CK937823

Overview
NameCK937823
Unique NameCK937823
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length400
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL33_ORYSJ (Probable inactive beta-glucosidase 33 OS=Oryza sativa subsp. japonica GN=BGLU33 PE=2 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 1.091e-38
Identity = 70/125 (56.00%), Postives = 95/125 (76.00%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXS 375
            VK+M +M LDA+RFSI+W RL+P+G+  G +N KG+ +YNNLI+EL+ +G+QP VTI+H+DLPQAL+D+YGG LSPR + D+  YAE+CFK FGDRVKHW T N+P+     G++ G   P   S
Sbjct:   94 VKLMYDMGLDAYRFSIAWPRLIPDGR--GEINPKGLEYYNNLIDELIMHGIQPHVTIYHFDLPQALQDEYGGILSPRFIEDYSAYAEVCFKNFGDRVKHWATFNQPNIEPIGGFDAGDRPPRRCS 216          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGLC_MAIZE (Beta-glucosidase, chloroplastic OS=Zea mays GN=GLU1 PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 7.073e-38
Identity = 69/128 (53.91%), Postives = 93/128 (72.66%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLS---PRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXS 375
            V+++KEM +DA+RFSISW R+LP G   GG+N  GI +Y NLIN LL NG++P+VTIFHWD+PQALE+ YGGFL      IV D+  +A++CF  FGD+VK+W+T NEP ++++  Y  G  AP   S
Sbjct:  138 VRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVTIFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFNEPQTFTSFSYGTGVFAPGRCS 265          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: HIUH_SOYBN (Hydroxyisourate hydrolase OS=Glycine max GN=HIUH PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 5.988e-37
Identity = 71/125 (56.80%), Postives = 96/125 (76.80%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXS 375
            V++M E  LDA+RFSISWSRLLPNG+  G VN KG+ + NNLINEL+SNG+QP  T++++DLPQ LED+YGG++S  I+ DF  YAE+ F+EFGDRV +W T+NEP+ ++  GY++G   P   S
Sbjct:   97 VQLMLETGLDAYRFSISWSRLLPNGR--GPVNPKGLQYSNNLINELISNGIQPHATLYNFDLPQVLEDEYGGWISRDIIRDFTYYAEVEFREFGDRVLYWTTVNEPNVFALGGYDQGNSPPRRCS 219          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL02_ORYSJ (Beta-glucosidase 2 OS=Oryza sativa subsp. japonica GN=BGLU2 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.021e-36
Identity = 70/125 (56.00%), Postives = 93/125 (74.40%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXS 375
            VK+M E  L+A++FSISWSRL+PNG+  G VN +G+ +YNN+I+EL   G+QP + + H DLPQALED+Y G+LSPRIV DF  YA++CF+EFGDRV HW TL EP+  +  GY+ G  +P   S
Sbjct:   88 VKLMAETGLEAYKFSISWSRLIPNGR--GAVNQEGLKYYNNVIDELAKRGIQPHIMLCHLDLPQALEDEYDGWLSPRIVDDFTAYADVCFREFGDRVLHWTTLAEPNIAALGGYDTGVLSPGHCS 210          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL03_ARATH (Beta-glucosidase 3 OS=Arabidopsis thaliana GN=BGLU3 PE=2 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 1.334e-36
Identity = 70/125 (56.00%), Postives = 91/125 (72.80%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXS 375
            VK+M E  LDAFRFSISWSRL+PNG+  G VN KG+ FY N I EL+S+G++P VT+FH+D PQ LED+YGG+++ RI+ DF  YA +CF+EFG  VK W T+NE + ++  GYN G   P   S
Sbjct:   82 VKLMVETGLDAFRFSISWSRLIPNGR--GPVNPKGLQFYKNFIQELVSHGIEPHVTLFHYDHPQYLEDEYGGWINRRIIQDFTAYANVCFREFGHHVKFWTTINEANIFTIGGYNDGITPPGRCS 204          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL03_ORYSJ (Beta-glucosidase 3 OS=Oryza sativa subsp. japonica GN=BGLU3 PE=2 SV=2)

HSP 1 Score: 150.599 bits (379), Expect = 2.275e-36
Identity = 70/125 (56.00%), Postives = 92/125 (73.60%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXS 375
            VK+M E  L+A+RFSISWSRL+P+G+  G VN +G+ +YNN+I+EL   G+Q  V ++H DLPQALED+Y G+LSPRIV DF  YA++CF+EFGDRV HW  L EP+  +  GY+ G  AP   S
Sbjct:   87 VKLMTETGLEAYRFSISWSRLIPSGR--GAVNQQGLKYYNNIIDELTKRGIQVHVMLYHLDLPQALEDEYAGWLSPRIVEDFTAYADVCFREFGDRVSHWTILAEPNVAALGGYDTGEFAPGRCS 209          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL36_ARATH (Putative myrosinase 6 OS=Arabidopsis thaliana GN=TGG6 PE=2 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 3.881e-36
Identity = 69/121 (57.02%), Postives = 90/121 (74.38%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAP 363
