CK937772
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK937772 vs. ExPASy Swiss-Prot
Match: RL18_NATPD (50S ribosomal protein L18P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rpl18p PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.044e-11 Identity = 55/196 (28.06%), Postives = 81/196 (41.33%), Query Frame = 1 Query: 103 RFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTSYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTL 690 R+ V +RRRE +T+Y R+RL+ K R V R +N AQ+V GD +A+A + +L +G E + AAY TGLL +R ++ G D A+LD+GL T GN+VF +PH++ FA + + G H+A Y L Sbjct: 6 RYTVPMRRRREARTNYHQRLRLLKSGKP-------RLVARKSNNQTKAQLVVTGPQGDETVASATSADLEAFGWEAPTGNLPAAYLTGLLAGKRAIE--------------AGLD------------EAVLDIGLNTATPGNKVFAVQEGVIDAGLEVPHNEDVFADWQR-------------TRGAHIAEYAEQL 155
BLAST of CK937772 vs. ExPASy Swiss-Prot
Match: RL18_SULIY (50S ribosomal protein L18P OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rpl18p PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.780e-11 Identity = 58/234 (24.79%), Postives = 102/234 (43.59%), Query Frame = 1 Query: 106 FQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHEL-PRYGLEVGLTSYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQTHFTEYIKKGIDADGLEALYKKVHAAIRA 804 +++K +RRREGKT+Y R + + + RF+VR TNK +I QI + GD ++A+A++ EL ++ + + +AY TG L A R +K +G E + D+GL + GN+VF IP D + I G H+A Y L + + Y F+ Y+ +G++ + L + ++++ I++ Sbjct: 7 YKIKPRRRREGKTNYYKRYVYVI-------SKQIRFIVRITNKYVIVQIAKIDPKGDIMVASAHSSELTKKFEWKGDENNTPSAYLTGYLAALRAVK--------KGVTE------------------CVADIGLHVPSKGNKVFYAIKGAIDAGLKIPIG--------------DISIENDRIKGEHIAKYAEKLKSENLDLYNKLFSRYLGRGLNPENLPSHFEEILNKIKS 193
BLAST of CK937772 vs. ExPASy Swiss-Prot
Match: RL18_SULIM (50S ribosomal protein L18P OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rpl18p PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.780e-11 Identity = 58/234 (24.79%), Postives = 102/234 (43.59%), Query Frame = 1 Query: 106 FQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHEL-PRYGLEVGLTSYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQTHFTEYIKKGIDADGLEALYKKVHAAIRA 804 +++K +RRREGKT+Y R + + + RF+VR TNK +I QI + GD ++A+A++ EL ++ + + +AY TG L A R +K +G E + D+GL + GN+VF IP D + I G H+A Y L + + Y F+ Y+ +G++ + L + ++++ I++ Sbjct: 7 YKIKPRRRREGKTNYYKRYVYVI-------SKQIRFIVRITNKYVIVQIAKIDPKGDIMVASAHSSELTKKFEWKGDENNTPSAYLTGYLAALRAVK--------KGVTE------------------CVADIGLHVPSKGNKVFYAIKGAIDAGLKIPIG--------------DISIENDRIKGEHIAKYAEKLKSENLDLYNKLFSRYLGRGLNPENLPSHFEEILNKIKS 193
BLAST of CK937772 vs. ExPASy Swiss-Prot
Match: RL18_SULIL (50S ribosomal protein L18P OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rpl18p PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.780e-11 Identity = 58/234 (24.79%), Postives = 102/234 (43.59%), Query Frame = 1 Query: 106 FQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHEL-PRYGLEVGLTSYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQTHFTEYIKKGIDADGLEALYKKVHAAIRA 804 +++K +RRREGKT+Y R + + + RF+VR TNK +I QI + GD ++A+A++ EL ++ + + +AY TG L A R +K +G E + D+GL + GN+VF IP D + I G H+A Y L + + Y F+ Y+ +G++ + L + ++++ I++ Sbjct: 7 YKIKPRRRREGKTNYYKRYVYVI-------SKQIRFIVRITNKYVIVQIAKIDPKGDIMVASAHSSELTKKFEWKGDENNTPSAYLTGYLAALRAVK--------KGVTE------------------CVADIGLHVPSKGNKVFYAIKGAIDAGLKIPIG--------------DISIENDRIKGEHIAKYAEKLKSENLDLYNKLFSRYLGRGLNPENLPSHFEEILNKIKS 193
BLAST of CK937772 vs. ExPASy Swiss-Prot
Match: RL18_SULIK (50S ribosomal protein L18P OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rpl18p PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.780e-11 Identity = 58/234 (24.79%), Postives = 102/234 (43.59%), Query Frame = 1 Query: 106 FQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHEL-PRYGLEVGLTSYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQTHFTEYIKKGIDADGLEALYKKVHAAIRA 804 +++K +RRREGKT+Y R + + + RF+VR TNK +I QI + GD ++A+A++ EL ++ + + +AY TG L A R +K +G E + D+GL + GN+VF IP D + I G H+A Y L + + Y F+ Y+ +G++ + L + ++++ I++ Sbjct: 7 YKIKPRRRREGKTNYYKRYVYVI-------SKQIRFIVRITNKYVIVQIAKIDPKGDIMVASAHSSELTKKFEWKGDENNTPSAYLTGYLAALRAVK--------KGVTE------------------CVADIGLHVPSKGNKVFYAIKGAIDAGLKIPIG--------------DISIENDRIKGEHIAKYAEKLKSENLDLYNKLFSRYLGRGLNPENLPSHFEEILNKIKS 193
BLAST of CK937772 vs. ExPASy Swiss-Prot
Match: RL18_SULIA (50S ribosomal protein L18P OS=Sulfolobus islandicus (strain M.16.27) GN=rpl18p PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.780e-11 Identity = 58/234 (24.79%), Postives = 102/234 (43.59%), Query Frame = 1 Query: 106 FQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHEL-PRYGLEVGLTSYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQTHFTEYIKKGIDADGLEALYKKVHAAIRA 804 +++K +RRREGKT+Y R + + + RF+VR TNK +I QI + GD ++A+A++ EL ++ + + +AY TG L A R +K +G E + D+GL + GN+VF IP D + I G H+A Y L + + Y F+ Y+ +G++ + L + ++++ I++ Sbjct: 7 YKIKPRRRREGKTNYYKRYVYVI-------SKQIRFIVRITNKYVIVQIAKIDPKGDIMVASAHSSELTKKFEWKGDENNTPSAYLTGYLAALRAVK--------KGVTE------------------CVADIGLHVPSKGNKVFYAIKGAIDAGLKIPIG--------------DISIENDRIKGEHIAKYAEKLKSENLDLYNKLFSRYLGRGLNPENLPSHFEEILNKIKS 193 The following BLAST results are available for this feature:
BLAST of CK937772 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 96
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937772 ID=CK937772; Name=CK937772; organism=Citrus sinensis; type=EST; length=846bpback to top |