CK937707

Overview
NameCK937707
Unique NameCK937707
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length821
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937707 vs. ExPASy Swiss-Prot
Match: HCAD_ECO24 (3-phenylpropionate/cinnamic acid dioxygenase ferredoxin--NAD(+) reductase component OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=hcaD PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.818e-13
Identity = 74/261 (28.35%), Postives = 114/261 (43.68%), Query Frame = 1
Query:   25 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLP-EWYKEKGIELILSTEIVKADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEXXXXXXXXXXXXXXXXYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVG 804
            M EK+   +I+GGG +A  AA    +QG   GEL + S E   PYERP LSK+ L  E + +L           +++LP  W++E  + L     I      ++ L+   G  + +  L IATG+    L      G   +  F LR   DA +L E                 IGLEL+A+       V+++      M R     +  +    +   G++I+            DGE  E+ L+ G TL+AD+V+ G+G
Sbjct:    1 MKEKTI--IIVGGGQAAAMAAASLRQQGFT-GELHLFSDERHLPYERPPLSKSMLL-EDSPQL-----------QQVLPANWWQENNVHLHSGVTIKTLGRDTRELVLTNGESWHWDQLFIATGAAARPLPLLDALG---ERCFTLRHAGDAARLREVLQPERSVVIVGAGT--IGLELAASATQRRCKVTVIELAATVMGRNAPLPVQRYLLQRHQQAGVRILLNN---AIEHVVDGEKVELTLQSGETLQADVVIYGIG 238          
BLAST of CK937707 vs. ExPASy Swiss-Prot
Match: HCAD_ECOSM (3-phenylpropionate/cinnamic acid dioxygenase ferredoxin--NAD(+) reductase component OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=hcaD PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.101e-13
Identity = 75/261 (28.74%), Postives = 113/261 (43.30%), Query Frame = 1
Query:   25 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLP-EWYKEKGIELILSTEIVKADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEXXXXXXXXXXXXXXXXYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVG 804
            M EK+   +I+GGG +A  AA    +QG   GEL + S E   PYERP LSK+ L  E + +L           + +LP  W++E  + L     I      ++ L+ A G  + +  L IATG+    L      G   +  F LR   DA +L E                 IGLEL+A+       V+++      M R     +  +    +   G++I+            DGE  E+ L+ G TL AD+V+ G+G
Sbjct:    1 MKEKTI--IIVGGGQAAAMAAASLRQQGFT-GELHLFSDEQHLPYERPPLSKSMLL-EDSPQL-----------QSVLPAHWWQENNVHLHSGVTIKTLGRDTRELVLANGESWHWDQLFIATGAAARPLPLLDALG---ERCFTLRHAGDAARLREVLQPERSVVIVGAGT--IGLELAASATQRGCKVTVIELAATVMGRNAPPPVQHYLLQRHQQAGVRILLNN---AIEHVVDGENVELTLQSGETLRADVVIYGIG 238          
BLAST of CK937707 vs. ExPASy Swiss-Prot
Match: THCD_RHOER (Rhodocoxin reductase OS=Rhodococcus erythropolis GN=thcD PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 5.289e-13
Identity = 68/261 (26.05%), Postives = 109/261 (41.76%), Query Frame = 1
Query:   49 VILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFP----EGTARLPGFHVCVGSGGERLLPEWYKEKGIELILSTEIVKADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEXXXXXXXXXXXXXXXXYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLI 819
            VI+G G +   AA      G   G + ++  E   PY+RP LSKAYL      E  A  P               +++ +  I L     +V+ D  ++ +        +Y  L++ATG+   R     V GA+   + YLR   +A+ L                  +IGLE++AA +   +DV++V      M R  ++ ++ ++   +   G+ +   T  V     ADG    V    G  + AD VVVG+G  P I
