CK937823

Overview
NameCK937823
Unique NameCK937823
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length400
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL37_ARATH (Myrosinase 2 OS=Arabidopsis thaliana GN=TGG2 PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 1.377e-41
Identity = 70/130 (53.85%), Postives = 98/130 (75.38%), Query Frame = 1
Query:    7 IMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXSKWVNKAC 396
            +M+E+ +  +RFS +WSR+LP GK S G+N  GI++Y+ LI+ L++  + PFVT+FHWDLPQ+L+D+Y GFL   I+ DF+DYA+LCF+ FGDRVKHWIT+N+  +    GY  GTDAP   S+WV+K C
Sbjct:  115 VMEELGVKGYRFSFAWSRILPKGKRSRGINEDGINYYSGLIDGLIARNITPFVTLFHWDLPQSLQDEYEGFLDRTIIDDFKDYADLCFERFGDRVKHWITINQLFTVPTRGYALGTDAPGRCSQWVDKRC 244          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL20_ARATH (Beta-glucosidase 20 OS=Arabidopsis thaliana GN=BGLU20 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 1.377e-41
Identity = 69/130 (53.08%), Postives = 98/130 (75.38%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXSKWVNK 390
            +K+MK +N D FRFSI+W R+ P+G++  G++  G+ +Y++LI+ELL+NG+ P VT+FHWD PQ LED+YGGFLS RI+ DF +YA   F+E+GD+VKHWIT NEP  +S  GY+ G  AP   SK++ +
Sbjct:  101 IKLMKNLNTDGFRFSIAWPRIFPHGRMEKGISKAGVQYYHDLIDELLANGITPLVTVFHWDTPQDLEDEYGGFLSDRIIKDFTEYANFTFQEYGDKVKHWITFNEPWVFSRAGYDIGNKAPGRCSKYIKE 230          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: MYRA_SINAL (Myrosinase MA1 OS=Sinapis alba PE=1 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 6.835e-41
Identity = 69/132 (52.27%), Postives = 97/132 (73.48%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXSKWVNKAC 396
            + ++ E+N   +RFSI+WSR++P GK S GVN KGI +Y+ LI+ L+  G+ PFVT+FHWDLPQ L+D+Y GFL P+I+ DF+DYA+LCF+EFGD VK+W+T+N+ +S    GY    DAP   S  V+ +C
Sbjct:   83 IDVLDELNATGYRFSIAWSRIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTLFHWDLPQTLQDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLTINQLYSVPTRGYGSALDAPGRCSPTVDPSC 214          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL25_ORYSJ (Beta-glucosidase 25 OS=Oryza sativa subsp. japonica GN=BGLU25 PE=2 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 1.523e-40
Identity = 72/125 (57.60%), Postives = 98/125 (78.40%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXS 375
            V++M ++ +DA+RFSISWSR+ PNG  +G  N +G+S+YN+LI+ LL  G++P+VT+FHWDLPQALED YGG+L+  I+ DF  YA  CFKEFGDRVKHWIT NEP++++ +GY+ G  AP   S
Sbjct:   84 VELMNDIGMDAYRFSISWSRIFPNG--TGEPNEEGLSYYNSLIDALLDKGIEPYVTLFHWDLPQALEDRYGGWLNSEIIEDFVQYAFTCFKEFGDRVKHWITFNEPYNFAIDGYDLGIQAPGRCS 206          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL06_ORYSJ (Beta-glucosidase 6 OS=Oryza sativa subsp. japonica GN=BGLU6 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 1.989e-40
Identity = 75/133 (56.39%), Postives = 98/133 (73.68%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXSKWVNKACQ 399
            +++M +M +DA+RFSI+WSR+ PNG   G VN  GI  YN LI+ LL+ G+QP+VT++HWDLPQALED Y G+L  +IV DF  YAE CF+EFGDRVKHWITLNEPH+ +  GY+ G  AP   S  ++  C+
Sbjct:  109 IQLMADMGMDAYRFSIAWSRIYPNGV--GQVNQAGIDHYNKLIDALLAKGIQPYVTLYHWDLPQALEDKYKGWLDRQIVDDFAAYAETCFREFGDRVKHWITLNEPHTVAIQGYDAGLQAPGRCSVLLHLYCK 239          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL32_ORYSJ (Beta-glucosidase 32 OS=Oryza sativa subsp. japonica GN=BGLU32 PE=2 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 2.597e-40
Identity = 72/125 (57.60%), Postives = 97/125 (77.60%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXS 375
            VK+M +M LDA+RFSI+W RL+P+G+  G +N KG+ +YNNLI+EL+ +G+QP VTI+H+DLPQAL+D+YGG LSPR + D+  YAE+CFK FGDRVKHW+T+NEP+     GY+ G   P   S
Sbjct:   94 VKLMYDMGLDAYRFSIAWPRLIPDGR--GEINPKGLEYYNNLIDELIMHGIQPHVTIYHFDLPQALQDEYGGILSPRFIEDYTAYAEVCFKNFGDRVKHWVTVNEPNIEPIGGYDAGVQPPRRCS 216          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL40_ARATH (Beta-glucosidase 40 OS=Arabidopsis thaliana GN=BGLU40 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 3.392e-40
