CK937738
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937738 vs. ExPASy Swiss-Prot
Match: MDHC_HUMAN (Malate dehydrogenase, cytoplasmic OS=Homo sapiens GN=MDH1 PE=1 SV=4) HSP 1 Score: 247.669 bits (631), Expect = 4.919e-65 Identity = 123/216 (56.94%), Postives = 156/216 (72.22%), Query Frame = 3 Query: 87 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAW 734 EP+RVLVTGAAGQI Y+L+ I G + G DQP+IL +LDI P L+GV MEL D A PL+K V+AT A +++A++VG PR+EGMERKD++ NV I+K+Q +AL+++A + KV+VV NPANTN L + APSIP +N +CLTRLDHNRA QI+ KL V +DVKNVIIWGNHSS+QYPDVNHA V E V E +KDD+W Sbjct: 3 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEDVAFKDLDVAILVGSMPRREGMERKDLLKANVKIFKSQGAALDKYAKKSVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTANDVKNVIIWGNHSSTQYPDVNHAKVKLQGKEVGVYEALKDDSW 218
BLAST of CK937738 vs. ExPASy Swiss-Prot
Match: MDHC_MOUSE (Malate dehydrogenase, cytoplasmic OS=Mus musculus GN=Mdh1 PE=1 SV=3) HSP 1 Score: 247.284 bits (630), Expect = 6.425e-65 Identity = 124/216 (57.41%), Postives = 155/216 (71.76%), Query Frame = 3 Query: 87 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAW 734 EP+RVLVTGAAGQI Y+L+ I G + G DQP+IL +LDI P L+GV MEL D A PL++ V+AT A +++AV+VG PR+EGMERKD++ NV I+K+Q +ALE++A + KV+VV NPANTN L + APSIP +N +CLTRLDHNRA QI+ KL V DVKNVIIWGNHSS+QYPDVNHA V E V E +KDD+W Sbjct: 3 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLQDVIATDKEEIAFKDLDVAVLVGSMPRREGMERKDLLKANVKIFKSQGTALEKYAKKSVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKSQIALKLGVTADDVKNVIIWGNHSSTQYPDVNHAKVKLQGKEVGVYEALKDDSW 218
BLAST of CK937738 vs. ExPASy Swiss-Prot
Match: MDHC_BOVIN (Malate dehydrogenase, cytoplasmic OS=Bos taurus GN=MDH1 PE=2 SV=3) HSP 1 Score: 244.973 bits (624), Expect = 3.189e-64 Identity = 122/216 (56.48%), Postives = 154/216 (71.30%), Query Frame = 3 Query: 87 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAW 734 EP+RVLVTGAAGQI Y+L+ I G + G DQP+IL +LDI P L+GV MEL D A PL+K V+AT A +++A++VG PR++GMERKD++ NV I+K Q +AL+++A + KV+VV NPANTN L + APSIP +N +CLTRLDHNRA QI+ KL V DVKNVIIWGNHSS+QYPDVNHA V E V E +KDD+W Sbjct: 3 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTSDDVKNVIIWGNHSSTQYPDVNHAKVKLQGKEVGVYEALKDDSW 218
BLAST of CK937738 vs. ExPASy Swiss-Prot
Match: MDHC_XENTR (Malate dehydrogenase, cytoplasmic OS=Xenopus tropicalis GN=mdh1 PE=2 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 5.439e-64 Identity = 123/216 (56.94%), Postives = 156/216 (72.22%), Query Frame = 3 Query: 87 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAW 734 EPV+VLVTGAAGQI Y+L+ IA+G + G DQP+IL +LDI P L GV MEL D A PL+K V+AT A +++A++VG PR+EGMERKD++ NV I+K+Q +AL +++ + KV+VV NPANTN L + APSIP +N +CLTRLDHNRA GQI+ KLNV DVKNVIIWGNHSS+QYPD +HATVN + E VK+D W Sbjct: 3 EPVKVLVTGAAGQIAYSLLYGIAKGDVFGKDQPLILVLLDITPMMTVLEGVVMELQDCALPLLKEVIATDKEDVAFKDLDVAILVGSMPRREGMERKDLLKANVKIFKSQGAALNKYSKKSVKVIVVGNPANTNCLTAMKSAPSIPKENFSCLTRLDHNRAKGQIALKLNVASDDVKNVIIWGNHSSTQYPDASHATVNLQGKDVGAFEAVKNDDW 218
