CK937727
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937727 vs. ExPASy Swiss-Prot
Match: ERA_RICFE (GTP-binding protein era homolog OS=Rickettsia felis GN=era PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.081e-11 Identity = 33/93 (35.48%), Postives = 59/93 (63.44%), Query Frame = 3 Query: 429 SVAVGIIGAPNAGKSSIINYMVGTKVSAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFD 707 +++ IIG PN+GKS+++N ++G K+S V+ K TT + G++T DTQ+ ++DTPG+ K K V AWS+++ +++M++ D Sbjct: 6 TISFCIIGRPNSGKSTLLNRIIGEKLSIVTPKVQTTRSIITGIITLKDTQVILYDTPGIFEPKGTLE----KAMVRCAWSSLHSADLVMLIID 94
BLAST of CK937727 vs. ExPASy Swiss-Prot
Match: ERA_RICPR (GTP-binding protein era homolog OS=Rickettsia prowazekii GN=era PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.412e-11 Identity = 35/93 (37.63%), Postives = 58/93 (62.37%), Query Frame = 3 Query: 429 SVAVGIIGAPNAGKSSIINYMVGTKVSAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFD 707 +++V IIG PN+GKS+++N ++G K+S V+ K TT + G++T DTQI ++DTPG+ K K V AWS+V ++++ + D Sbjct: 8 TISVCIIGRPNSGKSTLLNRIIGEKLSIVTPKVQTTRSIITGIVTLKDTQIILYDTPGIFEPKGMLE----KAMVRCAWSSVYSADLVLSIID 96
BLAST of CK937727 vs. ExPASy Swiss-Prot
Match: ERA_BRASO (GTP-binding protein era homolog OS=Bradyrhizobium sp. (strain ORS278) GN=era PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.412e-11 Identity = 40/124 (32.26%), Postives = 67/124 (54.03%), Query Frame = 3 Query: 438 VGIIGAPNAGKSSIINYMVGTKVSAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRVLCMN 809 V +IGAPN GKS+++N +VG+KV+ VSRK TT + G++ + +QI + DTPG+ K + V +AWS + +++ V+ D + L +I K A +++L +N Sbjct: 17 VALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIEGQSQIILVDTPGIFSPKRRLD----RAMVTTAWSGAHDADLVCVLLDAKKGLDDEAQAII------DKAASVAHEKILVVN 130
BLAST of CK937727 vs. ExPASy Swiss-Prot
Match: ERA_OLICO (GTP-binding protein era homolog OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=era PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.844e-11 Identity = 36/107 (33.64%), Postives = 59/107 (55.14%), Query Frame = 3 Query: 438 VGIIGAPNAGKSSIINYMVGTKVSAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIE 758 V +IGAPN GKS+++N +VG+KV+ VSRK TT + G++ + + QI + DTPG+ K + V +AWS + +++ V+ D L + +E Sbjct: 18 VALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVVEGNAQIVLVDTPGIFTPKRRLD----RAMVSTAWSGAHDADMVCVLLDARAGLDEEAEAIFTKLE 120
BLAST of CK937727 vs. ExPASy Swiss-Prot
Match: ERA_BRASB (GTP-binding protein era homolog OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=era PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.844e-11 Identity = 40/124 (32.26%), Postives = 67/124 (54.03%), Query Frame = 3 Query: 438 VGIIGAPNAGKSSIINYMVGTKVSAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRVLCMN 809 V +IGAPN GKS+++N +VG+KV+ VSRK TT + G++ + +QI + DTPG+ K + V +AWS + +++ V+ D + L +I K A +++L +N Sbjct: 18 VALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIEGTSQIILVDTPGIFSPKRRLD----RAMVTTAWSGAHDADLVCVLLDAKKGLDDEAQAII------DKAAAVAHQKILVVN 131
BLAST of CK937727 vs. ExPASy Swiss-Prot
