CK937823

Overview
NameCK937823
Unique NameCK937823
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length400
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: KLOTB_HUMAN (Beta-klotho OS=Homo sapiens GN=KLB PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 8.112e-26
Identity = 50/110 (45.45%), Postives = 77/110 (70.00%), Query Frame = 1
Query:   34 FRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAP 363
            ++FSISW RL P+G ++   N KG+ +Y+ L++ L+   ++P VT++HWDLP AL++ YGG+ +  I+  F DYA  CF+ FGDRVK+WIT++ P+  + +GY  G  AP
Sbjct:  149 YQFSISWPRLFPDGIVTVA-NAKGLQYYSTLLDALVLRNIEPIVTLYHWDLPLALQEKYGGWKNDTIIDIFNDYATYCFQMFGDRVKYWITIHNPYLVAWHGYGTGMHAP 257          

HSP 2 Score: 82.8037 bits (203), Expect = 5.827e-16
Identity = 45/124 (36.29%), Postives = 71/124 (57.26%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIF-----HWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTD 357
            ++++  M +  +RF++ W+ +LP G LS  VN + + +Y  +++E L  G+   VT++     H  LP+ L     G+L+P     FQ YA LCF+E GD VK WIT+NEP+  S+     G D
Sbjct:  586 LEMLARMKVTHYRFALDWASVLPTGNLSA-VNRQALRYYRCVVSEGLKLGISAMVTLYYPTHAHLGLPEPLLHA-DGWLNPSTAEAFQAYAGLCFQELGDLVKLWITINEPNRLSDIYNRSGND 707          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGLA_PAEPO (Beta-glucosidase A OS=Paenibacillus polymyxa GN=bglA PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 3.083e-25
Identity = 50/121 (41.32%), Postives = 80/121 (66.12%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAP 363
            +++MKE+ +  +RFS+SW R+ PNG   G VN +G+ +Y+ +++ L  NG++PF T++HWDLPQAL+ D GG+ + R +  F  +AE  F+EF  +++HW+T NEP   +      G  AP
Sbjct:   65 IRLMKELGIRTYRFSVSWPRIFPNG--DGEVNQEGLDYYHRVVDLLNDNGIEPFCTLYHWDLPQALQ-DAGGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAP 182          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGLA_CLOTH (Beta-glucosidase A OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=bglA PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 6.867e-25
Identity = 56/121 (46.28%), Postives = 76/121 (62.81%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAP 363
            +KIMKE+ + ++RFSISW R+ P G  +G +N KG+ FY  L N LL NG+ P +T++HWDLPQ L+D  GG+ +      F +Y+E+ FK  GD V  W T NEP   S  G+  G  AP
Sbjct:   65 IKIMKEIGIKSYRFSISWPRIFPEG--TGKLNQKGLDFYKRLTNLLLENGIMPAITLYHWDLPQKLQDK-GGWKNRDTTDYFTEYSEVIFKNLGDIVPIWFTHNEPGVVSLLGHFLGIHAP 182          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: LACG_CLOAB (6-phospho-beta-galactosidase OS=Clostridium acetobutylicum GN=lacG PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.870e-22
Identity = 51/121 (42.15%), Postives = 78/121 (64.46%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAP 363
            +K  ++  ++  R SI+WSR++P+GK  G VN KG+ FY++LI+E + N ++PFVT+ H+D P  L  D G +L+   +  F  +A++CF+  GDRVK WIT NE  + + NGY  G   P
Sbjct:   59 LKFSRKFGVNGIRISIAWSRVIPDGK--GEVNPKGLKFYSDLIDECIKNNVEPFVTLHHFDTPLTLFKD-GDWLNRNNIDYFVRFAKVCFEALGDRVKKWITFNEAWAVAQNGYIIGNFPP 176          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGLB_PAEPO (Beta-glucosidase B OS=Paenibacillus polymyxa GN=bglB PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.190e-22
Identity = 47/121 (38.84%), Postives = 77/121 (63.64%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAP 363
            V++MK++    +RFS++W R++P    +G +N +G+ FY +L++E+   GL P +T++HWDLPQ +ED+ GG+     +  F+ YA +    FG+R+  W T+NEP+  S  GY  G  AP
Sbjct:   67 VQLMKQLGFLHYRFSVAWPRIMP---AAGIINEEGLLFYEHLLDEIELAGLIPMLTLYHWDLPQWIEDE-GGWTQRETIQHFKTYASVIMDRFGERINWWNTINEPYCASILGYGTGEHAP 183          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGLB_MICBI (Thermostable beta-glucosidase B OS=Microbispora bispora GN=bglB PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 9.281e-22
Identity = 48/106 (45.28%), Postives = 71/106 (66.98%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEP 318
            V++M  +    +RFS++W R++P+G  SG VN  G+ FY+ L++ELL +G+ P+ T++HWDLPQ LE D GG+ +      F +YA    +  GDRV+ WITLNEP
