CK937736

Overview
NameCK937736
Unique NameCK937736
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length816
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937736 vs. ExPASy Swiss-Prot
Match: BURP3_ORYSJ (BURP domain-containing protein 3 OS=Oryza sativa subsp. japonica GN=BURP3 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.741e-24
Identity = 71/218 (32.57%), Postives = 101/218 (46.33%), Query Frame = 1
Query:   46 FFRESMLKTGTVMPMPDIRDKMPQRSFLPRAIVSKLPFSSSNVNVLKEIFHASENSSMESIIKDALSECERQPSKGETKRCIGSAEDMIDFATSVLGNSVTLRTTQNVQGS----KQNIMIGSVK-GINGGKVTQSVSCHQRLFPYLLYYCHSVPKVRVYEADLLDPKTKAKINHGVAICHIDTSAWSQTHGAFLALGSGPGRIEVCHWIFENDLTWT 684
            FF E  L  G  M +        ++ FLPR+    +PFSS  V  +   F     S   + +   L +CE  P++GE K C  S E M+DFATS LG S  +R    V G     +Q   + +VK    GG   Q V+CH   + Y ++ CH     R Y   +            VA+CH DT+ W+  H AF  L   PG + VCH++ ++ + WT
Sbjct:  213 FFLEKDLHPGKTMAVHFTATTAGEK-FLPRSEADAMPFSSEKVPEILSRFSVKPGSVEAAEMAQTLRDCEAPPAQGERKACATSLESMVDFATSSLGTS-HVRAASTVVGKEGSPEQEYTVTAVKRAAAGGDQDQLVACHAEPYAYAVFACHLTRATRAYAVSMAGRDGTGV--EAVAVCHADTAGWNPKHVAFQVLKVKPGTVPVCHFLPQDHVVWT 426          
BLAST of CK937736 vs. ExPASy Swiss-Prot
Match: BURPH_ORYSJ (BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica GN=BURP17 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 9.555e-23
Identity = 63/195 (32.31%), Postives = 92/195 (47.18%), Query Frame = 1
Query:  124 FLPRAIVSKLPFSSSNVNVLKEIFHASENSSMESIIKDALSECERQPSKGETKRCIGSAEDMIDFATSVLGNS-------VTLRTTQNVQGSKQNIMIGSVKGINGGKVTQSVSCHQRLFPYLLYYCH-SVPKVRVYEADLLDPKTKAKINHGVAICHIDTSAWSQTHGAFLALGSGPGRIEVCHWIFENDLTWT 684
            FLPR     +PFSS  +  + + F     S   + +   L +CE   +KGE K C  S E ++DF TS  G S       V L          Q+  +  V+ + G    Q ++CH   +PY ++ CH +    R Y+A L+     A     VA+CH DTS W+  H AF  LG  PG + VCH++  + + WT
Sbjct:  392 FLPRGKADSIPFSSKELPEILDRFGVRPGSDDAAEMSATLQDCELPANKGEKKACATSLESIVDFVTSSFGASDVDAASTVVLSKAVESSSLAQDYTVSGVRRMAG--TGQLIACHPESYPYAVFMCHLTEATTRAYKASLVGKDGTAV--EAVAVCHTDTSDWNPEHAAFHVLGVKPGTVPVCHFMQPDAVVWT 582          
BLAST of CK937736 vs. ExPASy Swiss-Prot
Match: RD22_ARATH (Dehydration-responsive protein RD22 OS=Arabidopsis thaliana GN=RD22 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.248e-22
Identity = 64/193 (33.16%), Postives = 92/193 (47.67%), Query Frame = 1
