CK937761
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937761 vs. ExPASy Swiss-Prot
Match: RS4_YARLI (40S ribosomal protein S4 OS=Yarrowia lipolytica GN=RPS4 PE=2 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 5.685e-53 Identity = 110/202 (54.46%), Postives = 129/202 (63.86%), Query Frame = 3 Query: 114 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTLLGSWVRAQNHTCVHXXXXXXXXXFQI*AXXXXXXXXXXXXXXXXXXXXXDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVM 719 MARG KKHLKRL AP HWMLDKL G +AP+ S+GPHK RE LPL++ LRNRLKYAL G V A I DV+ + KT ENFRL+YD KGRF +H I DEEA +KL KV+ VQ G+KGIPY+ T+DGRTIRYPDPLIK NDT+K+DL T KIT F+KF+ GN+VM Sbjct: 1 MARGPKKHLKRLAAPSHWMLDKLSGTYAPRSSAGPHKLRESLPLVIFLRNRLKYALN--GREVNA------------------ILMQRLVKVDGKVRTDSTFPAGFMDVIQLEKTGENFRLVYDVKGRFAVHRITDEEAAYKLGKVKRVQVGKKGIPYLVTHDGRTIRYPDPLIKVNDTVKIDLATGKITSFVKFENGNIVM 182
BLAST of CK937761 vs. ExPASy Swiss-Prot
Match: RS4_CARGR (40S ribosomal protein S4 OS=Carabus granulatus GN=RpS4 PE=2 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 6.285e-52 Identity = 107/202 (52.97%), Postives = 129/202 (63.86%), Query Frame = 3 Query: 114 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTLLGSWVRAQNHTCVHXXXXXXXXXFQI*AXXXXXXXXXXXXXXXXXXXXXDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVM 719 MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RE LPL++ LRNRLKYALT +I DV++I KT E FRL+YD KGRF +H I EEAK+KLCKV+ VQ G KGIP++ T+DGRTIRYPDP+IK NDTI+L++ +KI + IKFD GN+ M Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALT--------------------NSEVTKIVMQRLIKVDGKVRTDPNYPSGFMDVITIEKTGEFFRLIYDVKGRFTIHRITAEEAKYKLCKVKRVQTGPKGIPFLVTHDGRTIRYPDPIIKVNDTIQLEIANSKIMDSIKFDSGNLCM 182
BLAST of CK937761 vs. ExPASy Swiss-Prot
Match: RS4_DICDI (40S ribosomal protein S4 OS=Dictyostelium discoideum GN=rps4 PE=1 SV=3) HSP 1 Score: 201.445 bits (511), Expect = 4.074e-51 Identity = 109/202 (53.96%), Postives = 125/202 (61.88%), Query Frame = 3 Query: 114 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTLLGSWVRAQNHTCVHXXXXXXXXXFQI*AXXXXXXXXXXXXXXXXXXXXXDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVM 719 MARG KKHLKRL AP HWMLDKL G +AP+PSSGPHK RECLPLIL+LRNRLKYALT I DV+SI KT ENFRLL+D KGRF L I EEAKFKL +V V+ G +GIPY++T DGRTIRYPDP I +DTIK+D+E+ KIT FI F+V N+ M Sbjct: 1 MARGPKKHLKRLAAPNHWMLDKLSGKWAPRPSSGPHKLRECLPLILVLRNRLKYALT--------------------KKEVTLILMQRLVKVDGKVRTDPNYPAGFMDVISIEKTKENFRLLFDPKGRFTLQRITPEEAKFKLARVTRVETGNQGIPYVHTDDGRTIRYPDPAISIHDTIKIDIESGKITAFIPFEVNNLCM 182
BLAST of CK937761 vs. ExPASy Swiss-Prot
Match: RS4_DROME (40S ribosomal protein S4 OS=Drosophila melanogaster GN=RpS4 PE=2 SV=2) HSP 1 Score: 200.675 bits (509), Expect = 6.949e-51 Identity = 105/202 (51.98%), Postives = 131/202 (64.85%), Query Frame = 3 Query: 114 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTLLGSWVRAQNHTCVHXXXXXXXXXFQI*AXXXXXXXXXXXXXXXXXXXXXDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVM 719 MARG KKHLKRL APK WMLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYAL G+ V +I DV+++ KT E FRL+YD KGRF +H I EEAK+KLCKV+ Q G KG+P++ T+DGRTIRYPDPLI AND++++D+ + KIT++IKFD GN+ M Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALN--GAEVT------------------KIVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNLCM 182
BLAST of CK937761 vs. ExPASy Swiss-Prot
Match: RS4_CANAL (40S ribosomal protein S4 OS=Candida albicans GN=RPS4 PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 8.495e-49 Identity = 105/205 (51.22%), Postives = 126/205 (61.46%), Query Frame = 3 Query: 114 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTLLGSWVRA---QNHTCVHXXXXXXXXXFQI*AXXXXXXXXXXXXXXXXXXXXXDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVM 719 M RG KKHLKRL AP HWML KL G +AP+PS+GPH RE LPL + LRNRL YAL G V+A Q H V DV+++ TNE+FRL YD KG+F +H I EEA +KL KV+ VQ G+KG+PY+ T+DGRTIRYPDPLI+ANDT+K+DL T KI FIKFD G +VM Sbjct: 1 MGRGPKKHLKRLAAPSHWMLXKLSGTYAPRPSAGPHXLRESLPLXVFLRNRLXYALC--GREVKAIMMQQHVQV---------------------VGKVRTDTTYPAGFMDVITLEATNEHFRLAYDVKGKFAVHRISAEEAVYKLGKVKKVQLGKKGVPYVVTHDGRTIRYPDPLIRANDTVKIDLATGKIXSFIKFDTGRLVM 182