Sbjct:    4 VIIGSGQAGFEAAVSLRSHGFS-GTITLVGDEPGVPYQRPPLSKAYLHSDPDRESLALRPA--------------QYFDDHRITLTCGKPVVRIDRDAQRVELIDATAIEYDHLILATGA---RNRLLPVPGANLPGVHYLRTAGEAESLTS--SMASCSSLVVIGAGFIGLEVAAAARKKGLDVTVVEAMDRPMARALSSVMSGYFSTAHTEHGVHMRLST-GVKTINAADGRAAGVTTNSGDVIHADAVVVGIGVVPNI 243          
BLAST of CK937707 vs. ExPASy Swiss-Prot
Match: HCAD_SHISS (3-phenylpropionate/cinnamic acid dioxygenase ferredoxin--NAD(+) reductase component OS=Shigella sonnei (strain Ss046) GN=hcaD PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.021e-13
Identity = 73/261 (27.97%), Postives = 113/261 (43.30%), Query Frame = 1
Query:   25 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLP-EWYKEKGIELILSTEIVKADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEXXXXXXXXXXXXXXXXYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVG 804
            M EK+   +I+GGG +A  AA    +QG   GEL + S E   PYERP LSK+ L  E + +L           +++LP  W++E  + L     I      ++ L+   G  + +  L IA G+    L      G   +  F LR   DA +L E                 IGLEL+A+       V+++      M R     +  +    +   G++I+            DGE  E+ L+ G TL+AD+V+ G+G
Sbjct:    1 MKEKTI--IIVGGGQAAAMAAASLRQQGFT-GELHLFSDERHLPYERPPLSKSMLL-EDSPQL-----------QQVLPANWWQENNVHLHSGVTIKTLGRDTRELVLTNGESWHWDQLFIAIGAAARPLPLLDALG---ERCFTLRHAGDAARLREVLQPERSVVIVGAGT--IGLELAASATQRRCKVTVIELAATVMGRNAPPPVQRYLLQRHQQAGVRILLNN---AIEHVVDGEKVELTLQSGETLQADVVIYGIG 238          
BLAST of CK937707 vs. ExPASy Swiss-Prot
Match: HCAD_ECO7I (3-phenylpropionate/cinnamic acid dioxygenase ferredoxin--NAD(+) reductase component OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=hcaD PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.010e-12
Identity = 73/261 (27.97%), Postives = 111/261 (42.53%), Query Frame = 1
Query:   25 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLP-EWYKEKGIELILSTEIVKADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEXXXXXXXXXXXXXXXXYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVG 804
            M EK+   +I+GGG +A  AA    +QG   GEL + S E   PYERP LSK+ L  E + +L           + +LP  W++E  + L     I      ++ L+   G  + +  L IATG+    L      G   +  F LR   DA +L E                 IGLEL+A+        +++      M R     +  +    +   G++I+            DGE  E+ L+ G TL AD+V+ G+G
Sbjct:    1 MKEKTI--IIVGGGQAAAMAAASLRQQGFT-GELHLFSDEQHLPYERPPLSKSMLL-EDSPQL-----------QSVLPAHWWQENNVHLHSGVTIKTLGRDTRELVLTNGESWHWDQLFIATGAAARPLPLLDALG---ERCFTLRHAGDAARLREVLQPERSVVIVGAGT--IGLELAASATQRGCKATVIELAATVMGRNAPPPVQRYLLQRHQQAGVRILLNN---AIEHVVDGENVELTLQSGETLRADVVIYGIG 238          
BLAST of CK937707 vs. ExPASy Swiss-Prot
Match: NASB_BACSU (Assimilatory nitrate reductase electron transfer subunit OS=Bacillus subtilis GN=nasB PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.428e-12
Identity = 65/264 (24.62%), Postives = 110/264 (41.67%), Query Frame = 1
Query:   34 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEKGIELILSTEIVKADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEXXXXXXXXXXXXXXXXYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKII--KGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLI 819
            K  + V+ G G++      E  K      E+ I   E    Y R  LS      +G A L    + + S       +WY + GI L     +++ D   + +++       Y  L++ATGS+   L    + GAD K ++  R I+D   L+                  +GLE +  L+   +DVS+++     M +      A   +     KG+  +  K TV++   T AD     +  KDG +L+AD++V+  G +P I
