CK937772
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937772 vs. ExPASy Swiss-Prot
Match: RL18_PYRAE (50S ribosomal protein L18P OS=Pyrobaculum aerophilum GN=rpl18p PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 8.813e-19 Identity = 72/232 (31.03%), Postives = 105/232 (45.26%), Query Frame = 1 Query: 103 RFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTSYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQTHFTEYIKKGIDADGLEALYKKVHAAI 798 R++V ++RRREG T+YR R +L+ K R VVR TNK IIAQIV A GD + A L ++G + AAAY GL++ + A RR A+LD+GL + G RVF IPH G+++ + R I G HVA Y L E+ PE Y+ F+ Y+++G++ + L +++V I Sbjct: 6 RYKVPFRRRREGLTNYRKRRKLLLSKKP-------RLVVRKTNKHIIAQIVVAKPQGDVTIVGADTRILAKFGWRGDENNVAAAYLLGLVVGYK--------------------------ARARRVEEAILDIGLHRPAPGARVFAVLKGALDAGLKIPH-----------GEEVLPDEDR--IKGKHVAEYAEKLKEENPEAYKARFSRYLQRGLEPEKLPEHFEEVKKKI 191
BLAST of CK937772 vs. ExPASy Swiss-Prot
Match: RL18_METTH (50S ribosomal protein L18P OS=Methanobacterium thermoautotrophicum GN=rpl18p PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.151e-18 Identity = 69/236 (29.24%), Postives = 109/236 (46.19%), Query Frame = 1 Query: 91 AYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTSYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQTHFTEYIKKGIDADGLEALYKKVHAAI 798 A+ R+++ ++RRREGKTDYRAR +++ T K R VVR T +IAQI++ + GD L +A++ +L + G G ++ AAAY TG L +R LK EG E A+LD+GL G++VF +PH + S+ I G H+ Y +L E+E K F++Y+++G+ L + ++ I Sbjct: 2 AHGPRYKLAFRRRREGKTDYRARYKMVE-------TGKSRLVVRITTYHVIAQIINVGMNGDETLVSAHSKQLQKMGWLGGTSNTAAAYLTGYLCGKRALK--------EGIEE------------------AVLDIGLRPAIRGSKVFAALKGAVDAGLNVPHGESVLPDESR-------------IRGEHIMEYAESLDEEELRK---RFSKYLERGLSPVDLPEHFDEIKKRI 188
BLAST of CK937772 vs. ExPASy Swiss-Prot
Match: RL18_METJA (50S ribosomal protein L18P OS=Methanocaldococcus jannaschii GN=rpl18p PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.151e-18 Identity = 66/231 (28.57%), Postives = 107/231 (46.32%), Query Frame = 1 Query: 106 FQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTSYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQTHFTEYIKKGIDADGLEALYKKVHAAI 798 ++VK++RRRE KTDYR R++L+ K R V R T IAQIV + GD + +A++ EL + G + + +AY TG LL ++ L +G EA +LD+GL + T GN +F IPH ++ + I G H+ AY L E + E+Y+ F++Y++KG++ + L ++++ A I Sbjct: 7 YRVKFRRRREAKTDYRKRLKLLLSRKP-------RLVARRTLNHCIAQIVLYDEKGDKTVVSAHSRELIKLGYKGHTGNLPSAYLTGYLLGKKALA--------KGYTEA------------------VLDIGLHRATKGNAIFAILKGALDAGMEIPHGEEILPSEER-------------IRGEHIKAYAEMLKEQDEERYKKQFSKYLEKGLEPEKLPEHFEEIKAKI 191
BLAST of CK937772 vs. ExPASy Swiss-Prot
