CK937738
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937738 vs. ExPASy Swiss-Prot
Match: MDH_XANOP (Malate dehydrogenase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=mdh PE=3 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 4.776e-52 Identity = 109/219 (49.77%), Postives = 143/219 (65.30%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAW 734 K PVRV VTGAAGQIGYAL+ IA G MLG DQPVIL +L++ A AL GV MEL D AFPL+ G+V T DA A +++A++VG PR GMERKD++ +N I+ AQ +AL + A + KVLVV NPANTNA I + AP + N T + RLDHNRAL Q++ KL V ++ +++WGNHS + YPD AT + A+ + + + D W Sbjct: 2 KAPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLELSNEKAQAALKGVMMELEDCAFPLLAGMVGTDDAEVAFKDIDVALLVGARPRGPGMERKDLLLENAKIFTAQGAALNKVAKRDVKVLVVGNPANTNAYIAMKSAPDLNPNNFTAMLRLDHNRALSQLALKLGKPVGGIEKLVVWGNHSPTMYPDYRFATSDGAS----IGDAINDQEW 216
BLAST of CK937738 vs. ExPASy Swiss-Prot
Match: MDH_XYLFA (Malate dehydrogenase OS=Xylella fastidiosa GN=mdh PE=3 SV=2) HSP 1 Score: 204.142 bits (518), Expect = 6.237e-52 Identity = 110/219 (50.23%), Postives = 144/219 (65.75%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAW 734 K VRV VTGAAGQIGY+L+ IA G M G D+PVIL ML++P A AL GV MEL D AFPL+ G+V T + A ++A++VG PR GMERKD++ +N I+ AQ +AL + A + KVLVV NPANTNA I + AP + K+ T + RLDHNRAL Q+S KL+ V++++ +I+WGNHS + YPD AT A P+ E + D AW Sbjct: 2 KSLVRVAVTGAAGQIGYSLLFRIAAGEMFGKDRPVILQMLELPDEKAQAALKGVMMELEDCAFPLLAGMVGTDNPDIAFKDADVALLVGSRPRGPGMERKDLLMENAKIFTAQGAALNKVARRDVKVLVVGNPANTNAYIAMKSAPDLNPKHFTAMLRLDHNRALSQLSTKLSKPVANIEKLIVWGNHSPTMYPDYRFAT----ADGTPIIEAINDQAW 216
BLAST of CK937738 vs. ExPASy Swiss-Prot
Match: MDH_NOCSJ (Malate dehydrogenase OS=Nocardioides sp. (strain BAA-499 / JS614) GN=mdh PE=3 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 8.146e-52 Identity = 108/219 (49.32%), Postives = 145/219 (66.21%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAW 734 M+ P++V VTGAAGQIGY+L+ +A G +LG D+P+ L +L+I PA +AL GV MEL D AFP + GV DA + GVN+A++VG PR GMER D++S N +I+ AQ AL + AA + ++ V NPANTNALI AP IP + LTRLDHNRA+ Q++ K V+D+K + IWGNHS++QYPDV HA + G + E+V D W Sbjct: 1 MSSTPLKVAVTGAAGQIGYSLLFRLASGSLLG-DRPIELRLLEITPALKALEGVVMELDDCAFPNLAGVQIGDDAEQIFDGVNLALLVGARPRGPGMERGDLLSANGAIFTAQGKALNKVAADDVRIGVTGNPANTNALIAMTNAPDIPQARFSALTRLDHNRAISQLAAKTGAAVTDIKKMTIWGNHSATQYPDVFHAEI----GGRNAAEVVGDQDW 214
BLAST of CK937738 vs. ExPASy Swiss-Prot
