CK937722
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937722 vs. ExPASy Swiss-Prot
Match: CCSA_POPAL (Cytochrome c biogenesis protein ccsA OS=Populus alba GN=ccsA PE=3 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 9.262e-53 Identity = 115/198 (58.08%), Postives = 134/198 (67.68%), Query Frame = -1 Query: 5 VVSIGITIYLITFLVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSL--SARNDYRY 592 VVSI I I+ +T LV+E GLY SSE+GM T FCLTGLLITRW+YS H P+SDLYE IH + FK ++N+LS ITAPS FFTQGFAT G LT MHQS+ILVPALQ QWL+MHVSMMV GY LVITFRKVIR+ K N +N SF EIQYM EKK++F N+ S+RN YR+ Sbjct: 17 VVSIVIIIHFLTLLVNEFVGLYDSSEKGMLTTFFCLTGLLITRWIYSGHLPISDLYESLIFLSWIFSIIHMVPYFKKHKNYLSTITAPSTFFTQGFATWGLLTDMHQSKILVPALQSQWLIMHVSMMVSGYAALLCGSLLSAALLVITFRKVIRIVGKNNNL--LNDSFPVDEIQYMMEKKSIFKNTFFPSSRNYYRF 212
BLAST of CK937722 vs. ExPASy Swiss-Prot
Match: CCSA_POPTR (Cytochrome c biogenesis protein ccsA OS=Populus trichocarpa GN=ccsA PE=3 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 4.596e-52 Identity = 114/198 (57.58%), Postives = 133/198 (67.17%), Query Frame = -1 Query: 5 VVSIGITIYLITFLVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSL--SARNDYRY 592 VVSI I I+ +T LV+E GLY SSE+GM T FCLTGLLITRW+YS H P+SDLYE IH + FK ++N+LS ITAPS FFTQGFAT G LT MHQS+ILVPALQ QWL+MHVSMMV GY LVITFRKVIR+ K N +N SF EIQYM EKK++ N+ S+RN YR+ Sbjct: 17 VVSIVIIIHFLTLLVNEFVGLYDSSEKGMLTTFFCLTGLLITRWIYSGHLPISDLYESLIFLSWIFSIIHMVPYFKKHKNYLSTITAPSTFFTQGFATWGLLTDMHQSKILVPALQSQWLIMHVSMMVSGYAALLCGSLLSAALLVITFRKVIRIVGKNNNL--LNDSFPVDEIQYMMEKKSILKNTFFPSSRNYYRF 212
BLAST of CK937722 vs. ExPASy Swiss-Prot
Match: CCSA_CUCSA (Cytochrome c biogenesis protein ccsA OS=Cucumis sativus GN=ccsA PE=3 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 2.281e-51 Identity = 112/199 (56.28%), Postives = 132/199 (66.33%), Query Frame = -1 Query: 8 VVSIGITIYLITFLVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLS--AITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNDYR 592 V+SI ITI LIT L++E GLY SSE+GM AT FC+TGLL+TRW+Y RH PLSDLYE IH FK +NHLS AITAPS FTQGFATSGFLT+MHQS +LVPALQ WLMMHVSMMVLGY +VITF+K IR+F K N +N F F+EIQY+NE N+ S++N Y+ Sbjct: 17 VISIVITIQLITLLINETVGLYVSSEKGMIATFFCITGLLVTRWIYLRHLPLSDLYESLLFLSWAFSIIHLFTYFKKYKNHLSVSAITAPSTIFTQGFATSGFLTEMHQSPLLVPALQSHWLMMHVSMMVLGYAALLCGSLFSVALIVITFQKAIRIFCKNNNL--LNALFSFNEIQYINEGNYFVRNTSFFSSKNYYK 213
BLAST of CK937722 vs. ExPASy Swiss-Prot