Query:  121 SFLPRAIVSKLPFSSSNVNVLKEIFHASENSSMESIIKDALSECERQPSKGETKRCIGSAEDMIDFATSVLGN-----SVTLRTTQNVQGSKQNIMIGSVKGINGGKVTQSVSCHQRLFPYLLYYCHSVPKVRVYEADLL-DPKTKAKINHGVAICHIDTSAWSQTHGAFLALGSGPGRIEVCHWIFENDLTW 681
            +FLPR     +PF S   +   + F     S    ++K  + ECE +   GE K C  S E M+DF+ S LG        T    +N    K  I    VK ++  K   SV CH++ +P+ ++YCH      VY   L  +   +AK    VA+CH +TSAW+  H AF  L   PG + VCH++ E  + W
Sbjct:  203 AFLPRGEAETVPFGSEKFSETLKRFSVEAGSEEAEMMKKTIEECEARKVSGEEKYCATSLESMVDFSVSKLGKYHVRAVSTEVAKKNAPMQKYKIAAAGVKKLSDDK---SVVCHKQKYPFAVFYCHKAMMTTVYAVPLEGENGMRAK---AVAVCHKNTSAWNPNHLAFKVLKVKPGTVPVCHFLPETHVVW 389          
BLAST of CK937736 vs. ExPASy Swiss-Prot
Match: RAF1A_WHEAT (Protein RAFTIN 1A OS=Triticum aestivum GN=RAFTIN1A PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.526e-20
Identity = 60/215 (27.91%), Postives = 96/215 (44.65%), Query Frame = 1
Query:   46 FFRESMLKTGTVMPMPDIRDKMPQRSFLPRAIVSKLPFSSSNVNVLKEIFHASENSSMESIIKDALSECERQPSKGETKRCIGSAEDMIDFATSVLGN---SVTLRTTQNVQGSKQNIMIGSVKGINGGKVTQSVSCHQRLFPYLLYYCHSVPKVRVYEADLLDPKTKAKINHGVAICHIDTSAWSQTHGAFLALGSGPGRIEVCHWIFENDLTW 681
            FF E  ++ G  +P            FLPR +   +PF+++ +  +   F  + +S+  + ++  L  CE     GE+K C  S E +++ A  VLG         T        Q   + SV+ + GG V   V+CH   +PY +Y CH+    R Y  D+   +    +     +CH DTS W+  H +F  LG+ PG   VCH +    + W
Sbjct:  169 FFHEEAVRVGKRLPFRFPPATPAALGFLPRQVADSVPFTTAALPGVLATFGVASDSATVASMEATLRACESPTIAGESKFCATSLEALVERAMEVLGTRDIRPVTSTLPRAGAPLQTYTVRSVRPVEGGPV--FVACHDEAYPYTVYRCHTTGPSRAYMVDMEGARGGDAVTI-ATVCHTDTSLWNPEHVSFKLLGTKPGGTPVCHLMPYGHIIW 380          
BLAST of CK937736 vs. ExPASy Swiss-Prot
Match: RAF1B_WHEAT (Protein RAFTIN 1B OS=Triticum aestivum GN=RAFTIN1B PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.992e-20
Identity = 60/215 (27.91%), Postives = 98/215 (45.58%), Query Frame = 1
Query:   46 FFRESMLKTGTVMPMPDIRDKMPQRSFLPRAIVSKLPFSSSNVNVLKEIFHASENSSMESIIKDALSECERQPSKGETKRCIGSAEDMIDFATSVLGNSVTLRTTQNVQGSK---QNIMIGSVKGINGGKVTQSVSCHQRLFPYLLYYCHSVPKVRVYEADLLDPKTKAKINHGVAICHIDTSAWSQTHGAFLALGSGPGRIEVCHWIFENDLTW 681
            FF E  ++ G  +P            FLPR +   +PF+++ +  +   F  + +S+    ++  L  CE     GE+K C  S E +++ A  VLG       T  +  +    Q   + +V+ + GG V   V+CH   +PY +Y CH+    R Y  D+   +    +    A+CH DTS W+  H +F  LG+ PG   VCH +    + W
Sbjct:  142 FFHEEAVRVGRRLPFHFPPATPAALGFLPRQVADSVPFTTAALPGILATFGIASDSTTVPSMEATLRACESPTIAGESKFCATSLEALVERAMGVLGTRDIRPVTSTLPRAGAPLQTYTVVAVQPVEGGPVF--VACHDEAYPYTVYRCHTTGPSRAYTVDMEGARGADAVTIA-AVCHTDTSLWNPEHVSFKLLGTKPGGTPVCHLMPYGHIIW 353          