Match: MDH_NOCFA (Malate dehydrogenase OS=Nocardia farcinica GN=mdh PE=3 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.815e-51 Identity = 105/215 (48.84%), Postives = 139/215 (64.65%), Query Frame = 3 Query: 90 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAW 734 PV V VTGAAGQI Y L+ IA G MLG P+ L +L+IP A +L GV MEL D AFPL+ + + D G N+A++VG PR GMER D+++ N I+ Q A+ AA + KVLVV NPANTNA I AP +PA+ T +TRLDHNRA+ Q+++K +++ + +WGNHS++QYPD+ HATV AG +P RELV D+ W Sbjct: 9 PVTVTVTGAAGQIAYGLLFRIASGAMLGPHTPIRLRLLEIPAAVASLEGVAMELEDGAFPLLDAIDISDDPWTGFAGANVALLVGARPRTAGMERADLLAANGPIFTDQGQAINAVAADDVKVLVVGNPANTNAFIAMSNAPDVPAERFTAMTRLDHNRAIAQLAKKTGAPATEIHRIAVWGNHSATQYPDLTHATV---AG-RPARELV-DEQW 218
BLAST of CK937738 vs. ExPASy Swiss-Prot
Match: MDH_POLNA (Malate dehydrogenase OS=Polaromonas naphthalenivorans (strain CJ2) GN=mdh PE=3 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 2.370e-51 Identity = 107/221 (48.42%), Postives = 145/221 (65.61%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAA--EALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAW 734 M+K+PVRV VTGAAGQIGYAL+ IA G MLG DQPVIL +L++P +AL GV MEL D AFPL+ + A +D + A + A++VG PR GMER ++++ N +I+ AQ AL A+ + +VLVV NPANTNA I + AP +PAKN T + RLDHNRA QI+ K V+D++ + +WGNHS + Y D AT+ G + V +++ D W Sbjct: 1 MSKKPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEVPVEGPQKALKGVMMELDDCAFPLLVEMTAHSDPMTAFKDADYALLVGSRPRGPGMERAELLAVNGAIFTAQGKALNAVASRDVRVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLRLDHNRAASQIAAKTGKAVADIEKLTVWGNHSPTMYADYRFATI----GGESVAQMINDQEW 217
BLAST of CK937738 vs. ExPASy Swiss-Prot
Match: MDH_XYLFT (Malate dehydrogenase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=mdh PE=3 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 3.096e-51 Identity = 110/219 (50.23%), Postives = 142/219 (64.84%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAW 734 K VRV VTGAAGQIGY+L+ IA G M G D+PVIL ML++P A AL GV MEL D AFPL+ G+V T + A + A++VG PR GMERKD++ +N I+ AQ +AL + A + KVLVV NPANTNA I + AP + K+ T + RLDHNRAL Q+S KL V++++ +I+WGNHS + YPD AT A P+ E + D AW Sbjct: 2 KALVRVAVTGAAGQIGYSLLFRIAAGEMFGKDRPVILQMLELPDEKAQAALKGVMMELEDCAFPLLAGMVVTDNPDIAFKDADAALLVGSRPRGPGMERKDLLMENAKIFTAQGAALNKVARRDVKVLVVGNPANTNAYIAMKSAPDLNPKHFTAMLRLDHNRALSQLSTKLGKPVANIEKLIVWGNHSPTMYPDYRFAT----ADGTPIIEAINDQAW 216
BLAST of CK937738 vs. ExPASy Swiss-Prot
Match: MDH_XYLF2 (Malate dehydrogenase OS=Xylella fastidiosa (strain M23) GN=mdh PE=3 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 3.096e-51 Identity = 110/219 (50.23%), Postives = 142/219 (64.84%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAW 734 K VRV VTGAAGQIGY+L+ IA G M G D+PVIL ML++P A AL GV MEL D AFPL+ G+V T + A + A++VG PR GMERKD++ +N I+ AQ +AL + A + KVLVV NPANTNA I + AP + K+ T + RLDHNRAL Q+S KL V++++ +I+WGNHS + YPD AT A P+ E + D AW Sbjct: 2 KALVRVAVTGAAGQIGYSLLFRIAAGEMFGKDRPVILQMLELPDEKAQAALKGVMMELEDCAFPLLAGMVVTDNPDIAFKDADAALLVGSRPRGPGMERKDLLMENAKIFTAQGAALNKVARRDVKVLVVGNPANTNAYIAMKSAPDLNPKHFTAMLRLDHNRALSQLSTKLGKPVANIEKLIVWGNHSPTMYPDYRFAT----ADGTPIIEAINDQAW 216