Match: RL18_THENV (50S ribosomal protein L18P OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rpl18p PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.713e-18 Identity = 70/232 (30.17%), Postives = 104/232 (44.83%), Query Frame = 1 Query: 103 RFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTSYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQTHFTEYIKKGIDADGLEALYKKVHAAI 798 R++V ++RRREG T+YR R RLI K R VVR TNK IIAQ+V A GD + L ++G + +AAY GL+ Y+ + E A+LD+GL + G+RVF IPH G+++ E R + G HVA Y + L E+ PE Y+ F+ Y+++G+ + L +++V I Sbjct: 6 RYKVPFRRRREGLTNYRKRRRLILSRKP-------RLVVRKTNKHIIAQVVVAKPQGDVTIVGVDTRALAKFGWRGDENNTSAAYLLGLVAG------------YKARLRGVRE--------------AVLDIGLHRPVAGSRVFAVLKGALDAGLEIPH-----------GEEVLPEDDR--VSGKHVAEYAAKLKEENPELYKARFSRYLQRGVQPEDLPKHFEEVKKKI 191
BLAST of CK937772 vs. ExPASy Swiss-Prot
Match: RL18_METS5 (50S ribosomal protein L18P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rpl18p PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.662e-17 Identity = 67/238 (28.15%), Postives = 104/238 (43.70%), Query Frame = 1 Query: 91 AYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTSYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQTHFTEYIKKGIDADGLEALYKKVHAAIRA 804 A+ ++VKY+RRREGKT+Y R + + R VVR TNK +I Q V + GD +AAA++ EL ++G + + A Y TG L R K G A+ D+GL T G R+F +P D V+ + G H+A Y L +++P+KY+ F+ Y+ +G+D L A +K+V +I++ Sbjct: 2 AHGPNYKVKYRRRREGKTNYYRRYTYVLNRSD-------RVVVRLTNKYVIVQFVKFDPKGDITVAAAHSRELMKFGWKGDENNSTACYLTGYLAGLRAKK--------AGMTSASA------------------DLGLFTPTKGARIFYVLKGVIDSGVKVPMG--------------DVGVNNDRLAGKHIAEYAKKLEQEDPDKYRGLFSRYLARGLDPKDLPAHFKEVLNSIKS 192
BLAST of CK937772 vs. ExPASy Swiss-Prot
Match: RL18_CALMQ (50S ribosomal protein L18P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rpl18p PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.662e-17 Identity = 66/235 (28.09%), Postives = 112/235 (47.66%), Query Frame = 1 Query: 103 RFQVKYKRRREGKTD-YRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHEL-PRYGLEVGLTSYAAAYCTGLLLARRVL-KMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQTHFTEYIKKGIDADGLEALYKKVHAAI 798 R++VK++RRREGKTD Y+ RI +I + K R VVRF+N+ ++AQ++ + GD +A A + EL ++G G + AAY GLL+ R L K +++ A+LDVGL + T G R+F +PH + + + + G H+A Y + L + PE Y+ F++Y+ +G++ + + ++V + I Sbjct: 6 RYKVKFRRRREGKTDYYKRRIMVI--------SGKPRLVVRFSNRYVLAQVIVSAPQGDFTVAEASSRELVKKFGWLGGTGNTPAAYLVGLLIGYRALSKGIKL---------------------------AVLDVGLHRVTKGGRLFAVVKGAVDAGLEVPHDE-------------EVQPSEDRLNGEHIAQYAADLKQSNPELYKIRFSKYLARGLEPENISKHIEEVKSKI 192
BLAST of CK937772 vs. ExPASy Swiss-Prot
Match: RL18_STAMF (50S ribosomal protein L18P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rpl18p PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.835e-17 Identity = 73/229 (31.88%), Postives = 103/229 (44.98%), Query Frame = 1 Query: 103 RFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHEL-PRYGLEVGLTSYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQTHFTEYIKKGIDADGLEALYKKV 786 R++V +RRREGKT+Y R +++ RFVVR T K II QIV+A GD +AAA++ EL +YG GL + AAY TGLL A R LK G Y+V D+GL T G +VF +P ++ + I G H+A++ L E PE Y+ F++YI +G D L +++V Sbjct: 6 RYKVPKRRRREGKTNYYKRYKMVLSGHP-------RFVVRKTLKHIIVQIVTAKPEGDITIAAAHSRELYKKYGWMGGLGNTPAAYLTGLLAALRGLK--------------AGIKYAVP------------DIGLHVPTRGAKVFAAIKAANDVGLKVPVGEEVVPSDDR-------------IRGEHIASWAKMLQEASPEAYERFFSKYISRGFDPTQLPTHFEEV 188