BLAST of CK937736 vs. ExPASy Swiss-Prot
Match: BURPA_ORYSJ (BURP domain-containing protein 10 OS=Oryza sativa subsp. japonica GN=BURP10 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.865e-18
Identity = 67/233 (28.76%), Postives = 109/233 (46.78%), Query Frame = 1
Query:   49 FRESMLKTGTVMPMPDIRDKMPQRSFLPRAIVSKLPFSSSNVNVLKEIFHASENSSMESIIKDALSECER-QPSKGETKRCIGSAEDMIDFATSVLGNSVTLRTTQNVQ------GSKQNIM-IGSVKGINGGKVTQSVSCHQRLFPYLLYYCHSVPKVRVYEADLLDPKTKAKINHG-------VAICHIDTSAWSQTHGAFLALGSGPGRIEVCHWIFENDLTWTIVDRMV 702
            F E  LK G+++  P I     +  FL R I   +P S+ N   +  +F +  +  M   I+ AL  CE  +P KGE + C  S E +++FA SVLG       + +V       G+   ++ + +V G+ G  VT    CH   FP+ ++YCH++   RVY   L   +  +    G       +A+CH+DTS +      F+     PG   VCH++  + + W  V  ++
Sbjct:  113 FLEDALKPGSIIT-PYITGIATRAPFLRRDIADSIPVSTKNFADILAMF-SPISLVMADGIQSALDTCEHHRPIKGEERACATSIESVVEFAMSVLGTRDLRAFSPDVPPEGIMPGNMYKVVAVRTVAGLRGDTVT----CHTMRFPFAVFYCHAINPTRVYAVVLESEEDGSGSGSGTPEKMEALAVCHLDTSRFDPKTPLFVEHNLRPGDASVCHFVSRDSVIWAPVAAVI 339          
BLAST of CK937736 vs. ExPASy Swiss-Prot
Match: BURPD_ORYSJ (BURP domain-containing protein 13 OS=Oryza sativa subsp. japonica GN=BURP13 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.062e-17
Identity = 52/217 (23.96%), Postives = 99/217 (45.62%), Query Frame = 1
Query:   46 FFRESMLKTGTVMPMPDIRDKMPQRSFLPRAIVSKLPFSSSNVNVLKEIFHASENSSMESIIKDALSECERQPSKGETKRCIGSAEDMIDFATSVLGNSVTLRTTQNVQGSKQNIMIGSVKGINGGKVTQSVSCHQRLFPYLLYYCHSVPKVRVYEADLLDPKTKAKINHGVA-----ICHIDTSAWSQTHGAFLALGSGPGRIEVCHWIFENDLTW 681
            FF E  ++ G  +P            FLPR +   +PF+++ +  +  +F  + +++  + +++ L  CE     GE+K C  S E +++ A + LG          +      +   +V+ +   +    V+CH + +PY +Y CH+    R Y   +++ +     + G A     +CH +TS W+  H +F  LG+ PG   VCH +    + W
Sbjct:  190 FFHEEAVRVGERLPFYFPAATTSALGFLPRRVADSIPFTAAALPAVLALFGVAPDTAEAAGMRETLRTCEWPTLAGESKFCATSLEALVEGAMAALGTRDIAALASTLPRGGAPLQAYAVRAVLPVEGAGFVACHDQAYPYTVYRCHTTGPARAY---MVEMEGDGGGDGGEAVTVATVCHTNTSRWNPEHVSFKLLGTKPGGSPVCHLMPYGHIVW 403          
BLAST of CK937736 vs. ExPASy Swiss-Prot
Match: BURPB_ORYSJ (BURP domain-containing protein 11 OS=Oryza sativa subsp. japonica GN=BURP11 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.835e-17
Identity = 63/244 (25.82%), Postives = 102/244 (41.80%), Query Frame = 1
