CK937823

Overview
NameCK937823
Unique NameCK937823
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length400
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL27_ARATH (Beta-glucosidase 27 OS=Arabidopsis thaliana GN=BGLU27 PE=2 SV=2)

HSP 1 Score: 178.718 bits (452), Expect = 7.803e-45
Identity = 81/131 (61.83%), Postives = 102/131 (77.86%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXSKWVNKA 393
            ++ MK++N+DAFRFSISW R+ P GK S GVN +GI FYN+LI+ELL+NG+ P  T+FHWD PQALED+Y GFLS   V DF+D+A LCF+EFGDRVK W+TLNEP  YS  GY+ G  AP   SK++N+A
Sbjct:   78 IQRMKDINMDAFRFSISWPRIFPLGKKSKGVNKEGIQFYNDLIDELLANGITPLATLFHWDTPQALEDEYSGFLSEEAVDDFKDFAALCFEEFGDRVKLWVTLNEPWVYSIGGYDTGRKAPGRASKYMNEA 208          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL15_ARATH (Beta-glucosidase 15 OS=Arabidopsis thaliana GN=BGLU15 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 1.019e-44
Identity = 79/132 (59.85%), Postives = 97/132 (73.48%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXSKWVNKAC 396
            V ++ ++  +A+RFSISWSR+LP G L GG+N  GI +YNNLINELLS G++PF T+FHWD PQALED YGGF    IV DF+DYA++CFK FGDRVKHW+TLNEP +    GY  G  AP   SK+ N  C
Sbjct:   96 VALLHQIGFNAYRFSISWSRILPRGNLKGGINQAGIDYYNNLINELLSKGIKPFATMFHWDTPQALEDAYGGFRGAEIVNDFRDYADICFKNFGDRVKHWMTLNEPLTVVQQGYVAGVMAPGRCSKFTNPNC 227          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL14_ARATH (Beta-glucosidase 14 OS=Arabidopsis thaliana GN=BGLU14 PE=2 SV=2)