BLAST of CK937761 vs. ExPASy Swiss-Prot
Match: RS4_HORSE (40S ribosomal protein S4 (Fragment) OS=Equus caballus GN=RPS4 PE=2 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 3.569e-47 Identity = 101/183 (55.19%), Postives = 118/183 (64.48%), Query Frame = 3 Query: 171 LDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTLLGSWVRAQNHTCVHXXXXXXXXXFQI*AXXXXXXXXXXXXXXXXXXXXXDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVM 719 LDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT G V+ +I DV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ M Sbjct: 1 LDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALT--GDEVK------------------KICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCM 163
BLAST of CK937761 vs. ExPASy Swiss-Prot
Match: RS4_CAEEL (40S ribosomal protein S4 OS=Caenorhabditis elegans GN=rps-4 PE=1 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.500e-45 Identity = 100/198 (50.51%), Postives = 121/198 (61.11%), Query Frame = 3 Query: 120 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTLLGSWVRAQNHTCVHXXXXXXXXXFQI*AXXXXXXXXXXXXXXXXXXXXXDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 713 RG KKHLKRL AP HWMLDKLGG FA +P+ GPHK RE LPL L LRNRLKYAL N+T +I DVV+I +TNE FR+LYDTKGR+ +H I+ EA FKLCKV+SV+ KG+P + T DGRTIRYPDP +K NDTI ++ T KIT+ +KF+ GN+ Sbjct: 2 RGPKKHLKRLAAPSHWMLDKLGGVFAVRPNPGPHKLRESLPLSLFLRNRLKYAL----------NYTEAK----------KILTQRVVRVDGKVRTCHKFPTGFMDVVAIERTNEYFRMLYDTKGRYVVHRIQAAEADFKLCKVKSVRTVNKGVPVLTTTDGRTIRYPDPHVKVNDTIVFNISTQKITDSVKFEPGNL 179
BLAST of CK937761 vs. ExPASy Swiss-Prot
Match: RS4_TETTH (40S ribosomal protein S4 OS=Tetrahymena thermophila PE=1 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.097e-39 Identity = 93/199 (46.73%), Postives = 115/199 (57.79%), Query Frame = 3 Query: 117 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTLLGSWVRAQNHTCVHXXXXXXXXXFQI*AXXXXXXXXXXXXXXXXXXXXXDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 713 ARG KKHLKR+NAPK WML+KLGG +A +PS GPHK RE LPL ++L+ RL YAL ++ T + Q DVV I KT+++FR+LYDTKGRF L S+ EEAK+KL KV + G IPYI T+D RTIR+P+P IK DT+K DL NKI F + GNV Sbjct: 1 ARGPKKHLKRINAPKSWMLNKLGGIWATRPSQGPHKLRESLPLSVLLKERLNYALN-------GRDVTLILNDKEGNVFVDQ-----------KVRRDKGYPTGLMDVVRIEKTDQSFRILYDTKGRFVLKSLSKEEAKYKLLKVTAKAIGPNQIPYIVTHDSRTIRFPNPEIKIGDTLKYDLVNNKIENFAHLESGNV 181
BLAST of CK937761 vs. ExPASy Swiss-Prot
Match: RS4_ENCCU (40S ribosomal protein S4 OS=Encephalitozoon cuniculi GN=RPS4 PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.140e-27 Identity = 75/194 (38.66%), Postives = 102/194 (52.58%), Query Frame = 3 Query: 114 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTLLG-SWVRAQNHTCVHXXXXXXXXXFQI*AXXXXXXXXXXXXXXXXXXXXXDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 692 M G + HLKR APK WMLDK GG FA P+SGPHK EC+PL ++ L+YA S + A+ + V+ DVVSI KT E+FR+LY+ +F LH I EEA ++L KV + ++ +GIPYI + G +IR+ DP I TIK+ ET+K+ E+I Sbjct: 1 MPTGHRDHLKRKTAPKSWMLDKQGGTFALMPASGPHKKTECIPLGYLISRFLRYASNFKELSIILAEKNIKVNGRVRTNSHF---------------------PVGLFDVVSIEKTGEHFRVLYNVHKKFHLHRISSEEASYRLTKV-TKKYENQGIPYIVSSCGLSIRFCDPAIDLGYTIKISNETSKVIEYI 172 The following BLAST results are available for this feature:
BLAST of CK937761 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937761 ID=CK937761; Name=CK937761; organism=Citrus sinensis; type=EST; length=739bpback to top |