CK937747
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937747 vs. ExPASy Swiss-Prot
Match: RS15A_SCHPO (40S ribosomal protein S15-A OS=Schizosaccharomyces pombe GN=rps15a PE=2 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 8.752e-48 Identity = 86/127 (67.72%), Postives = 104/127 (81.89%), Query Frame = 2 Query: 146 LPKKRTFKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPG 526 L KKR+F+ F++RGV+L+ LLD+S ++LV LF ARARRR RGL I+KLRKAK EAP EKP V+THLRNMII+PEM+GS++G+YNGK FNQVEI+PEMIGHYL EFSI+YKP KHGRPG Sbjct: 14 LRKKRSFRTFAYRGVELEQLLDLSAEQLVDLFHARARRRMLRGLGPNASRFIRKLRKAKTEAPLNEKPATVKTHLRNMIILPEMVGSVVGIYNGKLFNQVEIRPEMIGHYLGEFSITYKPTKHGRPG 140 HSP 2 Score: 29.6462 bits (65), Expect = 8.752e-48 Identity = 12/13 (92.31%), Postives = 13/13 (100.00%), Query Frame = 3 Query: 525 VGATHSSRFIPLK 563 +GATHSSRFIPLK Sbjct: 141 IGATHSSRFIPLK 153
BLAST of CK937747 vs. ExPASy Swiss-Prot
Match: RS15_CAEEL (40S ribosomal protein S15 OS=Caenorhabditis elegans GN=rps-15 PE=1 SV=3) HSP 1 Score: 180.259 bits (456), Expect = 2.527e-47 Identity = 86/127 (67.72%), Postives = 102/127 (80.31%), Query Frame = 2 Query: 146 LPKKRTFKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPG 526 L KKRTF+KF +RGVDLD LLDMS ++ KL R RRR RGLKRK +ALI K++KAK+ A EKP V+THLR+MII+PE++G +IG+YNGK FNQ EIKPEMIG YL EF+ISYKPVKHGRPG Sbjct: 12 LKKKRTFRKFMYRGVDLDQLLDMSREQFTKLLPCRMRRRLDRGLKRKHLALIAKVQKAKKAAGVLEKPATVKTHLRDMIILPELVGGVIGIYNGKVFNQTEIKPEMIGFYLGEFAISYKPVKHGRPG 138 HSP 2 Score: 29.6462 bits (65), Expect = 2.527e-47 Identity = 12/13 (92.31%), Postives = 13/13 (100.00%), Query Frame = 3 Query: 525 VGATHSSRFIPLK 563 +GATHSSRFIPLK Sbjct: 139 IGATHSSRFIPLK 151
BLAST of CK937747 vs. ExPASy Swiss-Prot
Match: RS15_YEAST (40S ribosomal protein S15 OS=Saccharomyces cerevisiae GN=RPS15 PE=1 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 3.417e-45 Identity = 85/125 (68.00%), Postives = 100/125 (80.00%), Query Frame = 2 Query: 152 KKRTFKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPG 526 KKR FK S+RGVDL+ LL+MS ++ VKL AR RRRF RG+ KP +KKLR AK AP EKP PVRTH+RNMIIVPEMIGS++G+YNGK FNQVEI+PEM+GHYL EFSI+Y PV+HGR G Sbjct: 8 KKRVFKTHSYRGVDLEKLLEMSTEDFVKLAPARVRRRFARGMTSKPAGFMKKLRAAKLAAPENEKPAPVRTHMRNMIIVPEMIGSVVGIYNGKAFNQVEIRPEMLGHYLGEFSITYTPVRHGRAG 132
BLAST of CK937747 vs. ExPASy Swiss-Prot
Match: RS156_ARATH (40S ribosomal protein S15-6 OS=Arabidopsis thaliana GN=RPS15F PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 7.612e-45 Identity = 90/129 (69.77%), Postives = 107/129 (82.95%), Query Frame = 2 Query: 152 KKRTFKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEK--PEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGWC 532 KKRTFKKFSFRG ++DALL MSN +L KLF+AR RRRF RGLK++P+ LIKKLR+AK+EA K PE V+THLRNMIIVPEMIGS++GV+NGK FN++ IKPEMIGHYLAEFS++ K V H RP C Sbjct: 17 KKRTFKKFSFRGFNVDALLKMSNVDLAKLFNARVRRRFYRGLKKQPLILIKKLRRAKKEASDENKMKPEVVKTHLRNMIIVPEMIGSVVGVHNGKKFNEIVIKPEMIGHYLAEFSMTCKKVNHHRPRIC 145
BLAST of CK937747 vs. ExPASy Swiss-Prot
Match: RS15_DICDI (40S ribosomal protein S15 OS=Dictyostelium discoideum GN=rps15 PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 9.843e-40 Identity = 74/126 (58.73%), Postives = 94/126 (74.60%), Query Frame = 2 Query: 152 KKRTFKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPP-GEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPG 526 KKRTFKKF++ GV L++LLD+ ++L+ L RARR+ +R K + +KK R +K GEKP V+TH RN++IVPEMIGS+IG+YNGK FNQVE+KPEMIGHY EFS+SYK V HGRPG Sbjct: 6 KKRTFKKFTYSGVALESLLDLKEEQLISLLRCRARRKLRRETPIKHVNFLKKCRASKAAVTQVGEKPALVKTHARNILIVPEMIGSVIGIYNGKVFNQVEVKPEMIGHYTGEFSLSYKSVNHGRPG 131 HSP 2 Score: 29.6462 bits (65), Expect = 9.843e-40 Identity = 12/13 (92.31%), Postives = 13/13 (100.00%), Query Frame = 3 Query: 525 VGATHSSRFIPLK 563 +GATHSSRFIPLK Sbjct: 132 IGATHSSRFIPLK 144