Sbjct:    2 KKQRLVLAGNGMAGIRCIEEVLKLNRHMFEIVIFGSEPHPNYNRILLSSVL---QGEASLDD--ITLNS------KDWYDKHGITLYTGETVIQIDTDQQQVITDRKRTLSYDKLIVATGSSPHILP---IPGADKKGVYGFRTIEDCQALMNMAQHFQKAAVIGAGL--LGLEAAVGLQHLGMDVSVIHHSAGIMQKQLDQTAARLLQTELEQKGLTFLLEKDTVSISGATKAD----RIHFKDGSSLKADLIVMAAGVKPNI 245          
BLAST of CK937707 vs. ExPASy Swiss-Prot
Match: BPHG_BURXL (Biphenyl dioxygenase system ferredoxin--NAD(+) reductase component OS=Burkholderia xenovorans (strain LB400) GN=bphG PE=3 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.701e-11
Identity = 60/257 (23.35%), Postives = 108/257 (42.02%), Query Frame = 1
Query:   52 ILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLF---PEGTARLPGFHVCVGSGGERLLPEWYKEKGIELILSTEIVKADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEXXXXXXXXXXXXXXXXYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRP 813
            I+G G++   AAR    QG + G + ++  E+   Y+R  LSK  L    PE  A L                 WY    +++ L   +   D+A++ +   +G    Y  L++ATG+   R+    + G D   I  LR++ D+  L +                 IG E++   +  ++ V+++      + R+      A+        G+++ +   A  F     G+V+ V   DGR + AD+V+V +G  P
Sbjct:    7 IIGAGLAGSTAARALRAQGYE-GRIHLLGDESHQAYDRTTLSKTVLAGEQPEPPAILDS--------------AWYASAHVDVQLGRRVSCLDLANRQIQFESGAPLAYDRLLLATGARARRMA---IRGGDLAGIHTLRDLADSQALRQALQPGQSLVIVGGGL--IGCEVATTARKLSVHVTILEAGDELLVRVLGHRTGAWCRAELERMGVRVERNAQAARF--EGQGQVRAVICADGRRVPADVVLVSIGAEP 241          
BLAST of CK937707 vs. ExPASy Swiss-Prot
Match: NIR_EMENI (Nitrite reductase [NAD(P)H] OS=Emericella nidulans GN=niiA PE=3 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 3.790e-11
Identity = 49/189 (25.93%), Postives = 83/189 (43.92%), Query Frame = 1
Query:  262 EWY---KEKGIELILSTEIVKADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEXXXXXXXXXXXXXXXXYIGLELSAAL-KINNI-DVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRP 813
            EWY   K++  +  L+T +       KT+ ++TG I  Y ILV+ATGS  +  T     G DAK IF  R I D ++L+E                 +GLE + A+  + +   V ++    W + R    D  +       + G++++         T+ D  V  +  +DG+ L+   +   +G RP
Sbjct:  108 EWYGSFKDRSFDYYLNTRVTDVFPQHKTVKTSTGDIVSYDILVLATGSDAVLPT--STPGHDAKGIFVYRTISDLERLMEFAANHKGQTGVTVGGGLLGLEAAKAMTDLEDFGSVKLIDRNKWVLARQLDGDAGSLVTKKIRDLGLEVLHEKRVAKIHTDDDNNVTGILFEDGQELDCCCICFAIGIRP 294          
BLAST of CK937707 vs. ExPASy Swiss-Prot
Match: NAOX_METJA (Putative NADH oxidase OS=Methanocaldococcus jannaschii GN=MJ0649 PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 6.465e-11
Identity = 66/264 (25.00%), Postives = 115/264 (43.56%), Query Frame = 1
Query:   49 VILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLL--PEWYK-EKGIELILSTEIVKADIASKTL--LSATGLIFK--YQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEXXXXXXXXXXXXXXXXYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLI 819
            +I+G G +AG       ++  K  E+ +I+KE    Y   A+       EG  +         S  + ++  PE YK E+ I+++  T ++  D  +  +  +   G  F+  Y  LV+ATG+         +EG D   +F +R I+D   +++                 IGLE++  LK   +DV +V   P  +PR    D+A   + Y   +GIK++   ++         E  E    DG+  + D+V++  G RP I
Sbjct:    4 IIIGSG-AAGLTTASTIRKYNKDMEIVVITKEKEIAYSPCAIPYVI---EGAIK---------SFDDIIMHTPEDYKRERNIDILTETTVIDVDSKNNKIKCVDKDGNEFEMNYDYLVLATGAEPFIPP---IEGKDLDGVFKVRTIEDGRAILKYIEENGCKKVAVVGAGAIGLEMAYGLKCRGLDVLVVEMAPQVLPRFLDPDMAEIVQKYLEKEGIKVM---LSKPLEKIVGKEKVEAVYVDGKLYDVDMVIMATGVRPNI 248          
BLAST of CK937707 vs. ExPASy Swiss-Prot
