CK937739

Overview
NameCK937739
Unique NameCK937739
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length789
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937739 vs. ExPASy Swiss-Prot
Match: TPIS_EMENI (Triosephosphate isomerase OS=Emericella nidulans GN=tpiA PE=3 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 2.105e-64
Identity = 131/249 (52.61%), Postives = 159/249 (63.86%), Query Frame = 3
Query:   39 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWAKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 779
            M RKFFVGGN+K NG  E    I+  LN                  L+L   +     +  VAAQN + K  GAFTGEIS + L    I W ILGHSERR+IL E++EF+  K   A+  GL+VI C+GETLE+REA  T+DVV  Q  A A  +S   W+ +V+AYEPVWAIGTGKVAT  QAQEVH  +RKWL    S E A  TRIIYGGSV+  NCK+LA + D+DGFLVGGASLKP F+DI+ +
Sbjct:    1 MPRKFFVGGNFKMNGNAESTTSIIKNLNSANLDKSVEVVVSPPA--LYLLQAREVANKEIGVAAQNVFDKPNGAFTGEISVQQLREANIDWTILGHSERRVILKETDEFIARKTKAAIEGGLQVIFCIGETLEEREANKTIDVVTRQLNAAAKELSKEQWAKVVIAYEPVWAIGTGKVATTEQAQEVHSAIRKWLKDAISAEAAENTRIIYGGSVSEKNCKDLAKEADIDGFLVGGASLKPAFVDIVNA 247          
BLAST of CK937739 vs. ExPASy Swiss-Prot
Match: TPIS_COPC7 (Triosephosphate isomerase OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=TPI PE=3 SV=2)

HSP 1 Score: 245.358 bits (625), Expect = 2.749e-64
Identity = 131/250 (52.40%), Postives = 166/250 (66.40%), Query Frame = 3
Query:   39 MGRKFFVGGNWKCNGTP-EEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWAKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 779
            M R FFVGGNWK N T     K +V  LN+                 L+L  ++        VAAQN + K+ GAFTGEIS + + + GIP+VILGHSERR + +E++E V  K   AL  GLKVI C+GETL++RE G T  V   Q  A+  ++    WSNIV+AYEPVWAIGTGKVAT +QAQE H ++RK+L    SP++A+ TR+IYGGSVN AN K+LA+Q D+DGFLVGGASLKPEF+DII +
Sbjct:    1 MTRSFFVGGNWKLNPTSLSAAKALVEALNKADLDPSTEVVVAPPA--LYLLPIQEIAGKAVKVAAQNAYFKESGAFTGEISPKQISDAGIPYVILGHSERRTLFHETSEVVALKTRAALDNGLKVILCIGETLKEREEGRTAAVCEEQLSAVVKQLKEEDWSNIVIAYEPVWAIGTGKVATTSQAQETHVDVRKYLATAVSPKVASETRVIYGGSVNAANSKDLASQQDIDGFLVGGASLKPEFVDIINA 248          
BLAST of CK937739 vs. ExPASy Swiss-Prot
Match: TPIS_YEAST (Triosephosphate isomerase OS=Saccharomyces cerevisiae GN=TPI1 PE=1 SV=2)

HSP 1 Score: 243.047 bits (619), Expect = 1.364e-63
Identity = 122/249 (49.00%), Postives = 162/249 (65.06%), Query Frame = 3
Query:   39 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFL--FLGLVKSSLRPDFHVAAQNCWAKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 779
            M R FFVGGN+K NG+ + +K+IV  LN                 +L   + LVK   +P   V AQN + K  GAFTGE S + + ++G  WVILGHSERR   +E ++F+ DK  +AL QG+ VI C+GETLE+++AG T+DVV  Q  A+ + V  W+N+V+AYEPVWAIGTG  ATP  AQ++H  +RK+L +    + A+  RI+YGGS NG+N      + DVDGFLVGGASLKPEF+DII S
Sbjct:    1 MARTFFVGGNFKLNGSKQSIKEIVERLNTASIPENVEVVICPPATYLDYSVSLVK---KPQVTVGAQNAYLKASGAFTGENSVDQIKDVGAKWVILGHSERRSYFHEDDKFIADKTKFALGQGVGVILCIGETLEEKKAGKTLDVVERQLNAVLEEVKDWTNVVVAYEPVWAIGTGLAATPEDAQDIHASIRKFLASKLGDKAASELRILYGGSANGSNAVTFKDKADVDGFLVGGASLKPEFVDIINS 246          