Match: CCSA_LIRTU (Cytochrome c biogenesis protein ccsA OS=Liriodendron tulipifera GN=ccsA PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 3.891e-51 Identity = 113/198 (57.07%), Postives = 133/198 (67.17%), Query Frame = -1 Query: 5 VVSIGITIYLITFLVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNDYRY 592 ++SI ITI+L+T LV EI GL SE+GM A FC+TGLL+TRW+YSRHFPLSDLYE IH + N++N LSAITAPSA FTQGFATSG T+MHQS ILVPALQ QWLMMHVSMM+L Y LVITFRK I + K + + GSF F EI Y+NEK+NV N+ LS RN +RY Sbjct: 17 IISIVITIHLVTLLVHEIVGLCDPSEKGMIAAFFCITGLLVTRWIYSRHFPLSDLYESLMFLSWSFSIIHMVPKIWNHKNDLSAITAPSAIFTQGFATSGLSTEMHQSAILVPALQSQWLMMHVSMMLLSYAALLCGSLLSVALLVITFRKNIGIVGKSNHL--LIGSFSFDEIHYLNEKRNVLQNTSFLSFRNYHRY 212
BLAST of CK937722 vs. ExPASy Swiss-Prot
Match: CCSA_SPIOL (Cytochrome c biogenesis protein ccsA OS=Spinacia oleracea GN=ccsA PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 2.522e-50 Identity = 114/198 (57.58%), Postives = 136/198 (68.69%), Query Frame = -1 Query: 8 VSIGITIYLITFLVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYEXXXXXXXXXXXIHKIFDF-KNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRK-VIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSA--RNDYR 589 VS+ IT++LIT LV+EI GLY S E+GM T FC+TGLL+TRWVY +HFPLSDLYE IH I F K +N L+ ITAPSA FTQGFATSG LT+MHQS ILVPALQ QWLMMHVSMMVLGY L+I F+K +I++F KRK+ +N SF F EIQY+NEK N+ N+ + RN YR Sbjct: 18 VSVVITLHLITLLVNEIVGLYNSLEKGMLVTFFCITGLLVTRWVYWKHFPLSDLYESLIFLSWSFYLIHMIPSFLKKEKNSLNVITAPSAIFTQGFATSGLLTEMHQSGILVPALQSQWLMMHVSMMVLGYAALLGGSLLSVTLLIIIFQKDLIQVFDKRKHL--LNESFFFGEIQYINEKSNIVQNASPSYVRNYYR 213
BLAST of CK937722 vs. ExPASy Swiss-Prot
Match: CCSA_CALFG (Cytochrome c biogenesis protein ccsA OS=Calycanthus floridus var. glaucus GN=ccsA PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 2.522e-50 Identity = 111/200 (55.50%), Postives = 135/200 (67.50%), Query Frame = -1 Query: 5 VVSIGITIYLITFLVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFL----NSLSARNDYRY 592 ++SI ITI+L+ LV + GL SSE+GM AT FC+TGLL+TRW+YSRHFPLSDLYE IH + F+N++N LSAITAPSA FTQGFATSG LT+MHQS ILVPALQ QWLMMHVSMM+LGY LVITFRK + + K +F + GSF F EI+Y NEK+ + + S RN +RY Sbjct: 17 IISIVITIHLLNLLVHDTVGLCDSSEKGMMATFFCITGLLVTRWIYSRHFPLSDLYESLMFLSWSFSIIHMVPYFRNHKNSLSAITAPSAIFTQGFATSGLLTEMHQSAILVPALQSQWLMMHVSMMLLGYASLLCGSLLSVALLVITFRKTLGIPGKNNHF--LIGSFPFGEIRYFNEKRKRSVLKKTSFFSFRNYHRY 214
BLAST of CK937722 vs. ExPASy Swiss-Prot
Match: CCSA_NANDO (Cytochrome c biogenesis protein ccsA OS=Nandina domestica GN=ccsA PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 7.338e-50 Identity = 110/198 (55.56%), Postives = 130/198 (65.66%), Query Frame = -1 Query: 5 VVSIGITIYLITFLVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNDYRY 592 +VSI ITIYL+T LV E GLY SSE+G+ AT FC+TG L+ RW+YS HFPLSDLYE IH + F N++N LS ITAPSA FTQGFATSG LT+MH+S LVPALQ QWLMMHVSMM+L Y LVITFRK + F K K+ + G F F EI+Y+NE NV N+ +S RN RY Sbjct: 17 IVSIVITIYLMTLLVHETVGLYDSSEKGLIATFFCITGFLVIRWIYSGHFPLSDLYESLMFLSWSFSIIHMVPYFTNHKNLLSTITAPSAIFTQGFATSGLLTEMHRSTKLVPALQSQWLMMHVSMMILSYAALLCGSLLSIALLVITFRKNVENFGKSKSNPFLIGPFSFGEIKYVNEINNVLRNTFLISFRNFRRY 214