HSP 1 Score: 177.948 bits (450), Expect = 1.331e-44
Identity = 80/132 (60.61%), Postives = 96/132 (72.73%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXSKWVNKAC 396
            V ++ ++  +A+RFSISWSR+LP G L GG+N  GI +YNNLINELLS G++PF TIFHWD PQ LED YGGF    IV DF+DYA++CFK FGDRVKHWITLNEP +    GY  G  AP   SK+ N  C
Sbjct:   95 VGLLHQIGFNAYRFSISWSRILPRGNLKGGINQAGIDYYNNLINELLSKGIKPFATIFHWDTPQDLEDAYGGFRGAEIVNDFRDYADICFKSFGDRVKHWITLNEPLTVVQQGYVAGVMAPGRCSKFTNPNC 226          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL13_ARATH (Beta-glucosidase 13 OS=Arabidopsis thaliana GN=BGLU13 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 1.331e-44
Identity = 79/132 (59.85%), Postives = 96/132 (72.73%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXSKWVNKAC 396
            V ++ ++   A+RFSISWSR+LP G L GG+N  GI +YNNLINELLS G++PF TIFHWD PQ+LED YGGF    IV DF+DYA++CFK FGDRVKHW+TLNEP +    GY  G  AP   SK+ N  C
Sbjct:   96 VGLLHQIGFGAYRFSISWSRILPRGNLKGGINQAGIDYYNNLINELLSKGIKPFATIFHWDTPQSLEDAYGGFFGAEIVNDFRDYADICFKNFGDRVKHWMTLNEPLTVVQQGYVAGVMAPGRCSKFTNPNC 227          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL34_ARATH (Myrosinase 4 OS=Arabidopsis thaliana GN=TGG4 PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 1.127e-43
Identity = 76/121 (62.81%), Postives = 99/121 (81.82%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAP 363
            VK++K MN+ A+R SI+WSR+LP G+L+GGV+  GI++YNNLINEL +NG++P+VTIFHWD+PQ LED+YGGFLS RIV D+ +YAEL F+ FGDRVK WITLN+P S +  GY  G+  P
Sbjct:  107 VKLLKRMNVQAYRLSIAWSRVLPKGRLTGGVDENGITYYNNLINELKANGIEPYVTIFHWDVPQTLEDEYGGFLSTRIVEDYTNYAELLFQRFGDRVKFWITLNQPFSLATKGYGDGSYPP 227          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL35_ARATH (Myrosinase 5 OS=Arabidopsis thaliana GN=TGG5 PE=1 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 3.278e-43
Identity = 76/121 (62.81%), Postives = 99/121 (81.82%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAP 363
            VK++K MN+ A+R SI+WSR+LP G+L+GGV+  GI++YNNLINEL +NG++P+VTIFHWD+PQ LED+YGGFLS RIV D+ +YAEL F+ FGDRVK WITLN+P S +  GY  G+  P
Sbjct:  107 VKLLKRMNVQAYRLSIAWSRVLPKGRLTGGVDENGITYYNNLINELKANGIEPYVTIFHWDVPQTLEDEYGGFLSTRIVEDYTNYAELLFQRFGDRVKFWITLNQPLSLALKGYGNGSYPP 227          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL28_ORYSJ (Beta-glucosidase 28 OS=Oryza sativa subsp. japonica GN=BGLU28 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 4.281e-43
Identity = 77/132 (58.33%), Postives = 100/132 (75.76%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXSKWVNKAC 396
            + ++  MN+D+FRFSI+WSR+LPNG +SGG+N +G+ FYN+LINE+++ GL+PFVTIFH+D PQALED YGGFLS  IV D+ DYA+LCF  FGDRVK W T NEP  +  NGY  G  AP   S + + +C
Sbjct:   88 LNLITAMNMDSFRFSIAWSRILPNGTISGGINKEGVEFYNSLINEVIAKGLKPFVTIFHFDTPQALEDKYGGFLSENIVKDYVDYADLCFSLFGDRVKLWNTFNEPTIFCMNGYATGIMAPGRCSPYASASC 219          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL23_ARATH (Beta-glucosidase 23 OS=Arabidopsis thaliana GN=BGLU23 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.246e-42
Identity = 73/133 (54.89%), Postives = 100/133 (75.19%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXSKWVNKACQ 399
            +++MK +N DAFR SI+W R+ P+G+   GV+  G+ FY++LI+EL+ NG+ PFVT+FHWD PQ LED+YGGFLS RIV DF++YA+  F+E+G +VKHWIT NEP  +S+ GY+ G  AP   S +VN  CQ
Sbjct:   99 IQLMKNLNTDAFRMSIAWPRIFPHGRKEKGVSQAGVQFYHDLIDELIKNGITPFVTVFHWDTPQDLEDEYGGFLSERIVKDFREYADFVFQEYGGKVKHWITFNEPWVFSHAGYDVGKKAPGRCSSYVNAKCQ 231          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL16_ARATH (Beta-glucosidase 16 OS=Arabidopsis thaliana GN=BGLU16 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.246e-42
Identity = 75/132 (56.82%), Postives = 96/132 (72.73%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXSKWVNKAC 396
            V ++ ++  DA+RFSISWSR+LP G L GG+N  GI +YNNLIN+L+S G++PFVT+FHWDLP ALE+ YGG L    V DF+DYAELCF++FGDRVK W TLNEP++  + GY  G  AP   S +    C
Sbjct:   95 VNLLHQIGFDAYRFSISWSRILPRGTLKGGINQAGIEYYNNLINQLISKGVKPFVTLFHWDLPDALENAYGGLLGDEFVNDFRDYAELCFQKFGDRVKQWTTLNEPYTMVHEGYITGQKAPGRCSNFYKPDC 226          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL26_ARATH (Beta-glucosidase 26, peroxisomal OS=Arabidopsis thaliana GN=BGLU26 PE=1 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 3.624e-42
Identity = 77/131 (58.78%), Postives = 100/131 (76.34%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXSKWVNKA 393
            +K MK++N+D+FR SI+W R+LP GK   GV+ +GI FYN++I+ELL+N + P VTIFHWD+PQ LED+YGGFLS +I+ DF+DYA LCF+ FGDRV  W T+NEP  YS  GY+ G  AP   SK+VN A
Sbjct:   79 IKRMKDINMDSFRLSIAWPRVLPYGKRDRGVSEEGIKFYNDVIDELLANEITPLVTIFHWDIPQDLEDEYGGFLSEQIIDDFRDYASLCFERFGDRVSLWCTMNEPWVYSVAGYDTGRKAPGRCSKYVNGA 209          
The following BLAST results are available for this feature:
BLAST of CK937823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 174
Match NameE-valueIdentityDescription
BGL27_ARATH7.803e-4561.83Beta-glucosidase 27 OS=Arabidopsis thaliana GN=BGL... [more]
BGL15_ARATH1.019e-4459.85Beta-glucosidase 15 OS=Arabidopsis thaliana GN=BGL... [more]
BGL14_ARATH1.331e-4460.61Beta-glucosidase 14 OS=Arabidopsis thaliana GN=BGL... [more]
BGL13_ARATH1.331e-4459.85Beta-glucosidase 13 OS=Arabidopsis thaliana GN=BGL... [more]
BGL34_ARATH1.127e-4362.81Myrosinase 4 OS=Arabidopsis thaliana GN=TGG4 PE=1 ... [more]
BGL35_ARATH3.278e-4362.81Myrosinase 5 OS=Arabidopsis thaliana GN=TGG5 PE=1 ... [more]
BGL28_ORYSJ4.281e-4358.33Beta-glucosidase 28 OS=Oryza sativa subsp. japonic... [more]
BGL23_ARATH1.246e-4254.89Beta-glucosidase 23 OS=Arabidopsis thaliana GN=BGL... [more]
BGL16_ARATH1.246e-4256.82Beta-glucosidase 16 OS=Arabidopsis thaliana GN=BGL... [more]
BGL26_ARATH3.624e-4258.78Beta-glucosidase 26, peroxisomal OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004481_D06 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0001_IIIF_D06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937823 ID=CK937823; Name=CK937823; organism=Citrus sinensis; type=EST; length=400bp
GTGAAGATTATGAAGGAAATGAATTTGGATGCTTTCAGATTCTCCATCTC
CTGGTCTAGATTATTACCAAATGGAAAGCTAAGTGGTGGAGTGAACAACA
AAGGCATTAGTTTCTACAATAATCTCATCAACGAGCTCCTCTCAAATGGA
TTGCAACCCTTTGTTACTATCTTTCACTGGGATCTTCCACAGGCCCTGGA
AGATGACTATGGTGGCTTTTTAAGCCCTCGCATTGTGGCTGATTTTCAAG
ACTATGCGGAGCTTTGCTTCAAAGAATTTGGTGATCGCGTAAAGCATTGG
ATCACTTTAAATGAGCCACATTCATACAGTAATAATGGCTATAATAAGGG
TACCGATGCACCANNANNNNGTTCCAAATGGGTAAACAAAGCATGCCAGG
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