Query:   46 FFRESMLKTGTVMPMPDIRDKMPQRSFLPRAIVSKLPFSSSNVNVLKEIFHASENSSMESIIKDALSECERQPSK---GETKRCIGSAEDMIDFATSVLGNS-----------VTLRTTQNVQGSKQNIMIGSVKGINGGKVTQS--------VSCHQRLFPYLLYYCHSVPKVRVYEADLLDPKTKAKINHG----------VAICHIDTSAWSQTHGAFLALGSGPGRIEVCHWIFENDLTW 681
            FFR+++     + P       +P  +FLPR +   +PFS+     +  +F A  + +M   I+ AL  C ++ +    GE   C  S E + D A S+LG                 TT   +G      +  +  + G   + S        V+CH   +PY ++YCHS      Y   L+   T      G          +A+CH+DTS W   +  F+A G  PG + VCH++ +  + W
Sbjct:   75 FFRDALRPGSVITPTIPPTTSLP--AFLPRHVADAIPFSADRFADVLAMF-APASLAMAREIRWALDTCGQRAAALLPGEKAGCATSLESLADLAASLLGTRDVRAFSAADLPTDAATTPARRGRYNVTSVRELSAMAGSGSSSSSEPAPAAVVACHDLTYPYAVFYCHSTKPTAAYAVTLVAATTGDGDGEGEAASPAKMEALAVCHLDTSRWRADNPFFVAHGVKPGEVSVCHFLTKLSIVW 315          
BLAST of CK937736 vs. ExPASy Swiss-Prot
Match: BURP6_ORYSJ (BURP domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=BURP6 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.633e-16
Identity = 63/219 (28.77%), Postives = 101/219 (46.12%), Query Frame = 1
Query:   46 FFRESMLKTGTVMPMPDIRDKMPQRSFLPRAIVSKLPFSSSNVNVLKEIFHASENSSMESIIKDALSECERQPSKGETKRCIGSAEDMIDFATSVLG----NSVTLRTTQNVQGSKQNIMIGSVK--GINGGKVTQSVSCHQRLFPYLLYYCHSVPKVRVYEADLLDPK-TKAKINHGVAICHIDTSAWSQTHGAFLALGSGPGRIEVCHWIFENDLTW 681
            FF E  L  G+ M +   R      + LPR     +PF+S  +  +         S     ++  L+ECE  P  GE KRC  S E M++FA S LG    ++V+    +     +Q   + +V+   ++GG +   V+CH   + Y ++ CH+      Y   L     TKA+    +A CH  T A  +   A+  LG  PG + VCH++ ++D+ W
Sbjct:   28 FFLEKDLFPGSKMTLHFTR-ATAGAALLPRGRADSVPFASEKLPEILSQLSVPAGSPAADAMRSTLAECEAAPQAGEAKRCATSLESMVEFAASSLGTRDVHAVSTEVDRAGPTPRQAYRVEAVRPVPVSGGDM---VACHGMAYAYAVFGCHTT-TAAAYTVTLAGADGTKAE---ALAACH--TDAAPRVAEAYKRLGVAPGSVPVCHFLPQDDMLW 236          
BLAST of CK937736 vs. ExPASy Swiss-Prot
Match: BURP9_ORYSJ (BURP domain-containing protein 9 OS=Oryza sativa subsp. japonica GN=BURP9 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.578e-15
Identity = 57/218 (26.15%), Postives = 95/218 (43.58%), Query Frame = 1
Query:   46 FFRESMLKTGTVMPMPDIRDKMPQRSFLPRAIVSKLPFSSSNVNVLKEIFHASENSSMESIIKDALSECERQPS-KGETKRCIGSAEDMIDFATSVLGNSVTLRTTQNVQGSKQNIMIGSVKGINGGKVTQSV-SCHQRLFPYLLYYCHSVPKVRVYEADLLDPKTKAKINHG-VAICHIDTSAWSQTHGAFLALGSGPGRIEVCHWIFENDLTWTIV 690
            +F E  L  G+V+ +  I        FL R     +PFS  N+  +  +F +  +++M   I   L  CE      GE  +C  S E ++D   S LG  +    T          +   V        +QS+ +CH  L+PY +++CH+  + R+Y+  L+  ++   +  G +A+CH +TS W   H  F  +   PG    CH+     + W  V