Sbjct:   95 VRLMAGLGDRVYRFSVAWPRIVPDG--SGPVNPAGLDFYDRLVDELLGHGITPYPTLYHWDLPQTLE-DRGGWAARDTAYRFAEYALAVHRRLGDRVRCWITLNEP 197          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: LACG_STRPF (6-phospho-beta-galactosidase OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=lacG PE=3 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 2.986e-20
Identity = 50/121 (41.32%), Postives = 71/121 (58.68%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAP 363
            +K+ +E  ++  R SI+WSR+ P GK  G VN KG+ +Y+NL  E     ++PFVT+ H+D P+AL  D G FL+   +  F +YAE CFKEF + V +W T NE     +  Y  G   P
Sbjct:   60 LKLSEEFGVNGIRISIAWSRIFPTGK--GDVNPKGVEYYHNLFAECHKRHVEPFVTLHHFDTPEALHSD-GDFLNRENIEHFVNYAEFCFKEFSE-VNYWTTFNEIGPIGDGQYLVGKFPP 176          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: LACG_STRP8 (6-phospho-beta-galactosidase OS=Streptococcus pyogenes serotype M18 GN=lacG PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 2.986e-20
Identity = 50/121 (41.32%), Postives = 71/121 (58.68%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAP 363
            +K+ +E  ++  R SI+WSR+ P GK  G VN KG+ +Y+NL  E     ++PFVT+ H+D P+AL  D G FL+   +  F +YAE CFKEF + V +W T NE     +  Y  G   P
Sbjct:   60 LKLSEEFGVNGIRISIAWSRIFPTGK--GDVNPKGVEYYHNLFAECHKRHVEPFVTLHHFDTPEALHSD-GDFLNRENIEHFVNYAEFCFKEFSE-VNYWTTFNEIGPIGDGQYLVGKFPP 176          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: LACG_STRPM (6-phospho-beta-galactosidase OS=Streptococcus pyogenes serotype M28 GN=lacG PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 3.899e-20
Identity = 50/121 (41.32%), Postives = 71/121 (58.68%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAP 363
            +K+ +E  ++  R SI+WSR+ P GK  G VN KG+ +Y+NL  E     ++PFVT+ H+D P+AL  D G FL+   +  F +YAE CFKEF + V +W T NE     +  Y  G   P
Sbjct:   60 LKLSEEFGVNGIRISIAWSRIFPTGK--GEVNPKGVEYYHNLFAECHKRHVEPFVTLHHFDTPEALHSD-GDFLNRENIEHFVNYAEFCFKEFSE-VNYWTTFNEIGPIGDGQYLVGKFPP 176          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: LACG_STRPG (6-phospho-beta-galactosidase OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=lacG PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 3.899e-20
Identity = 50/121 (41.32%), Postives = 71/121 (58.68%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAP 363
            +K+ +E  ++  R SI+WSR+ P GK  G VN KG+ +Y+NL  E     ++PFVT+ H+D P+AL  D G FL+   +  F +YAE CFKEF + V +W T NE     +  Y  G   P
Sbjct:   60 LKLSEEFGVNGIRISIAWSRIFPTGK--GEVNPKGVEYYHNLFAECHKRHVEPFVTLHHFDTPEALHSD-GDFLNRENIEHFVNYAEFCFKEFSE-VNYWTTFNEIGPIGDGQYLVGKFPP 176          
The following BLAST results are available for this feature:
BLAST of CK937823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 174
Match NameE-valueIdentityDescription
KLOTB_HUMAN8.112e-2645.45Beta-klotho OS=Homo sapiens GN=KLB PE=1 SV=1[more]
BGLA_PAEPO3.083e-2541.32Beta-glucosidase A OS=Paenibacillus polymyxa GN=bg... [more]
BGLA_CLOTH6.867e-2546.28Beta-glucosidase A OS=Clostridium thermocellum (st... [more]
LACG_CLOAB1.870e-2242.156-phospho-beta-galactosidase OS=Clostridium acetob... [more]
BGLB_PAEPO3.190e-2238.84Beta-glucosidase B OS=Paenibacillus polymyxa GN=bg... [more]
BGLB_MICBI9.281e-2245.28Thermostable beta-glucosidase B OS=Microbispora bi... [more]
LACG_STRPF2.986e-2041.326-phospho-beta-galactosidase OS=Streptococcus pyog... [more]
LACG_STRP82.986e-2041.326-phospho-beta-galactosidase OS=Streptococcus pyog... [more]
LACG_STRPM3.899e-2041.326-phospho-beta-galactosidase OS=Streptococcus pyog... [more]
LACG_STRPG3.899e-2041.326-phospho-beta-galactosidase OS=Streptococcus pyog... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004481_D06 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0001_IIIF_D06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937823 ID=CK937823; Name=CK937823; organism=Citrus sinensis; type=EST; length=400bp
GTGAAGATTATGAAGGAAATGAATTTGGATGCTTTCAGATTCTCCATCTC
CTGGTCTAGATTATTACCAAATGGAAAGCTAAGTGGTGGAGTGAACAACA
AAGGCATTAGTTTCTACAATAATCTCATCAACGAGCTCCTCTCAAATGGA
TTGCAACCCTTTGTTACTATCTTTCACTGGGATCTTCCACAGGCCCTGGA
AGATGACTATGGTGGCTTTTTAAGCCCTCGCATTGTGGCTGATTTTCAAG
ACTATGCGGAGCTTTGCTTCAAAGAATTTGGTGATCGCGTAAAGCATTGG
ATCACTTTAAATGAGCCACATTCATACAGTAATAATGGCTATAATAAGGG
TACCGATGCACCANNANNNNGTTCCAAATGGGTAAACAAAGCATGCCAGG
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