BLAST of CK937722 vs. ExPASy Swiss-Prot
Match: CCSA_PANGI (Cytochrome c biogenesis protein ccsA OS=Panax ginseng GN=ccsA PE=3 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 1.635e-49 Identity = 110/196 (56.12%), Postives = 129/196 (65.82%), Query Frame = -1 Query: 8 VVSIGITIYLITFLVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS-LSARNDYR 592 +VSI ITI+LIT LVDEI LY SSE+GM A C+TGLL+TRW+YSRHFPLSDLYE IH + FK + +LS ITA S FTQGFATSG LT++HQS ILVPALQ +WL+MHVSMM+L Y LVITFRK +F KR +N F F EIQYMNE+ NV + SA+N YR Sbjct: 17 IVSIVITIHLITLLVDEIIKLYDSSEKGMIAIFLCITGLLVTRWIYSRHFPLSDLYESLIFLSWSLSVIHIVPYFKKKKKNLSTITASSVIFTQGFATSGLLTEIHQSAILVPALQSEWLIMHVSMMILSYAALLCGSLLSVALLVITFRKNRNIFCKRNPL--LNELFSFGEIQYMNERNNVLRTTFFSAKNYYR 210
BLAST of CK937722 vs. ExPASy Swiss-Prot
Match: CCSA_OENEH (Cytochrome c biogenesis protein ccsA OS=Oenothera elata subsp. hookeri GN=ccsA PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 6.212e-49 Identity = 107/197 (54.31%), Postives = 130/197 (65.99%), Query Frame = -1 Query: 8 VVSIGITIYLITFLVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNDYR 592 +VSIGITI+LIT VDEI GLY SSE+G+ T C+TGLL+TRW YS HFPLS+LYE IH FK ++++ IT+ S FTQG TSG L++M QS ILVPALQ QWLMMHVSMMVLGY LVITFRK +R+F K+K F + SF F EIQY NE NV L++ +S++N YR Sbjct: 17 LVSIGITIFLITLSVDEIIGLYDSSEKGVIGTFLCITGLLVTRWAYSGHFPLSNLYESLLFLSWSFAIIHMFPYFKKQKSYVRTITSSSTIFTQGLVTSGLLSEMQQSEILVPALQSQWLMMHVSMMVLGYAALLCGSLLSVALLVITFRKALRIFSKKKAF--LKDSFSFVEIQYRNEPSNVLLSTSFISSKNYYR 211
BLAST of CK937722 vs. ExPASy Swiss-Prot
Match: CCSA_OENBI (Cytochrome c biogenesis protein ccsA OS=Oenothera biennis GN=ccsA PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 6.212e-49 Identity = 107/197 (54.31%), Postives = 130/197 (65.99%), Query Frame = -1 Query: 8 VVSIGITIYLITFLVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNDYR 592 +VSIGITI+LIT VDEI GLY SSE+G+ T C+TGLL+TRW YS HFPLS+LYE IH FK ++++ IT+ S FTQG TSG L++M QS ILVPALQ QWLMMHVSMMVLGY LVITFRK +R+F K+K F + SF F EIQY NE NV L++ +S++N YR Sbjct: 17 LVSIGITIFLITLSVDEIIGLYDSSEKGVIGTFLCITGLLVTRWAYSGHFPLSNLYESLLFLSWSFAIIHMFPYFKKQKSYVRTITSSSTIFTQGLVTSGLLSEMQQSEILVPALQSQWLMMHVSMMVLGYAALLCGSLLSVALLVITFRKALRIFSKKKAF--LKDSFSFVEIQYRNEPSNVLLSTSFISSKNYYR 211 The following BLAST results are available for this feature:
BLAST of CK937722 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937722 ID=CK937722; Name=CK937722; organism=Citrus sinensis; type=EST; length=622bpback to top |