BLAST of CK937739 vs. ExPASy Swiss-Prot
Match: TPIS_YARLI (Triosephosphate isomerase OS=Yarrowia lipolytica GN=TPI1 PE=3 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.573e-62
Identity = 127/248 (51.21%), Postives = 160/248 (64.52%), Query Frame = 3
Query:   39 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLR-PDFHVAAQNCWAKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 779
            M R FFVGGN+K NG+ E +K IV  LN  +              F +L L K SL+ P   VA QN + K  GAFTGE+S   L ++G  WVILGHSERR I  ES+E++ DK  YAL  GL VI C+GET+++++AG T+DVV +Q   +  ++  WSN+V+AYEPVWAIGTG  AT   AQ++H E+R +L      + A   RIIYGGSVNG N      + DVDGFLVGGASLKPEF+DII S
Sbjct:    1 MSRTFFVGGNFKMNGSLESIKAIVERLNASELDPKTEVVISPP--FPYLLLAKESLKKPTVSVAGQNSFDKGDGAFTGEVSVAQLKDVGAKWVILGHSERRTINKESSEWIADKTKYALDNGLDVILCIGETIDEKKAGKTLDVVRSQLDPVIAKIKDWSNVVIAYEPVWAIGTGLAATAEDAQQIHHEIRAYLKDKIGAQ-ADKVRIIYGGSVNGKNSGTFKDKSDVDGFLVGGASLKPEFVDIINS 245          
BLAST of CK937739 vs. ExPASy Swiss-Prot
Match: TPIS_ENTHI (Triosephosphate isomerase OS=Entamoeba histolytica GN=TPI PE=1 SV=2)

HSP 1 Score: 238.81 bits (608), Expect = 2.573e-62
Identity = 134/253 (52.96%), Postives = 165/253 (65.22%), Query Frame = 3
Query:   48 KFFVGGNWKCNGTPEEVKKIVS-VLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFH-----VAAQNCWAKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPEFIDIIKS 779
            KF VGGNWKCNGT   ++ +   V                   F+++  V+  L  + +     V+A+N W K G A+TGE+   MLV+  +P+VILGHSERR I +ESNE V +KV  A+  GLKVIAC+GET  QR A  T +VVAAQ KAI + +S  +W NI+LAYEPVWAIGTGK ATP QAQEVH  +RKW+  N S E+A ATRI YGGSVN ANC ELA + D+DGFLVGGASL   +F  II S
Sbjct:    5 KFVVGGNWKCNGTLASIETLTKGVAASVDAELAKKVEVIVGVPFIYIPKVQQILAGEANGANILVSAENAWTKSG-AYTGEVHVGMLVDCQVPYVILGHSERRQIFHESNEQVAEKVKVAIDAGLKVIACIGETEAQRIANQTEEVVAAQLKAINNAISKEAWKNIILAYEPVWAIGTGKTATPDQAQEVHQYIRKWMTENISKEVAEATRIQYGGSVNPANCNELAKKADIDGFLVGGASLDAAKFKTIINS 256          
BLAST of CK937739 vs. ExPASy Swiss-Prot
Match: TPIS_KLUMA (Triosephosphate isomerase OS=Kluyveromyces marxianus GN=TPI1 PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 3.361e-62
Identity = 120/247 (48.58%), Postives = 157/247 (63.56%), Query Frame = 3
Query:   39 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWAKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 779
            M R FF+GGN+K NGT   +K+IV  LN                 +L    V  + +    VAAQN + K  GAFTGE S E + ++G  WVILGHSERR   +E++EF+ DK  +AL  G+KVI C+GETLE+++ G T++VV  Q +A+ D+V  W+N+V+AYEPVWAIGTG  AT   AQ +H  +R++L    S + A   RI+YGGS NG N      + DVDGFLVGGASLKPEF+DII S
Sbjct:    1 MARTFFIGGNFKMNGTKASIKEIVERLNSASIPSNVEVVIAPPAAYLDHA-VSLNKKAQVSVAAQNAYLKASGAFTGENSVEQIKDVGAEWVILGHSERRTYFHETDEFIADKTKFALDSGVKVILCIGETLEEKQKGITLEVVQRQLQAVLDKVQDWTNVVVAYEPVWAIGTGLAATSDDAQAIHHSIREFLAKKLSKDTAEKIRILYGGSANGKNAVTFKDKADVDGFLVGGASLKPEFVDIINS 246          
