CK937738
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937738 vs. ExPASy Swiss-Prot
Match: MDH_AQUAR (Malate dehydrogenase OS=Aquaspirillum arcticum GN=mdh PE=1 SV=3) HSP 1 Score: 216.083 bits (549), Expect = 1.586e-55 Identity = 112/221 (50.68%), Postives = 149/221 (67.42%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAW 734 MAK P+RV VTGAAGQI Y+L+ IA G MLG DQPVIL +L+IP A +AL GV ME+ D AFPL+ G+ A D + A ++A++VG PR GMERKD++ N I+ Q A++ A+ N KVLVV NPANTNA I + APS+PAKN T + RLDHNRAL QI+ K VS ++ + +WGNHS + Y D +A ++ A+ V++++ DDAW Sbjct: 1 MAKTPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAYIAMKSAPSLPAKNFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNHSPTMYADYRYAQIDGAS----VKDMINDDAW 217
BLAST of CK937738 vs. ExPASy Swiss-Prot
Match: MDH_LEPCP (Malate dehydrogenase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=mdh PE=3 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 2.072e-55 Identity = 113/221 (51.13%), Postives = 146/221 (66.06%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAW 734 M+K PVRV VTGAAGQIGYAL+ IA G MLG DQPVIL +L++P A EAL GV MEL D AFPL+ G+ A +D + A + A++VG PR GMER D+++ N I+ AQ AL A+ N KVLVV NPANTNA I + AP +PAKN T + RLDHNRA QI+ K V+ ++ + +WGNHS + Y D AT+ G + V++++ DD W Sbjct: 1 MSKSPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEVPVEKAQEALKGVIMELEDCAFPLLAGIEAHSDPMTAFKDTDYALLVGARPRGPGMERADLLAANAQIFTAQGKALNAVASRNVKVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLRLDHNRAASQIAAKTGKPVASIEKLAVWGNHSPTMYADYRFATI----GGESVKDMINDDVW 217
BLAST of CK937738 vs. ExPASy Swiss-Prot
Match: MDH_RALPJ (Malate dehydrogenase OS=Ralstonia pickettii (strain 12J) GN=mdh PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.706e-55 Identity = 113/221 (51.13%), Postives = 148/221 (66.97%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAW 734 MAK P+RV VTGAAGQIGYAL+ IA G MLG DQPVIL +L+IP A +AL GV ME+ D AFPL+ G+ A +D + A V++A++VG PR GMER D++S N I+ AQ AL A+ N KVLVV NPANTNA I + AP +P +N T + RLDHNRAL QI+ K VS ++ + +WGNHS + Y D +AT++ K V++++ D W Sbjct: 1 MAKAPMRVAVTGAAGQIGYALLFRIAAGEMLGKDQPVILQLLEIPDEKAQKALKGVMMEIEDCAFPLLAGMQAHSDPMTAFKDVDVALLVGARPRGPGMERADLLSANAQIFTAQGRALNAVASRNVKVLVVGNPANTNAYIAMKSAPDLPRENFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNHSPTMYADYRYATID----GKSVKDMINDPVW 217
BLAST of CK937738 vs. ExPASy Swiss-Prot
Match: MDH_DIAST (Malate dehydrogenase OS=Diaphorobacter sp. (strain TPSY) GN=mdh PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.706e-55 Identity = 115/221 (52.04%), Postives = 146/221 (66.06%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAW 734 M+K+PVRV VTGAAGQIGYAL+ IA G MLG DQPVIL +L+IP A AL GV MEL D AFPL+ G+ A +D + A + A++VG PR GMER D+++ N I+ AQ AL A+ N KVLVV NPANTNA I + AP +PAKN T + RLDHNRA Q++ K +V D+K + +WGNHS + Y D ATV+ K V++ + D AW Sbjct: 1 MSKKPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEIPDEKAQNALKGVIMELEDCAFPLLAGIEAHSDPMTAFKDTDYALLVGARPRGPGMERADLLAANAQIFTAQGKALNAVASRNVKVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLRLDHNRAASQLAAKGGFKVGDIKKLTVWGNHSPTMYADYRFATVD----GKSVKDAINDQAW 217
BLAST of CK937738 vs. ExPASy Swiss-Prot
Match: MDH_SACD2 (Malate dehydrogenase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=mdh PE=3 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 3.534e-55 Identity = 112/214 (52.34%), Postives = 143/214 (66.82%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD 725 K PVRV VTGAAGQI Y+L+ IA G MLG DQPVIL ML+I PA EAL GV MEL D AFPL+ G+V + D A + A++VG PR GMERKD++ N +I+ Q A+ HA+ + KVLVV NPANTNALI + AP I + T + RLDHNR L Q++ KL+V + D+ + IWGNHS++QYPD+ H V G+ V ++ KD Sbjct: 2 KAPVRVAVTGAAGQISYSLLFRIAAGEMLGKDQPVILQMLEITPALEALKGVAMELDDCAFPLLAGMVCSDDPNVAFKDADYALLVGARPRGPGMERKDLLEANAAIFSVQGKAINDHASRDIKVLVVGNPANTNALIAQRNAPDINPRQFTAMMRLDHNRGLSQLAAKLDVTLEDITKMTIWGNHSATQYPDLFHTLVK---GDVAVEQVEKD 212
BLAST of CK937738 vs. ExPASy Swiss-Prot