            VK++K MN+ A+RFSI+WSR+LP G+L GGV+  GI++YNNLINEL +NG++PFVTIFHWD+PQ         L P   +DF++YAEL F+ FGDRVK WITLN+P+S +  GY  G   P
Sbjct:   82 VKLLKRMNVQAYRFSIAWSRVLPKGRLIGGVDENGITYYNNLINELKANGIEPFVTIFHWDVPQDFRRRIWRLLKP-TYSDFKNYAELLFQRFGDRVKFWITLNQPYSLAVKGYGDGQYPP 201          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL10_ARATH (Beta-glucosidase 10 OS=Arabidopsis thaliana GN=BGLU10 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 3.881e-36
Identity = 68/131 (51.91%), Postives = 100/131 (76.34%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXS--KWVN 387
            VK+M EM L++FRFSISWSRL+PNG+  G +N KG+ FY NLI EL+S+G++P VT++H+DLPQ+LED+YGG+++ +I+ DF  YA++CF+EFG+ VK W T+NE   ++   Y++G   P   S  K++N
Sbjct:   86 VKLMAEMGLESFRFSISWSRLIPNGR--GLINPKGLLFYKNLIKELISHGIEPHVTLYHYDLPQSLEDEYGGWINRKIIEDFTAYADVCFREFGEDVKLWTTINEATIFAIGSYDQGISPPGHCSPNKFIN 214          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL35_ORYSJ (Putative beta-glucosidase 35 OS=Oryza sativa subsp. japonica GN=BGLU35 PE=3 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 5.069e-36
Identity = 68/136 (50.00%), Postives = 94/136 (69.12%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGF----LSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXSKWVNKAC 396
            V ++K+MN+DAFRFSI+W+R+LPNG LSGG+N +G++FYN+LIN++++ G+ PFVTIFHWD P               S     D+ D+AE+CF EFGDRVK+W T NEP +YS  GY  G  A    + +V+K+C
Sbjct:   93 VNLLKDMNMDAFRFSIAWTRILPNGSLSGGINREGVAFYNSLINDVIAKGMIPFVTIFHWDTPPGSGKQIRRLPERKHSNMHEKDYADFAEVCFHEFGDRVKYWTTFNEPFTYSAYGYGGGVFASGRCAPYVSKSC 228          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL09_ARATH (Beta-glucosidase 9 OS=Arabidopsis thaliana GN=BGLU9 PE=2 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 6.621e-36
Identity = 69/131 (52.67%), Postives = 100/131 (76.34%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXS--KWVN 387
            VK+M  M L++FRFSISWSRL+PNG+  G +N KG+ FYNNLI +L S+G++P VT++H+DLPQ+LED+YGG+++ +I+ DF  YA++CF+EFG+ VK W T+NE   ++   Y++GT  P   S  K+VN
Sbjct:   83 VKLMATMGLESFRFSISWSRLIPNGR--GLINPKGLLFYNNLIKDLKSHGIEPHVTLYHYDLPQSLEDEYGGWINRKIIEDFTAYADVCFREFGEDVKLWTTINEATIFAIGSYDQGTAPPGHCSPNKFVN 211          
The following BLAST results are available for this feature:
BLAST of CK937823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 174
Match NameE-valueIdentityDescription
BGL33_ORYSJ1.091e-3856.00Probable inactive beta-glucosidase 33 OS=Oryza sat... [more]
BGLC_MAIZE7.073e-3853.91Beta-glucosidase, chloroplastic OS=Zea mays GN=GLU... [more]
HIUH_SOYBN5.988e-3756.80Hydroxyisourate hydrolase OS=Glycine max GN=HIUH P... [more]
BGL02_ORYSJ1.021e-3656.00Beta-glucosidase 2 OS=Oryza sativa subsp. japonica... [more]
BGL03_ARATH1.334e-3656.00Beta-glucosidase 3 OS=Arabidopsis thaliana GN=BGLU... [more]
BGL03_ORYSJ2.275e-3656.00Beta-glucosidase 3 OS=Oryza sativa subsp. japonica... [more]
BGL36_ARATH3.881e-3657.02Putative myrosinase 6 OS=Arabidopsis thaliana GN=T... [more]
BGL10_ARATH3.881e-3651.91Beta-glucosidase 10 OS=Arabidopsis thaliana GN=BGL... [more]
BGL35_ORYSJ5.069e-3650.00Putative beta-glucosidase 35 OS=Oryza sativa subsp... [more]
BGL09_ARATH6.621e-3652.67Beta-glucosidase 9 OS=Arabidopsis thaliana GN=BGLU... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004481_D06 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0001_IIIF_D06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937823 ID=CK937823; Name=CK937823; organism=Citrus sinensis; type=EST; length=400bp
GTGAAGATTATGAAGGAAATGAATTTGGATGCTTTCAGATTCTCCATCTC
CTGGTCTAGATTATTACCAAATGGAAAGCTAAGTGGTGGAGTGAACAACA
AAGGCATTAGTTTCTACAATAATCTCATCAACGAGCTCCTCTCAAATGGA
TTGCAACCCTTTGTTACTATCTTTCACTGGGATCTTCCACAGGCCCTGGA
AGATGACTATGGTGGCTTTTTAAGCCCTCGCATTGTGGCTGATTTTCAAG
ACTATGCGGAGCTTTGCTTCAAAGAATTTGGTGATCGCGTAAAGCATTGG
ATCACTTTAAATGAGCCACATTCATACAGTAATAATGGCTATAATAAGGG
TACCGATGCACCANNANNNNGTTCCAAATGGGTAAACAAAGCATGCCAGG
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