Sbjct:  292 YFFEDNLAPGSVL-ITRILSARQSSIFLHRNNSKHIPFSMKNITDILTMF-SPVSATMADGIAATLQACEHTGMVHGEKAKCATSIESLLDVVVSSLGTKLVRALTPGAPMEGVPSLRYIVASATPVPNSQSMLACHDMLYPYKVFFCHTPKQTRLYQVSLVSGESGRPLIDGLLAVCHQNTSDWDTGHPFFHFMDVKPGETTACHFFGRGSIIWVPV 507          
The following BLAST results are available for this feature:
BLAST of CK937736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
BURP3_ORYSJ1.741e-2432.57BURP domain-containing protein 3 OS=Oryza sativa s... [more]
BURPH_ORYSJ9.555e-2332.31BURP domain-containing protein 17 OS=Oryza sativa ... [more]
RD22_ARATH1.248e-2233.16Dehydration-responsive protein RD22 OS=Arabidopsis... [more]
RAF1A_WHEAT1.526e-2027.91Protein RAFTIN 1A OS=Triticum aestivum GN=RAFTIN1A... [more]
RAF1B_WHEAT1.992e-2027.91Protein RAFTIN 1B OS=Triticum aestivum GN=RAFTIN1B... [more]
BURPA_ORYSJ1.865e-1828.76BURP domain-containing protein 10 OS=Oryza sativa ... [more]
BURPD_ORYSJ2.062e-1723.96BURP domain-containing protein 13 OS=Oryza sativa ... [more]
BURPB_ORYSJ7.835e-1725.82BURP domain-containing protein 11 OS=Oryza sativa ... [more]
BURP6_ORYSJ6.633e-1628.77BURP domain-containing protein 6 OS=Oryza sativa s... [more]
BURP9_ORYSJ9.578e-1526.15BURP domain-containing protein 9 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004482_E01 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0001_IVF_E01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937736 ID=CK937736; Name=CK937736; organism=Citrus sinensis; type=EST; length=816bp
GGGTCGGTGAATAACAATAATAATAAATGGGTGGAGCCGAGGAAGTTCTT
CCGCGAGTCTATGCTGAAGACGGGAACTGTGATGCCAATGCCTGACATTC
GAGATAAAATGCCTCAAAGGTCGTTTCTGCCCCGGGCTATCGTTTCCAAG
TTACCATTTTCGAGTTCCAATGTAAACGTACTCAAGGAAATATTCCATGC
AAGTGAAAATTCTAGCATGGAGAGCATAATCAAGGATGCGTTGAGTGAGT
GTGAGCGGCAACCAAGCAAGGGCGAGACCAAACGGTGCATTGGCTCAGCC
GAGGATATGATTGACTTCGCCACCTCAGTACTCGGAAACAGCGTGACTCT
TCGTACAACTCAGAACGTGCAAGGGTCAAAGCAGAACATTATGATTGGTT
CAGTGAAGGGAATCAACGGTGGCAAAGTCACCCAATCTGTCTCTTGTCAC
CAAAGATTGTTTCCATATTTGCTATACTACTGCCACTCCGTTCCAAAAGT
GAGGGTGTATGAAGCTGATTTATTGGATCCCAAAACCAAGGCTAAAATCA
ATCACGGTGTTGCCATCTGTCACATCGATACGTCTGCTTGGAGCCAGACT
CATGGAGCATTCTTGGCTTTGGGTTCGGGTCCAGGGCGGATCGAAGTTTG
TCACTGGATTTTCGAGAATGATTTGACTTGGACCATTGTTGATCGTATGG
TTTAGCTAGCCGTTTTAATTCATTATTTGGCTATAAGTTGTATTAGCTAG
CTAGCTAGCTATGCGATTTGCTTCCAGCTCAGTGTGTTTGTGTGATTAAG
TTCACACGCTTGTTCT
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