BLAST of CK937747 vs. ExPASy Swiss-Prot
Match: RS15_NAEGR (40S ribosomal protein S15 (Fragment) OS=Naegleria gruberi GN=RPS15 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 3.004e-28 Identity = 57/104 (54.81%), Postives = 78/104 (75.00%), Query Frame = 2 Query: 212 MSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRP 523 M NDEL LF++ RR +G+ +K LI+K +K + AP GEKP+ V+THLR+MII+P MIG +IGVY GK + VEIKPEM+G L++FS++Y+PVKHG+P Sbjct: 3 MENDELKNLFTSALRRIIGKGISKKYKTLIEKAQKKRDTAPYGEKPDAVKTHLRDMIILPSMIGCVIGVYQGKDYVSVEIKPEMVGMKLSDFSLTYRPVKHGKP 106 HSP 2 Score: 23.0978 bits (48), Expect = 3.004e-28 Identity = 9/13 (69.23%), Postives = 11/13 (84.62%), Query Frame = 3 Query: 525 VGATHSSRFIPLK 563 +GAT SS F+PLK Sbjct: 108 IGATSSSGFVPLK 120
BLAST of CK937747 vs. ExPASy Swiss-Prot
Match: RS19_THEGJ (30S ribosomal protein S19P OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rps19p PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.957e-28 Identity = 62/120 (51.67%), Postives = 85/120 (70.83%), Query Frame = 2 Query: 167 KKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPG 526 K+F +RG LD LL+MS +E KL AR RR +RGL + L++K+R AK+ G+ +P+RTH R+MI++PEM+G I V+NGK F +EIKPEMIGHYL EF+++ K V+HG PG Sbjct: 5 KEFRYRGYTLDELLNMSLEEFAKLLPARQRRSLKRGLSPEQKKLLRKIRLAKK----GKYNKPIRTHSRDMIVLPEMVGITIHVHNGKEFVPIEIKPEMIGHYLGEFALTRKIVQHGSPG 120
BLAST of CK937747 vs. ExPASy Swiss-Prot
Match: RS19_PYRFU (30S ribosomal protein S19P OS=Pyrococcus furiosus GN=rps19p PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.957e-28 Identity = 63/120 (52.50%), Postives = 86/120 (71.67%), Query Frame = 2 Query: 167 KKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPG 526 K+F +RG L+ L++MS +EL +LF AR RR +RGL + L++K+R AK+ G+ +P+RTH R+MII+PEM+G I V+NGK F VEIKPEMIGHYL EF+ + K V+HG PG Sbjct: 4 KEFRYRGYTLEQLMNMSLEELARLFPARQRRSLKRGLTPEQKKLLRKIRLAKK----GKYKKPIRTHCRDMIILPEMVGLTIYVHNGKEFVPVEIKPEMIGHYLGEFAPTRKKVEHGAPG 119
BLAST of CK937747 vs. ExPASy Swiss-Prot
Match: RS19_METKA (30S ribosomal protein S19P OS=Methanopyrus kandleri GN=rps19p PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.440e-27 Identity = 58/124 (46.77%), Postives = 85/124 (68.55%), Query Frame = 2 Query: 155 KRTFKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPG 526 ++ + +F +RG L L+ M +E ++L AR RR +RGL + L++K+R+A+R G+KP +RTH R+MII+PEM+G I VYNGK F +V+I+PEMIGHYL EF+ + K V+HG G Sbjct: 15 EKEWVEFRYRGYTLGELMKMPIEEFIELLPARQRRSLKRGLPSRHKKLLRKVRRARRLLRRGKKPPVIRTHCRDMIILPEMVGLTIAVYNGKEFKEVKIEPEMIGHYLGEFAKTRKTVEHGGIG 138 HSP 2 Score: 23.483 bits (49), Expect = 1.440e-27 Identity = 9/13 (69.23%), Postives = 11/13 (84.62%), Query Frame = 3 Query: 525 VGATHSSRFIPLK 563 +GAT SS F+PLK Sbjct: 137 IGATRSSLFVPLK 149
BLAST of CK937747 vs. ExPASy Swiss-Prot
Match: RS19_PYRKO (30S ribosomal protein S19P OS=Pyrococcus kodakaraensis GN=rps19p PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.442e-27 Identity = 62/120 (51.67%), Postives = 84/120 (70.00%), Query Frame = 2 Query: 167 KKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPG 526 K+F +RG LD LL+MS +E KL +R RR +RGL + L++K+R AK+ G+ +P+RTH R+MI++PEM+G I VYNGK F VEIK EMIGHYL EF+++ K V+HG PG Sbjct: 5 KEFRYRGYTLDELLNMSLEEFAKLLPSRQRRSLKRGLSPEQKKLLRKIRLAKK----GKYNKPIRTHSRDMIVLPEMVGMTIHVYNGKEFVPVEIKEEMIGHYLGEFAMTRKVVQHGSPG 120 The following BLAST results are available for this feature:
BLAST of CK937747 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937747 ID=CK937747; Name=CK937747; organism=Citrus sinensis; type=EST; length=745bpback to top |