Identity = 71/121 (58.68%), Postives = 94/121 (77.69%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAP 363
            V++MK M +DA+RFSISW+R+ PNG   G +N  GI  YN LIN LL+ G++P+VT++HWDLPQAL D Y G+L+P+I+ DF  YAE+CF+ FGDRVKHWIT NEPH+++  GY+ G  AP
Sbjct:   96 VQLMKNMGMDAYRFSISWTRIFPNGV--GHINEAGIDHYNKLINALLAKGIEPYVTLYHWDLPQALHDRYLGWLNPQIINDFAAYAEVCFQRFGDRVKHWITFNEPHTFAIQGYDVGLQAP 214          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL31_ORYSJ (Beta-glucosidase 31 OS=Oryza sativa subsp. japonica GN=BGLU31 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 2.199e-39
Identity = 73/125 (58.40%), Postives = 97/125 (77.60%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXS 375
            VK++++M +DA+R SISWSRL+P+G+  G VN KG+ +YNNLI+ELLS+G+QP VTI+H+D PQAL+D+Y G LSPR V DF  YA++CFK FGDRVKHW T+NEP+     GY++G   P   S
Sbjct:   93 VKLLQDMGVDAYRMSISWSRLIPDGR--GAVNPKGLEYYNNLIDELLSHGIQPHVTIYHFDFPQALQDEYNGILSPRFVEDFTAYADVCFKNFGDRVKHWSTVNEPNIEPIGGYDQGILPPRRCS 215          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL22_ARATH (Beta-glucosidase 22 OS=Arabidopsis thaliana GN=BGLU22 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 2.199e-39
Identity = 70/133 (52.63%), Postives = 100/133 (75.19%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXSKWVNKACQ 399
            +++MK +N DAFR SI+WSR+ P+G+   GV+  G+ FY++LI+ELL NG+ PFVT+FHWD PQ LED+YGGFLS  IV DF++YA+  F E+G +VK+WIT NEP  +++ GY+ G  AP   S+++ K C+
Sbjct:  100 IQLMKNLNTDAFRLSIAWSRIFPHGRKEKGVSQAGVKFYHDLIDELLKNGIIPFVTVFHWDTPQDLEDEYGGFLSENIVKDFREYADYVFTEYGGKVKNWITFNEPWVFAHAGYDVGKKAPGRCSRYL-KGCE 231          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL11_ARATH (Beta-glucosidase 11 OS=Arabidopsis thaliana GN=BGLU11 PE=2 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 2.199e-39
Identity = 73/125 (58.40%), Postives = 98/125 (78.40%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXS 375
            VK+M +M L+A+RFSISWSRLLP+G+  G +N KG+ +YNNLI+EL+++G+QP VT+ H+DLPQALED+YGG+LS  IV DF  YA+ CFKEFGDRV HW T+NE + ++  GY++G   P   S
Sbjct:   88 VKLMADMGLEAYRFSISWSRLLPSGR--GPINPKGLQYYNNLIDELITHGIQPHVTLHHFDLPQALEDEYGGWLSQEIVRDFTAYADTCFKEFGDRVSHWTTINEVNVFALGGYDQGITPPARCS 210          
The following BLAST results are available for this feature:
BLAST of CK937823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 174
Match NameE-valueIdentityDescription
BGL37_ARATH1.377e-4153.85Myrosinase 2 OS=Arabidopsis thaliana GN=TGG2 PE=1 ... [more]
BGL20_ARATH1.377e-4153.08Beta-glucosidase 20 OS=Arabidopsis thaliana GN=BGL... [more]
MYRA_SINAL6.835e-4152.27Myrosinase MA1 OS=Sinapis alba PE=1 SV=2[more]
BGL25_ORYSJ1.523e-4057.60Beta-glucosidase 25 OS=Oryza sativa subsp. japonic... [more]
BGL06_ORYSJ1.989e-4056.39Beta-glucosidase 6 OS=Oryza sativa subsp. japonica... [more]
BGL32_ORYSJ2.597e-4057.60Beta-glucosidase 32 OS=Oryza sativa subsp. japonic... [more]
BGL40_ARATH3.392e-4058.68Beta-glucosidase 40 OS=Arabidopsis thaliana GN=BGL... [more]
BGL31_ORYSJ2.199e-3958.40Beta-glucosidase 31 OS=Oryza sativa subsp. japonic... [more]
BGL22_ARATH2.199e-3952.63Beta-glucosidase 22 OS=Arabidopsis thaliana GN=BGL... [more]
BGL11_ARATH2.199e-3958.40Beta-glucosidase 11 OS=Arabidopsis thaliana GN=BGL... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004481_D06 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0001_IIIF_D06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937823 ID=CK937823; Name=CK937823; organism=Citrus sinensis; type=EST; length=400bp
GTGAAGATTATGAAGGAAATGAATTTGGATGCTTTCAGATTCTCCATCTC
CTGGTCTAGATTATTACCAAATGGAAAGCTAAGTGGTGGAGTGAACAACA
AAGGCATTAGTTTCTACAATAATCTCATCAACGAGCTCCTCTCAAATGGA
TTGCAACCCTTTGTTACTATCTTTCACTGGGATCTTCCACAGGCCCTGGA
AGATGACTATGGTGGCTTTTTAAGCCCTCGCATTGTGGCTGATTTTCAAG
ACTATGCGGAGCTTTGCTTCAAAGAATTTGGTGATCGCGTAAAGCATTGG
ATCACTTTAAATGAGCCACATTCATACAGTAATAATGGCTATAATAAGGG
TACCGATGCACCANNANNNNGTTCCAAATGGGTAAACAAAGCATGCCAGG
back to top