Match: ERA_VIBCH (GTP-binding protein era homolog OS=Vibrio cholerae GN=era PE=3 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 3.146e-11 Identity = 44/124 (35.48%), Postives = 65/124 (52.42%), Query Frame = 3 Query: 438 VGIIGAPNAGKSSIINYMVGTKVSAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRVLCMN 809 V I+G PN GKS+++N ++G K+S SRK TT H ++GV T + Q DTPGL + + ++ + S+ S VNL VL VV H T+ D V +++ VLC+N Sbjct: 34 VAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVETDGNYQAIYVDTPGLHIEEKRAINRLMNRAASSSLSDVNL--VLFVVEGT--HWTADDEMVFTKLQKANFPV------VLCVN 147
BLAST of CK937727 vs. ExPASy Swiss-Prot
Match: ERA_RICTY (GTP-binding protein era homolog OS=Rickettsia typhi GN=era PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.146e-11 Identity = 34/93 (36.56%), Postives = 58/93 (62.37%), Query Frame = 3 Query: 429 SVAVGIIGAPNAGKSSIINYMVGTKVSAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFD 707 +++V IIG PN+GKS+++N ++G K+S V+ K TT + G++T DTQI ++DTPG+ K K V AWS++ ++++ + D Sbjct: 8 TISVCIIGRPNSGKSTLLNRIIGEKLSIVTPKVQTTRSIITGIITLKDTQIILYDTPGIFEPKGMLE----KAMVRCAWSSLYSADLVLSIID 96
BLAST of CK937727 vs. ExPASy Swiss-Prot
Match: ERA_VIBVY (GTP-binding protein era homolog OS=Vibrio vulnificus (strain YJ016) GN=era PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.366e-11 Identity = 41/124 (33.06%), Postives = 64/124 (51.61%), Query Frame = 3 Query: 438 VGIIGAPNAGKSSIINYMVGTKVSAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRVLCMN 809 + I+G PN GKS+++N ++G K+S SRK TT H ++GV T D Q DTPGL + + ++ + S+ S VNL L+ H T+ D V+ +++ VLC+N Sbjct: 29 IAIVGRPNVGKSTLLNKILGQKISITSRKPQTTRHRIMGVDTDGDYQAIYVDTPGLHIEEKRAINRLMNRAANSSLSDVNLVFFLV----DGTHWTNDDEMVLNKLQKANFPV------VLCVN 142
BLAST of CK937727 vs. ExPASy Swiss-Prot
Match: ERA_VIBVU (GTP-binding protein era homolog OS=Vibrio vulnificus GN=era PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.366e-11 Identity = 41/124 (33.06%), Postives = 64/124 (51.61%), Query Frame = 3 Query: 438 VGIIGAPNAGKSSIINYMVGTKVSAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRVLCMN 809 + I+G PN GKS+++N ++G K+S SRK TT H ++GV T D Q DTPGL + + ++ + S+ S VNL L+ H T+ D V+ +++ VLC+N Sbjct: 29 IAIVGRPNVGKSTLLNKILGQKISITSRKPQTTRHRIMGVDTDGDYQAIYVDTPGLHIEEKRAINRLMNRAANSSLSDVNLVFFLV----DGTHWTNDDEMVLNKLQKANFPV------VLCVN 142
BLAST of CK937727 vs. ExPASy Swiss-Prot
Match: ERA_VIBPA (GTP-binding protein era homolog OS=Vibrio parahaemolyticus GN=era PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.153e-11 Identity = 41/124 (33.06%), Postives = 63/124 (50.81%), Query Frame = 3 Query: 438 VGIIGAPNAGKSSIINYMVGTKVSAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRVLCMN 809 + I+G PN GKS+++N ++G K+S SRK TT H ++GV T D Q DTPGL + + ++ + S+ S VNL L+ H T D V+ +++ VLC+N Sbjct: 29 IAIVGRPNVGKSTLLNKILGQKISITSRKPQTTRHRIMGVDTDGDYQAIYVDTPGLHIEEKRAINRLMNRAANSSLSDVNLVFFLV----DGTHWTKDDEMVLTKLQKSNFPV------VLCVN 142 The following BLAST results are available for this feature:
BLAST of CK937727 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937727 ID=CK937727; Name=CK937727; organism=Citrus sinensis; type=EST; length=868bpback to top |