTGGATGCTTTCAGATTCTCCATCTC
CTGGTCTAGATTATTACCAAATGGAAAGCTAAGTGGTGGAGTGAACAACA
AAGGCATTAGTTTCTACAATAATCTCATCAACGAGCTCCTCTCAAATGGA
TTGCAACCCTTTGTTACTATCTTTCACTGGGATCTTCCACAGGCCCTGGA
AGATGACTATGGTGGCTTTTTAAGCCCTCGCATTGTGGCTGATTTTCAAG
ACTATGCGGAGCTTTGCTTCAAAGAATTTGGTGATCGCGTAAAGCATTGG
ATCACTTTAAATGAGCCACATTCATACAGTAATAATGGCTATAATAAGGG
TACCGATGCACCANNANNNNGTTCCAAATGGGTAAACAAAGCATGCCAGG
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