BLAST of CK937738 vs. ExPASy Swiss-Prot
Match: MDHC_ECHGR (Malate dehydrogenase, cytoplasmic OS=Echinococcus granulosus GN=MDH PE=2 SV=2) HSP 1 Score: 241.891 bits (616), Expect = 2.699e-63 Identity = 116/215 (53.95%), Postives = 154/215 (71.63%), Query Frame = 3 Query: 90 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAW 734 P+RVL+TGAAGQI Y L M+A G + G DQ +ILH+LDIP A L+GV MEL D AF ++ G+V T EA T +++A+MVG PRK+GMER+D++S NV I+K Q AL+++A KVLVV NPANTN LI+ ++APSIP +N T LTRLDHNRA+ Q++ K V + VKNV IWGNHS+ Q+PD++HA V + P +EL+ D+ W Sbjct: 4 PLRVLITGAAGQIAYNLSNMVANGNLFGKDQQIILHLLDIPEAKTVLDGVVMELQDCAFTVLAGIVPTHCLKEAFTDIDVALMVGAMPRKQGMERRDLLSSNVKIFKEQGEALDKYAKKTVKVLVVGNPANTNCLIMSKYAPSIPKENFTALTRLDHNRAIYQVAAKAGVPNTCVKNVCIWGNHSNKQFPDLSHAVVTKDGKQHPAKELINDEKW 218
BLAST of CK937738 vs. ExPASy Swiss-Prot
Match: MDHC_FELCA (Malate dehydrogenase, cytoplasmic OS=Felis catus GN=MDH1 PE=2 SV=3) HSP 1 Score: 241.506 bits (615), Expect = 3.525e-63 Identity = 121/216 (56.02%), Postives = 154/216 (71.30%), Query Frame = 3 Query: 87 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAW 734 EP+RVLVTGAAGQI Y+L+ I G + G DQP+IL +LDI P L+GV MEL D A PL+K V+AT A +++A++VG PR++GMERKD++ NV I+K Q +ALE++A + KV+VV NPANTN L + APSIP +N +CLTRLDHNRA QI+ KL V DVKNVIIWGNHSS+QYPDV+HA V E V + +KDD+W Sbjct: 3 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEDVAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALEKYAKKSVKVIVVGNPANTNCLTACKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTSDDVKNVIIWGNHSSTQYPDVSHAKVKLHGKEVGVYDALKDDSW 218
BLAST of CK937738 vs. ExPASy Swiss-Prot
Match: MDHC_DICDI (Probable malate dehydrogenase 3 OS=Dictyostelium discoideum GN=mdhC PE=3 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.750e-62 Identity = 116/219 (52.97%), Postives = 149/219 (68.04%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAW 734 M+ E + VL+TGAAGQI Y+L+ + +G M G DQ + LH+LDIP ++L G+ ME+ D A+PLI V T D EA TGV+ A++VG PR+EGMER D++ N +I+K Q AL +HA N KVLVV NPANTNALI + A IP +N TCLTRLD NRA QI+ K V V DV NVIIWGNHSS+QYPD +N + G+ P+ +KD+ W Sbjct: 1 MSNEVINVLITGAAGQIAYSLIFNVCKGDMFGLDQRIKLHLLDIPQMVDSLKGIVMEIQDGAYPLIADTVITADVKEAFTGVHYAILVGAMPRREGMERADLLKANAAIFKVQGKALAEHANKNVKVLVVGNPANTNALIAQVSANGIPKENFTCLTRLDQNRAKSQIALKAGVNVKDVHNVIIWGNHSSTQYPDYRCGYINLSTGKTPISTAIKDEKW 219
