CK937823

Overview
NameCK937823
Unique NameCK937823
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length400
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL39_ARATH (Putative myrosinase 3 OS=Arabidopsis thaliana GN=TGG3 PE=5 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 3.633e-34
Identity = 62/121 (51.24%), Postives = 86/121 (71.07%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAP 363
            + +M E+ +D +RFS++WSR+ P        N  G+ +YN+LI+ LL+  + PFVT+FHWDLPQ L+D+Y GFL+  I+ DF+DYA LCFK FGDRVK WIT+N+ ++    GY  GTDAP
Sbjct:   92 IDVMTELGVDGYRFSLAWSRIAPRES-----NQAGVKYYNDLIDGLLAKNITPFVTLFHWDLPQVLQDEYEGFLNHEIIDDFKDYANLCFKIFGDRVKKWITINQLYTVPTRGYAMGTDAP 207          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL19_ORYSJ (Beta-glucosidase 19 OS=Oryza sativa subsp. japonica GN=BGLU19 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 4.745e-34
Identity = 64/125 (51.20%), Postives = 92/125 (73.60%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXS 375
            V +M E  L+A+RF+ISWSRL+P+G+  G VN KG+ FYN++INEL+  G+Q    ++H DLPQ+L+D+YGG++SP++V DF  YA++CF+EFGDRV HW T  EP+  + +GY+ G   P   S
Sbjct:  107 VMLMNETGLEAYRFTISWSRLIPSGR--GAVNPKGLQFYNSMINELVKAGIQIHAVLYHIDLPQSLQDEYGGWVSPKVVDDFAAYADVCFREFGDRVAHWTTSIEPNVMAQSGYDDGYLPPNRCS 229          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL01_ARATH (Beta-glucosidase 1 OS=Arabidopsis thaliana GN=BGLU1 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.057e-33
Identity = 63/125 (50.40%), Postives = 87/125 (69.60%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXS 375
            V++M E  L  FRFSISWSRL+ NG+  G +N KG+ FY N I EL+ +G++P VT+ H+D PQ LEDDYGG+ + +I+ DF  YA++CF+EFG+ VK W T+NE + ++  GYN G   P   S
Sbjct:   89 VQLMAETGLHTFRFSISWSRLISNGR--GSINPKGLQFYKNFIQELVKHGIEPHVTLHHYDFPQYLEDDYGGWTNRKIIKDFTAYADVCFREFGNHVKFWTTINEANIFTIGGYNDGNSPPGRCS 211          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL08_ARATH (Beta-glucosidase 8 OS=Arabidopsis thaliana GN=BGLU8 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.380e-33
Identity = 63/116 (54.31%), Postives = 91/116 (78.45%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNK 348
            VK+M EM L++FRFSISWSRL+PNG+  G +N KG+ FY NLI EL S+G++P VT++H+DLPQ+LED+YGG+++ +I+ DF  +A++CF+EFG+ VK W T+NE   ++   Y K
Sbjct:   83 VKLMAEMGLESFRFSISWSRLIPNGR--GRINPKGLLFYKNLIKELRSHGIEPHVTLYHYDLPQSLEDEYGGWINHKIIEDFTAFADVCFREFGEDVKLWTTINEATIFAFAFYGK 196          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL26_ORYSJ (Beta-glucosidase 26 OS=Oryza sativa subsp. japonica GN=BGLU26 PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 2.355e-33
Identity = 64/125 (51.20%), Postives = 85/125 (68.00%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXS 375
            V IMK M  DA+RFSISWSR+ PNG  +G VN +G+ +YN LI+ ++  G++P+  ++H+DLP AL + Y G+LSP IV  F DYA+ CF+ FGDRVK W T NEP   +  GY+ G  AP   S
Sbjct:  104 VNIMKNMGFDAYRFSISWSRIFPNG--TGMVNQEGVDYYNRLIDYMVKKGIKPYANLYHYDLPLALHEQYLGWLSPNIVEAFADYADFCFQTFGDRVKDWFTFNEPRCVAALGYDNGFHAPGRCS 226          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL18_ORYSJ (Beta-glucosidase 18 OS=Oryza sativa subsp. japonica GN=BGLU18 PE=2 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 3.075e-33
Identity = 65/125 (52.00%), Postives = 88/125 (70.40%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXS 375
            V++M  + ++A+RFSISWSR+LP G+  GGVN  GI FYN LI+ +L  G+QPFVT+ H+D+PQ LED YG +L+  I +DF  +A++CF  FGDRVK+W T NEP+    +GY  GT  P   S
Sbjct:   91 VELMNSLGVNAYRFSISWSRILPKGRF-GGVNPAGIDFYNKLIDSILLKGIQPFVTLTHYDIPQELEDRYGAWLNAEIQSDFGHFADVCFGAFGDRVKYWTTFNEPNVAVRHGYMLGTYPPSRCS 214          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL23_ORYSJ (Putative beta-glucosidase 23 OS=Oryza sativa subsp. japonica GN=BGLU23 PE=5 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 6.851e-33
Identity = 66/140 (47.14%), Postives = 95/140 (67.86%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELL--------SNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXSKWVNKAC 396