Match: AIFM1_RAT (Apoptosis-inducing factor 1, mitochondrial OS=Rattus norvegicus GN=Aifm1 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.444e-11
Identity = 68/275 (24.73%), Postives = 120/275 (43.64%), Query Frame = 1
Query:   46 YVILGGGVSAGYAAREFAKQGVKPG-ELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLL----PEWY---------KEKGIELILSTEIVKADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYL-REIDDADKLVEXXXXXXXXXXXXXXXXYIGLELSAAL----KINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRP 813
            ++++GGG +A  AAR    +   PG  + I+S++   PY RP LSK   F +             +G ER +    P +Y         +  G+ ++   ++V  D+    +    G    ++  +IATG T   L+     GA+ K+   L R+I D   L +                ++G EL+ AL    + + I+V  ++PE   M ++    ++ +       +G+K++    A+  +    G    +KLKDGR +E D +V  VG  P
Sbjct:  133 FLLIGGGTAAFAAARSIRARD--PGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLQFRQWNGKERSIYFQPPSFYVSAQDLPHIENGGVAVLTGKKVVHLDVRGNMVKLNDGSQITFEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIGDFRALEK--ISREVKSITVIGGGFLGSELACALGRKSQASGIEVIQLFPEKGNMGKILPEYLSNWTMEKVKREGVKVMPN--AIVQSVGVSGGKLLIKLKDGRKVETDHIVTAVGLEP 401          
The following BLAST results are available for this feature:
BLAST of CK937707 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
HCAD_ECO241.818e-1328.353-phenylpropionate/cinnamic acid dioxygenase ferre... [more]
HCAD_ECOSM3.101e-1328.743-phenylpropionate/cinnamic acid dioxygenase ferre... [more]
THCD_RHOER5.289e-1326.05Rhodocoxin reductase OS=Rhodococcus erythropolis G... [more]
HCAD_SHISS9.021e-1327.973-phenylpropionate/cinnamic acid dioxygenase ferre... [more]
HCAD_ECO7I2.010e-1227.973-phenylpropionate/cinnamic acid dioxygenase ferre... [more]
NASB_BACSU3.428e-1224.62Assimilatory nitrate reductase electron transfer s... [more]
BPHG_BURXL1.701e-1123.35Biphenyl dioxygenase system ferredoxin--NAD(+) red... [more]
NIR_EMENI3.790e-1125.93Nitrite reductase [NAD(P)H] OS=Emericella nidulans... [more]
NAOX_METJA6.465e-1125.00Putative NADH oxidase OS=Methanocaldococcus jannas... [more]
AIFM1_RAT8.444e-1124.73Apoptosis-inducing factor 1, mitochondrial OS=Ratt... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004482_H02 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0001_IVF_H02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937707 ID=CK937707; Name=CK937707; organism=Citrus sinensis; type=EST; length=821bp
GGGGAACTTTTTTTCGATCGATCAATGGCGGAGAAGAGCTTCAAGTACGT
GATCCTCGGTGGCGGTGTCTCTGCTGGATATGCAGCTAGGGAGTTTGCTA
AGCAGGGTGTTAAGCCAGGCGAGCTGGCAATTATCTCCAAAGAAGCAGTT
GCTCCGTATGAGCGTCCAGCACTTAGCAAGGCATATCTTTTCCCTGAGGG
AACTGCTAGACTTCCCGGTTTCCATGTCTGTGTTGGAAGTGGTGGAGAGA
GACTGCTTCCTGAGTGGTACAAAGAGAAAGGAATTGAATTGATCCTCAGC
ACGGAAATAGTCAAAGCAGATATTGCTTCCAAGACTCTCCTTAGTGCAAC
TGGGCTTATCTTTAAGTACCAGATTTTAGTAATTGCAACTGGTTCTACAG
TTTTACGGTTGACTGATTTTGGTGTTGAAGGTGCTGATGCCAAAAATATC
TTCTACTTAAGAGAAATTGATGATGCTGATAAGCTGGTTGAAGCAATAAA
AGCAAAGAAGAATGGGAAGGCGGTGGTTGTTGGAGGAGGATACATTGGTC
TTGAGCTTAGTGCAGCTTTAAAAATAAATAATATTGATGTTAGCATGGTT
TATCCTGAACCATGGTGCATGCCTCGTCTTTTCACTGCGGATATTGCTGC
TTTCTATGAGGGTTATTATGCCAATAAAGGAATCAAAATTATTAAGGGAA
CAGTTGCTGTTGGATTTACCACAAATGCCGATGGAGAGGTCAAAGAAGTG
AAGCTGAAGGACGGCAGGACTCTGGAAGCTGACATTGTTGTTGTTGGTGT
AGGAGGAAGACCTCTTATATC
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