BLAST of CK937738 vs. ExPASy Swiss-Prot
Match: MDHC_XENLA (Malate dehydrogenase, cytoplasmic OS=Xenopus laevis GN=mdh1 PE=2 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 6.649e-62 Identity = 120/216 (55.56%), Postives = 154/216 (71.30%), Query Frame = 3 Query: 87 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAW 734 EPV+VLVTGAAGQI Y+L+ IA+G + G DQP+IL +LDI P L GV MEL D A PL+K V+AT A +++A++VG PR+EGMERKD++ NV I+K+Q +AL +++ + KV+VV NPANTN L + APSIP +N +CLTRLDHNRA QI+ KLNV DVKNVIIWGNHSS+QYPD +HA+V + E VK+D W Sbjct: 3 EPVKVLVTGAAGQIAYSLLFGIAKGDVFGKDQPLILVLLDITPMMTVLEGVVMELQDCALPLLKEVIATDKEDVAFKDLDVAILVGSMPRREGMERKDLLKANVKIFKSQGAALNKYSKKSVKVIVVGNPANTNCLTALKSAPSIPKENFSCLTRLDHNRAKAQIALKLNVASDDVKNVIIWGNHSSTQYPDASHASVTLQGKDVGAFEAVKNDDW 218
BLAST of CK937738 vs. ExPASy Swiss-Prot
Match: MDHA_DICDI (Probable malate dehydrogenase 1 OS=Dictyostelium discoideum GN=mdhA PE=3 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 1.061e-59 Identity = 118/218 (54.13%), Postives = 147/218 (67.43%), Query Frame = 3 Query: 90 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGE---KPVRELVKDDAW 734 P++VLVTGAAGQI Y+L+ MIA G M G QPVILH+LDIP A+AL GV MEL D ++PL++ VVATTD A +N+A++VG FPR GM+RKD++ NVSI+K Q AL ++A+ KVLVV NPANTNAL A +P N + LTRLD NRA ISEK+ V +V NVIIWGNHS +Q PDVNH + +P+ V DD W Sbjct: 61 PIKVLVTGAAGQIAYSLMFMIASGQMFGPHQPVILHLLDIPKMADALKGVVMELQDCSYPLLQSVVATTDIQTAFLHINVAILVGAFPRGPGMQRKDLLKVNVSIFKEQGEALNKYASRGVKVLVVGNPANTNALTALMKASDLPTSNFSALTRLDQNRAQSMISEKVGTNVDNVHNVIIWGNHSQTQVPDVNHGYILNYPNRGLIEPIPSSVNDDKW 278
BLAST of CK937738 vs. ExPASy Swiss-Prot
Match: MDH_THEFY (Malate dehydrogenase OS=Thermobifida fusca (strain YX) GN=mdh PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.811e-59 Identity = 121/219 (55.25%), Postives = 150/219 (68.49%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAW 734 MAK PV V VTGAAGQIGYAL+ IA G +LG D PV L +L+IP A +A G MEL D AFPL+ GV D +A GVN+A++VG PR +GMER+D++ N I+ Q +A+ AA + +VLVV NPANTNALI + AP IPA T +TRLDHNRAL Q++ KLNV VSD+K + IWGNHS++QYPD+ HA VN G V E V D+ W Sbjct: 1 MAKAPVNVTVTGAAGQIGYALLFRIASGQLLGVDTPVRLRLLEIPQAIKAAEGTAMELDDCAFPLLAGVDIYDDPRKAFDGVNVALLVGARPRTKGMERRDLLEANGGIFGPQGAAINDGAADDVRVLVVGNPANTNALIAQAHAPDIPADRFTAMTRLDHNRALSQLAAKLNVSVSDIKKLTIWGNHSATQYPDIFHAEVN---GRSAV-EAVNDEEW 215 The following BLAST results are available for this feature:
BLAST of CK937738 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 213
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937738 ID=CK937738; Name=CK937738; organism=Citrus sinensis; type=EST; length=735bpback to top |