            VK+M +  L+A+RFSISWSRL+P G+  G +N KG+ +YN+LI++L+        S G++  VT++H D PQAL+D+Y G+LSPRI+ DF  YA++CF+EFGD V+HW T+ EP+  S  GY+ G   P   S     +C
Sbjct:  152 VKLMSDTGLEAYRFSISWSRLIPRGR--GPINPKGLEYYNDLIDKLVKRGEICDCSMGIEIHVTLYHLDFPQALQDEYNGWLSPRIIEDFTAYADVCFREFGDLVRHWTTVGEPNVLSIAGYDSGVIPPCRCSPPFGTSC 289          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL07_ARATH (Beta-glucosidase 7 OS=Arabidopsis thaliana GN=BGLU7 PE=2 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 1.526e-32
Identity = 61/117 (52.14%), Postives = 89/117 (76.07%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKG 351
            V +M EM L++FRFSISWSRL+PNG+  G +N KG+ FY NLI EL S+G++P VT++H+DLPQ+LED+YGG+++ +I+ DF  +A++CF+EFG+ VK W  +NE   ++   Y  G
Sbjct:   84 VMLMAEMGLESFRFSISWSRLIPNGR--GRINPKGLLFYKNLIKELRSHGIEPQVTLYHYDLPQSLEDEYGGWINRKIIEDFTAFADVCFREFGEDVKLWTKINEATLFAIGSYGDG 198          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL1A_PHACH (Beta-glucosidase 1A OS=Phanerochaete chrysosporium GN=BGL1A PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.993e-32
Identity = 64/126 (50.79%), Postives = 85/126 (67.46%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLS-PRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXS 375
            V+++K   + A+RFS+SWSR++P G  S  VN  GI  Y  LI EL+  G+ PFVT++HWDLPQAL+D YGG+L+    + DF +YA+LCF+ FGD V++WIT NEP   S  GY  G  AP   S
Sbjct:   65 VQLLKSYGVKAYRFSLSWSRIIPKGGRSDPVNGAGIKHYRTLIEELVKEGITPFVTLYHWDLPQALDDRYGGWLNKEEAIQDFTNYAKLCFESFGDLVQNWITFNEPWVISVMGYGNGIFAPGHVS 190          
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGL42_ARATH (Beta-glucosidase 42 OS=Arabidopsis thaliana GN=BGLU42 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 3.400e-32
Identity = 66/126 (52.38%), Postives = 87/126 (69.05%), Query Frame = 1
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAPXXXSK 378
            V ++ ++   A+RFSISWSR+ P+G L   VN +GI+FYN+LIN LL  G+QP+VT++HWDLP  L++  GG+ + +IV  F  YA+ CF  FGDRVKHWITLNEP   S NG+  G  AP    K
Sbjct:   80 VDLIGQLGFGAYRFSISWSRIFPDG-LGTEVNEEGIAFYNDLINTLLEKGIQPYVTLYHWDLPSHLQEAIGGWTNRKIVDYFGLYADACFANFGDRVKHWITLNEPLQTSVNGHCIGIFAPGRNEK 204          
The following BLAST results are available for this feature:
BLAST of CK937823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 174
Match NameE-valueIdentityDescription
BGL39_ARATH3.633e-3451.24Putative myrosinase 3 OS=Arabidopsis thaliana GN=T... [more]
BGL19_ORYSJ4.745e-3451.20Beta-glucosidase 19 OS=Oryza sativa subsp. japonic... [more]
BGL01_ARATH1.057e-3350.40Beta-glucosidase 1 OS=Arabidopsis thaliana GN=BGLU... [more]
BGL08_ARATH1.380e-3354.31Beta-glucosidase 8 OS=Arabidopsis thaliana GN=BGLU... [more]
BGL26_ORYSJ2.355e-3351.20Beta-glucosidase 26 OS=Oryza sativa subsp. japonic... [more]
BGL18_ORYSJ3.075e-3352.00Beta-glucosidase 18 OS=Oryza sativa subsp. japonic... [more]
BGL23_ORYSJ6.851e-3347.14Putative beta-glucosidase 23 OS=Oryza sativa subsp... [more]
BGL07_ARATH1.526e-3252.14Beta-glucosidase 7 OS=Arabidopsis thaliana GN=BGLU... [more]
BGL1A_PHACH1.993e-3250.79Beta-glucosidase 1A OS=Phanerochaete chrysosporium... [more]
BGL42_ARATH3.400e-3252.38Beta-glucosidase 42 OS=Arabidopsis thaliana GN=BGL... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004481_D06 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0001_IIIF_D06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937823 ID=CK937823; Name=CK937823; organism=Citrus sinensis; type=EST; length=400bp
GTGAAGATTATGAAGGAAATGAATTTGGATGCTTTCAGATTCTCCATCTC
CTGGTCTAGATTATTACCAAATGGAAAGCTAAGTGGTGGAGTGAACAACA
AAGGCATTAGTTTCTACAATAATCTCATCAACGAGCTCCTCTCAAATGGA
TTGCAACCCTTTGTTACTATCTTTCACTGGGATCTTCCACAGGCCCTGGA
AGATGACTATGGTGGCTTTTTAAGCCCTCGCATTGTGGCTGATTTTCAAG
ACTATGCGGAGCTTTGCTTCAAAGAATTTGGTGATCGCGTAAAGCATTGG
ATCACTTTAAATGAGCCACATTCATACAGTAATAATGGCTATAATAAGGG
TACCGATGCACCANNANNNNGTTCCAAATGGGTAAACAAAGCATGCCAGG
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