Match: MDH_HERAR (Malate dehydrogenase OS=Herminiimonas arsenicoxydans GN=mdh PE=3 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 3.534e-55 Identity = 114/221 (51.58%), Postives = 148/221 (66.97%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAW 734 MAK P+RV VTGAAGQIGY+L+ IA G +LG DQPVIL +L+I A AL GV ME+ D AFPL+ GV A +D + A V+IA++VG PR GMERKD++ N I+ Q AL+ A+ N KVLVV NPANTNA I + AP++PAKN T + RLDHNRAL QI+ K V+ ++ + +WGNHS + YPD AT++ K V+E + D+ W Sbjct: 1 MAKAPMRVAVTGAAGQIGYSLLFRIANGDLLGKDQPVILQLLEIDNEKAQNALKGVIMEIDDCAFPLLAGVSAHSDPMTAFKDVDIALLVGARPRGPGMERKDLLEANAQIFTVQGKALDAVASRNVKVLVVGNPANTNAYIAMKSAPNLPAKNFTAMLRLDHNRALSQIAAKTGKPVTAIEKLTVWGNHSPTMYPDYRFATID----GKSVKEAINDEVW 217
BLAST of CK937738 vs. ExPASy Swiss-Prot
Match: MDH_ACISJ (Malate dehydrogenase OS=Acidovorax sp. (strain JS42) GN=mdh PE=3 SV=2) HSP 1 Score: 214.927 bits (546), Expect = 3.534e-55 Identity = 115/221 (52.04%), Postives = 146/221 (66.06%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAW 734 M+K+PVRV VTGAAGQIGYAL+ IA G MLG DQPVIL +L+IP A AL GV MEL D AFPL+ G+ A +D + A + A++VG PR GMER D+++ N I+ AQ AL A+ N KVLVV NPANTNA I + AP +PAKN T + RLDHNRA Q++ K +V D+K + +WGNHS + Y D ATV+ K V++ + D AW Sbjct: 1 MSKKPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEIPDEKAQNALKGVIMELEDCAFPLLAGIEAHSDPMTAFKDTDYALLVGARPRGPGMERADLLAANAQIFTAQGKALNAVASRNVKVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLRLDHNRAASQLAAKGGFKVGDIKKLTVWGNHSPTMYADYRFATVD----GKSVKDAINDPAW 217
BLAST of CK937738 vs. ExPASy Swiss-Prot
Match: MDH2_BURVG (Malate dehydrogenase 2 OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=mdh2 PE=3 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 4.615e-55 Identity = 113/219 (51.60%), Postives = 145/219 (66.21%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAW 734 MAK RV VTGAAGQI Y+L+ IA G +LG DQPVIL +LD+P A A+ GV MEL D AFPL+ GVV T D A ++A++VG PR +GMERKD++S N I+ Q +AL + A+ + KVLVV NPANTNA I + AP +P KN T + RLDHNRAL Q++ K V+ ++ + +WGNHS + YPD A TA GE ++ LV DD W Sbjct: 1 MAKPAKRVAVTGAAGQIAYSLLFRIANGDLLGKDQPVILQLLDLPQAQAAVKGVVMELEDCAFPLLAGVVITDDPKVAFKDADVALLVGARPRSKGMERKDLLSANAEIFTVQGAALNEVASRDVKVLVVGNPANTNAYIAMKSAPDLPKKNFTAMLRLDHNRALSQLAAKTGKPVASIEKLAVWGNHSPTMYPDFRFA---TAEGESMLK-LVNDDVW 215
BLAST of CK937738 vs. ExPASy Swiss-Prot
Match: MDH1_BURTA (Malate dehydrogenase 1 OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=mdh1 PE=3 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 4.615e-55 Identity = 113/219 (51.60%), Postives = 146/219 (66.67%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAW 734 MAK RV VTGAAGQI Y+L+ IA G +LG DQPVIL +LD+P A A+ GV MEL D AFPL+ GVV T D A ++A++VG PR +GMERKD++S N I+ Q +AL + A+ + KVLVV NPANTNA I + AP +P KN T + RLDHNRAL Q++ K V+ ++ + +WGNHS + YPD A TA GE + +L+ DDAW Sbjct: 1 MAKPAKRVAVTGAAGQIAYSLLFRIANGDLLGKDQPVILQLLDLPQAQAAVKGVVMELDDCAFPLLAGVVITDDPKVAFKDADVALLVGARPRSKGMERKDLLSANAEIFTVQGAALNEVASRDVKVLVVGNPANTNAYIAMKSAPDLPKKNFTAMLRLDHNRALSQLAAKSGKPVASIEKLAVWGNHSPTMYPDFRFA---TAEGES-LLKLINDDAW 215
BLAST of CK937738 vs. ExPASy Swiss-Prot
Match: MDH1_RHOFD (Malate dehydrogenase 1 OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=mdh1 PE=3 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 6.028e-55 Identity = 112/221 (50.68%), Postives = 151/221 (68.33%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAW 734 M+K+PVRV VTGAAGQIGYA++ IA G MLG DQPVIL +L++P A +AL GV MEL D AFPL+ G+ A +D + A V+ A+++G PR GMER ++++ N +I+ AQ AL A+ N KVLVV NPANTNA I + AP +PAKN T + RLDHNRAL Q++ K V+D++ + +WGNHS + Y D AT+N GE V++++ D W Sbjct: 1 MSKKPVRVAVTGAAGQIGYAILFRIASGEMLGKDQPVILQLLEVPVEKAQQALQGVMMELQDCAFPLLAGMEAHSDPMTAFKDVDYALLIGSRPRGPGMERAELLAVNGAIFTAQGKALNAVASRNVKVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLRLDHNRALSQLASKTGKAVADIEKMAVWGNHSPTMYADYRFATIN---GES-VKDMINDQDW 217 The following BLAST results are available for this feature:
BLAST of CK937738 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 213
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937738 ID=CK937738; Name=CK937738; organism=Citrus sinensis; type=EST; length=735bpback to top |