CK937805
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937805 vs. ExPASy Swiss-Prot
Match: UBC6_DEBHA (Ubiquitin-conjugating enzyme E2 6 OS=Debaryomyces hansenii GN=UBC6 PE=3 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.432e-12 Identity = 37/113 (32.74%), Postives = 60/113 (53.10%), Query Frame = 1 Query: 52 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLT 381 + KR+ KE K + +PP SA P E++ W I GPP +P+ G + + FP +YPFKPP ++ T + N +CL D + W+PA +++ +L + S +T Sbjct: 6 SQKRLTKEYKAITLNPPPYVSAKPNDENILEWHYVITGPPHTPFEEGQYHGILRFPSEYPFKPPSISMITP--NGRFACNTRLCLSMSDYHPDTWNPAWSVATILTGLLSFMT 116
BLAST of CK937805 vs. ExPASy Swiss-Prot
Match: Y1A1_ENCCU (Probable ubiquitin-conjugating enzyme E2 ECU01_1010 OS=Encephalitozoon cuniculi GN=ECU01_1010 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.442e-12 Identity = 35/107 (32.71%), Postives = 56/107 (52.34%), Query Frame = 1 Query: 172 DSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL--------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKY 450 DS YAG + + FP YP +PP + F +K+FHPNI +G +C+ IL K++W+P I +++SI +L PN P + + MY+ + +Y Sbjct: 77 DSLYAGRILKAVMKFPSSYPLRPPTLKFVSKMFHPNIYEDGKMCISILEEDKQQDSSVFGDPKDKWTPVQNIRTIVMSIVVILNSPNISSPANVDASVMYRDNPEEY 183
BLAST of CK937805 vs. ExPASy Swiss-Prot
Match: UB2J2_MOUSE (Ubiquitin-conjugating enzyme E2 J2 OS=Mus musculus GN=Ube2j2 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.189e-12 Identity = 36/126 (28.57%), Postives = 65/126 (51.59%), Query Frame = 1 Query: 25 SSRKRSLFMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLTDPNP 393 +S KR+ A++R+ ++ ++KDP A P+ ++ W + GP +PY GG + + FP ++PFKPP + T + N +CL D + W+PA ++S +L + S + + P Sbjct: 4 NSNKRAPTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGP 127
BLAST of CK937805 vs. ExPASy Swiss-Prot
Match: UBC17_CAEEL (Probable ubiquitin-conjugating enzyme protein 17 OS=Caenorhabditis elegans GN=ubc-17 PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 4.166e-12 Identity = 46/122 (37.70%), Postives = 64/122 (52.46%), Query Frame = 1 Query: 55 SKRILKELKDLQKDPPTSCSAGPVA------EDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTK-----VFHPNINSNGSICLDIL-------KEQWSPALTISKVLLSI 366 +KRI KEL + P + S D+ + I GP D+PYA G+F I FP YPF PPK AF T F+PN+ ++G ICL IL +E+W+P ++ +VL+SI Sbjct: 411 TKRIAKELASIANALPLNASNSIYVCYDEGRVDII--KVLISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSILGTWEGRPEEKWNPYCSLMQVLVSI 530
BLAST of CK937805 vs. ExPASy Swiss-Prot
Match: UB2J2_HUMAN (Ubiquitin-conjugating enzyme E2 J2 OS=Homo sapiens GN=UBE2J2 PE=1 SV=3) HSP 1 Score: 72.0182 bits (175), Expect = 4.166e-12 Identity = 36/126 (28.57%), Postives = 65/126 (51.59%), Query Frame = 1 Query: 25 SSRKRSLFMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLTDPNP 393 +S KR+ A++R+ ++ ++KDP A P+ ++ W + GP +PY GG + + FP ++PFKPP + T + N +CL D + W+PA ++S +L + S + + P Sbjct: 4 TSSKRAPTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGP 127
BLAST of CK937805 vs. ExPASy Swiss-Prot
Match: UBC12_CAEEL (NEDD8-conjugating enzyme ubc-12 OS=Caenorhabditis elegans GN=ubc-12 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.440e-12 Identity = 44/136 (32.35%), Postives = 64/136 (47.06%), Query Frame = 1 Query: 97 PPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKTDKAKYESTARSWTQKY 483 P TSC H + P + Y GG F I PP+Y PP V TKV+HPNIN +GSICL IL++ W P ++ V+ + SL D + +D L + A M+ ++ + R + +Y Sbjct: 53 PSTSC---------LHELELTVTPQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILRQNSLDQYGWRPTRNLTDVVHGLVSLFNDLMDFNDALNIQAAQMWSQNRESFNHRVREYISRY 179
BLAST of CK937805 vs. ExPASy Swiss-Prot
Match: UB2J2_BOVIN (Ubiquitin-conjugating enzyme E2 J2 OS=Bos taurus GN=UBE2J2 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.105e-12 Identity = 36/126 (28.57%), Postives = 65/126 (51.59%), Query Frame = 1 Query: 25 SSRKRSLFMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLTDPNP 393 +S KR+ A++R+ ++ ++KDP A P+ ++ W + GP +PY GG + + FP ++PFKPP + T + N +CL D + W+PA ++S +L + S + + P Sbjct: 4 NSVKRAPTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGP 127 The following BLAST results are available for this feature:
BLAST of CK937805 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 267
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937805 ID=CK937805; Name=CK937805; organism=Citrus sinensis; type=EST; length=786bpback to top |