BLAST of CK937738 vs. ExPASy Swiss-Prot
Match: MDH_SYNFM (Malate dehydrogenase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=mdh PE=1 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 3.096e-51 Identity = 106/221 (47.96%), Postives = 143/221 (64.71%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAW 734 MAK+PVRV VTGAAGQIGYAL+ +A G MLG DQP+IL ML++P AL GV MEL D AFPL+ ++ T D A + A++VG PR GMERKD++ +N I+ Q A+ A+ + +V+VV NPANTNA I + AP +P N T + RLDHNRA Q++ + V+ V+ +I+WGNHS + YPD+ TV+ +P +LV D+AW Sbjct: 1 MAKKPVRVTVTGAAGQIGYALLFRVASGQMLGPDQPIILQMLELPIDKVQAALKGVMMELEDCAFPLLADMIGTGDPKVAFKDSDYALLVGARPRGPGMERKDLLLENAKIFIEQGKAMNAVASRDIRVIVVGNPANTNAWIAMKSAPDLPKGNFTAMLRLDHNRAKSQLATRTGKPVASVEKMIVWGNHSPTMYPDIRFCTVD----GQPAVKLVNDEAW 217
BLAST of CK937738 vs. ExPASy Swiss-Prot
Match: MDH_LARHH (Malate dehydrogenase OS=Laribacter hongkongensis (strain HLHK9) GN=mdh PE=3 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 3.096e-51 Identity = 109/219 (49.77%), Postives = 145/219 (66.21%), Query Frame = 3 Query: 90 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSI----PAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAW 734 PVRV VTGAAGQIGY+L+ IA G MLG +QPVIL +LD+P A A+ GV MEL D AFPL+ G+VAT D A +I ++VG PR +GMER D++ N +I+ Q A+ ++A + KVLVV NPANTNA I ++ A + PA N T + RLDHNRAL Q++ K V+ ++N+ +WGNHS + Y D ATVN GE V+ ++ D+AW Sbjct: 4 PVRVAVTGAAGQIGYSLLFRIASGEMLGQNQPVILQLLDLPQAQNAVKGVMMELEDCAFPLLAGMVATDDPNVAFKDADICLLVGARPRSKGMERADLLEANGAIFTVQGKAIAENAKEDVKVLVVGNPANTNAYIARKAAEKVGRTNPA-NYTAMLRLDHNRALSQLAAKTGKAVASIENMAVWGNHSPTMYADYRFATVN---GES-VKSMINDEAW 217
BLAST of CK937738 vs. ExPASy Swiss-Prot
Match: MDH_RHOOB (Malate dehydrogenase OS=Rhodococcus opacus (strain B4) GN=mdh PE=3 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 6.896e-51 Identity = 102/215 (47.44%), Postives = 133/215 (61.86%), Query Frame = 3 Query: 90 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAW 734 P V VTGAAG IGYA + IA G MLG D P+ L +L+IPPA A G MEL D+AFPL+ V D G ++A+++G PR +GMER D+++ N I+ Q A+ Q AA +VLVV NPANTNAL+ AP +PA+ T LTRLDHNRA+ Q++ V D+ V IWGNHSS+QYPD+ HA V G++ ++ D W Sbjct: 7 PAVVTVTGAAGSIGYAALFRIAAGAMLGPDTPIRLRLLEIPPAVSAAEGTAMELDDSAFPLLLDVEVHDDPKRGFDGTDVALLIGSRPRSKGMERGDLLAANGQIFTVQGRAINQVAADGVRVLVVGNPANTNALVAANNAPDVPAERFTALTRLDHNRAIAQLARHSGAAVRDISRVTIWGNHSSTQYPDIFHARV----GDRSGADIAADREW 217 The following BLAST results are available for this feature:
BLAST of CK937738 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 213
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937738 ID=CK937738; Name=CK937738; organism=Citrus sinensis; type=EST; length=735bpback to top |