BLAST of CK937739 vs. ExPASy Swiss-Prot
Match: TPIS_TRYBB (Triosephosphate isomerase, glycosomal OS=Trypanosoma brucei brucei PE=1 SV=2)

HSP 1 Score: 238.039 bits (606), Expect = 4.389e-62
Identity = 121/243 (49.79%), Postives = 161/243 (66.26%), Query Frame = 3
Query:   66 NWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSL-RPDFHVAAQNCWAKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSAE 785
            NWKCNG+ + + +++ + N                 F+ L + K  L  P F +AAQN  AK G AFTGE+S  +L + G+ W++LGHSERR    E+NE V DKVA A++ G  VIAC+GETL++RE+G T  VV  Q  AIA ++  + W+ +V+AYEPVWAIGTGKVATP QAQE H  +R W+ +    ++A   RI+YGGSVNG N + L  Q DV+GFLVGGASLKPEF+DIIK+ +
Sbjct:   11 NWKCNGSQQSLSELIDLFNSTSINHDVQCVVAST--FVHLAMTKERLSHPKFVIAAQNAIAKSG-AFTGEVSLPILKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACIGETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQEAHALIRSWVSSKIGADVAGELRILYGGSVNGKNARTLYQQRDVNGFLVGGASLKPEFVDIIKATQ 250          
BLAST of CK937739 vs. ExPASy Swiss-Prot
Match: TPIS_ASHGO (Triosephosphate isomerase OS=Ashbya gossypii GN=TPI1 PE=3 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 5.732e-62
Identity = 119/247 (48.18%), Postives = 159/247 (64.37%), Query Frame = 3
Query:   39 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWAKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 779
            M R FFVGGN+K NG+ + +K+IV  LN                 +L   +   S  P   V AQN + K  GA+TGE S + + ++G  WVILGHSERR   NE +E V +K A+AL +G+ VI C+GETL++++AG T+DVV  Q   + ++V  W+N+V+AYEPVWAIGTG  AT   AQ++H  +R +L   TS ++A A RI++GGS NGAN      + DVDGFLVGGASLKPEF+DII S
Sbjct:    1 MARTFFVGGNFKLNGSKQSIKEIVERLNTADLADNVEVVICPPATYLDHAVSLVS-HPQVTVGAQNAYTKASGAYTGENSVDQIKDVGAKWVILGHSERRTYFNEDDEQVAEKTAFALERGVSVILCIGETLDEKKAGVTLDVVKRQLTPVLEKVKDWTNVVIAYEPVWAIGTGLAATAEDAQDIHAAIRDFLAERTSRDVADAVRILFGGSANGANAASFRDKADVDGFLVGGASLKPEFVDIINS 246          
BLAST of CK937739 vs. ExPASy Swiss-Prot
Match: TPIS_KLULA (Triosephosphate isomerase OS=Kluyveromyces lactis GN=TPI1 PE=3 SV=2)

HSP 1 Score: 233.032 bits (593), Expect = 1.412e-60
Identity = 114/247 (46.15%), Postives = 159/247 (64.37%), Query Frame = 3
Query:   39 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWAKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 779
            M R FF+GGN+K NG+   +K+IV  LN                 +L   +  +  R +  ++AQN ++K  GA+TGE S E + ++G  WVILGHSERR   NE++E V +K  +AL  G+KVI C+GETLE+++   T+ VV  Q +A+ ++V  W+N+V+AYEPVWAIGTG  AT   AQ++H  +R++L    S ++A + RI+YGGS NG N      + DVDGFLVGGASLKPEF+DII S
Sbjct:    1 MARTFFIGGNFKMNGSKASIKEIVDRLNGASIPSNVEVVIAPPAIYLDHAVALNK-RKEVKISAQNAYSKASGAYTGENSVEQIKDVGAEWVILGHSERRTYFNETDEIVAEKTKFALDSGVKVILCIGETLEEKQQNITLQVVQRQLQAVLEKVQDWTNVVVAYEPVWAIGTGLAATAEDAQDIHHSIREFLAEKLSRDVADSVRILYGGSANGKNAVTFKDKADVDGFLVGGASLKPEFVDIINS 246          