BLAST of CK937772 vs. ExPASy Swiss-Prot
Match: RL18_PYRIL (50S ribosomal protein L18P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rpl18p PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.835e-17 Identity = 65/232 (28.02%), Postives = 102/232 (43.97%), Query Frame = 1 Query: 103 RFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTSYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQTHFTEYIKKGIDADGLEALYKKVHAAI 798 R++V ++RRREG T+YR R +L+ K R VVR TNK IIAQ+V A GD + L ++G + + AAY GL++ Y+ + E A+LD+GL + G+RVF IPH ++ + I G H+A Y L ++ PE Y+T F+ Y+++G+ + L +++V I Sbjct: 6 RYKVPFRRRREGLTNYRKRRKLLLSKKP-------RLVVRKTNKHIIAQVVVAKPQGDVTIVGIDTRALAKFGWKGDENNTPAAYLLGLIVG------------YKARIRGVKE--------------AVLDIGLHRPVAGSRVFAVLKGALDAGLEIPHGEEIIPSDDR-------------ISGKHIAEYAEKLKKENPELYKTRFSRYLQRGLAPEELPTHFEEVKKKI 191
BLAST of CK937772 vs. ExPASy Swiss-Prot
Match: RL18_AERPE (50S ribosomal protein L18P OS=Aeropyrum pernix GN=rpl18p PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.835e-17 Identity = 70/233 (30.04%), Postives = 104/233 (44.64%), Query Frame = 1 Query: 103 RFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHEL-PRYGLEVGLTSYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQTHFTEYIKKGIDADGLEALYKKVHAAI 798 R++V +RRREGKT+Y R RL+ K R VR +N+ + Q + A I GD V+AAA++ EL ++G + + AAY TG L R L+ + A+LDVGL K G+RVF IPHS++ G D V + H+A + L E+ E YQ F+ Y+ +G++ + L ++V AI Sbjct: 6 RYRVPLRRRREGKTNYYRRFRLVKSGKP-------RMAVRISNEYLWVQFLEARIEGDRVIAAAHSRELIKKFGWKGDGNNTCAAYLTGYLAGLRALE--------------------------KGVREAVLDVGLHKPVKGSRVFAALKGALDAGVEIPHSEEILPG--------DERVRCE-----HIAQWAEALKEENAELYQRQFSRYLDRGLNPEELPGHVEEVKKAI 192
BLAST of CK937772 vs. ExPASy Swiss-Prot
Match: RL18_PYRCJ (50S ribosomal protein L18P OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rpl18p PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.703e-17 Identity = 66/232 (28.45%), Postives = 103/232 (44.40%), Query Frame = 1 Query: 103 RFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTSYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQTHFTEYIKKGIDADGLEALYKKVHAAI 798 R++V ++RRREG T+YR R +L+ K R VVR TNK +IAQIV A GD + L ++G + + +AAY GL++ Y+ + E A+LD+GL + T G RVF +PH + + + I G HVA Y L E+ PE Y+ F+ Y+++G+ + L + +++V I Sbjct: 6 RYKVPFRRRREGVTNYRKRRKLLLSRKP-------RLVVRKTNKHLIAQIVIARPHGDETVVGLDTRVLSKFGWKGDENNTSAAYLLGLIVG------------YKARAKGIKE--------------AILDIGLHRPTPGARVFAVMKGVIDAGVEVPHGE-------------EVVPSEERIRGEHVAEYAKRLKEEAPEAYKARFSRYLQRGLPPEELPSHFEEVKKKI 191 The following BLAST results are available for this feature:
BLAST of CK937772 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 96
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937772 ID=CK937772; Name=CK937772; organism=Citrus sinensis; type=EST; length=846bpback to top |