BLAST of CK937739 vs. ExPASy Swiss-Prot
Match: TPIS_AEDTO (Triosephosphate isomerase (Fragment) OS=Aedes togoi GN=Tpi PE=3 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.408e-60
Identity = 115/179 (64.25%), Postives = 136/179 (75.98%), Query Frame = 3
Query:  180 FLGLVKSSLRPDFHVAAQNCWAKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPD 716
            +L L +S L     VAAQNC+    GAFTGEIS  ML +L I WVILGHSERR I  ES+E + DKVA+AL++GLKVIAC+GETL++REAG T  V   QTKAIAD+V  WSN+V+AYEPVWAIGTGK ATP QAQEVH  LRKW   N S +++A+ RI YGGSV  ANC+ELAA+PD
Sbjct:   28 YLTLARSQLPDSVGVAAQNCYKVAKGAFTGEISPAMLKDLNIGWVILGHSERRAIFGESDELIADKVAHALAEGLKVIACIGETLQEREAGQTEAVCFRQTKAIADKVKDWSNVVVAYEPVWAIGTGKTATPEQAQEVHVALRKWFTDNVSADVSASIRIQYGGSVTAANCRELAAKPD 206          
The following BLAST results are available for this feature:
BLAST of CK937739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_EMENI2.105e-6452.61Triosephosphate isomerase OS=Emericella nidulans G... [more]
TPIS_COPC72.749e-6452.40Triosephosphate isomerase OS=Coprinopsis cinerea (... [more]
TPIS_YEAST1.364e-6349.00Triosephosphate isomerase OS=Saccharomyces cerevis... [more]
TPIS_YARLI2.573e-6251.21Triosephosphate isomerase OS=Yarrowia lipolytica G... [more]
TPIS_ENTHI2.573e-6252.96Triosephosphate isomerase OS=Entamoeba histolytica... [more]
TPIS_KLUMA3.361e-6248.58Triosephosphate isomerase OS=Kluyveromyces marxian... [more]
TPIS_TRYBB4.389e-6249.79Triosephosphate isomerase, glycosomal OS=Trypanoso... [more]
TPIS_ASHGO5.732e-6248.18Triosephosphate isomerase OS=Ashbya gossypii GN=TP... [more]
TPIS_KLULA1.412e-6046.15Triosephosphate isomerase OS=Kluyveromyces lactis ... [more]
TPIS_AEDTO2.408e-6064.25Triosephosphate isomerase (Fragment) OS=Aedes togo... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004482_E04 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0001_IVF_E04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937739 ID=CK937739; Name=CK937739; organism=Citrus sinensis; type=EST; length=789bp
GGGGATAACACACACACCGACACACGCACTCGTCGAACATGGGCAGGAAG
TTCTTCGTCGGCGGTAACTGGAAATGCAATGGAACACCTGAAGAAGTGAA
AAAGATAGTGAGCGTACTCAATGAAGGTCAAGTTCCATCTTCTGATGTCG
TTGAGGTCGTTGTTAGCCCTCCGTTTCTGTTTCTTGGACTGGTGAAGAGT
TCGTTGAGGCCTGATTTTCATGTTGCGGCACAGAATTGCTGGGCCAAGAA
GGGAGGTGCTTTCACCGGTGAGATTAGTGCGGAAATGCTCGTCAATTTGG
GTATTCCTTGGGTCATTCTTGGTCATTCTGAAAGGAGACTCATTTTGAAT
GAATCAAATGAGTTTGTTGGGGATAAGGTTGCATATGCACTTTCTCAAGG
TTTGAAGGTGATTGCTTGTGTTGGTGAGACACTTGAGCAGCGTGAAGCAG
GATCTACTATGGATGTTGTTGCTGCACAAACTAAAGCAATCGCAGATCGA
GTCTCAAGCTGGTCAAACATTGTTTTGGCCTATGAACCTGTGTGGGCTAT
TGGAACTGGGAAGGTTGCCACTCCAGCGCAGGCTCAAGAAGTACATTTTG
AACTGAGGAAATGGCTTTTTGCAAACACCAGTCCTGAAATTGCTGCAGCA
ACACGGATCATCTACGGAGGATCCGTAAATGGTGCAAACTGCAAGGAATT
GGCTGCACAGCCTGATGTTGACGGATTTTTGGTTGGTGGTGCTTCGTTGA
AGCCGGAGTTCATTGACATCATCAAATCTGCTGAGCTGA
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