EY665891

Overview
NameEY665891
Unique NameEY665891
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665891 vs. ExPASy Swiss-Prot
Match: BCCA_MYCBO (Acetyl-/propionyl-coenzyme A carboxylase alpha chain OS=Mycobacterium bovis GN=accA1 PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 9.513e-35
Identity = 71/118 (60.17%), Postives = 91/118 (77.12%), Query Frame = 3
Query:  135 EKILIANRGEIACRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPGYGFLSESADFAQLCGDNGLTFIGPPVSAIRDLGDQSASK 488
            + +L+ANRGEIA R++RT +RLGIR+VAVYSD D D+ HV  AD A+R+GP PAR SYL+   ++DAA RTGAQAIHPGYGFL+E+ADFA  C    + F+GPP  AI  +GD+ A+K
Sbjct:    3 DTVLVANRGEIAVRVIRTLRRLGIRSVAVYSDPDVDARHVLEADAAVRLGPAPARESYLDIGKVLDAAARTGAQAIHPGYGFLAENADFAAACERARVVFLGPPARAIEVMGDKIAAK 120          
BLAST of EY665891 vs. ExPASy Swiss-Prot
Match: PCCA_HUMAN (Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Homo sapiens GN=PCCA PE=1 SV=3)

HSP 1 Score: 142.895 bits (359), Expect = 2.343e-33
Identity = 70/156 (44.87%), Postives = 103/156 (66.03%), Query Frame = 3
Query:   21 LMPFTLRRKPNDTSFTLQSRLFSVSKSGCKSDDKQQRIEKILIANRGEIACRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPGYGFLSESADFAQLCGDNGLTFIGPPVSAIRDLGDQSASK 488
            ++   LR   +   ++ Q  + S +      D  ++  +KIL+ANRGEIACR++RT K++GI+TVA++SD D  S+HVK ADEA+ +GP P   SYLN  +I++A  +T AQA+HPGYGFLSE+ +FA+      + FIGP   AI+ +GD+  SK
Sbjct:    1 MLSAALRTLKHVLYYSRQCLMVSRNLGSVGYDPNEKTFDKILVANRGEIACRVIRTCKKMGIKTVAIHSDVDASSVHVKMADEAVCVGPAPTSKSYLNMDAIMEAIKKTRAQAVHPGYGFLSENKEFARCLAAEDVVFIGPDTHAIQAMGDKIESK 156          
BLAST of EY665891 vs. ExPASy Swiss-Prot
Match: ACCC1_BACSU (Biotin carboxylase 1 OS=Bacillus subtilis GN=accC1 PE=3 SV=3)

HSP 1 Score: 141.739 bits (356), Expect = 5.220e-33
Identity = 69/122 (56.56%), Postives = 91/122 (74.59%), Query Frame = 3
Query:  132 IEKILIANRGEIACRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPGYGFLSESADFAQLCGDNGLTFIGPPVSAIRDLGDQSASKRIM 497
            I+K+LIANRGEIA RI+R  + LGI TVAVYS+AD+D+LHV+ ADEA  IGP  ++ SYLN ++IV  A  TG  AIHPGYGFL+E+ADFA+LC +  +TF+GP   AI  +G +  ++  M
Sbjct:    2 IKKLLIANRGEIAVRIIRACRELGIETVAVYSEADKDALHVQMADEAFCIGPKASKDSYLNVTNIVSVAKLTGTDAIHPGYGFLAENADFAELCEEVNVTFVGPSADAISKMGTKDVARETM 123          
BLAST of EY665891 vs. ExPASy Swiss-Prot
Match: PCCA_CAEBR (Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Caenorhabditis briggsae GN=pcca-1 PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 8.903e-33
Identity = 72/127 (56.69%), Postives = 89/127 (70.08%), Query Frame = 3
Query:  114 DDKQQRIEKILIANRGEIACRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPGYGFLSESADFAQLCGDNGLTFIGPPVSAIRDLGDQSASKRI 494
            D  + + +KILIANRGEIACR+++TAK +GI+TVAV+SD D +SLHVK ADEAI +G  P   SYL    I+ A   TGAQA+HPGYGFLSE+  FA      G  FIGP   AI D+GD+  SK+I
Sbjct:   57 DHNEPKFDKILIANRGEIACRVIKTAKAMGIKTVAVHSDVDSNSLHVKMADEAICVGEAPTAKSYLRVDRILQAVEDTGAQAVHPGYGFLSENTKFAAELEKAGAKFIGPNSKAILDMGDKIHSKKI 183          
BLAST of EY665891 vs. ExPASy Swiss-Prot
Match: PCCA_CAEEL (Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Caenorhabditis elegans GN=pcca-1 PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.983e-32
Identity = 70/127 (55.12%), Postives = 89/127 (70.08%), Query Frame = 3
Query:  114 DDKQQRIEKILIANRGEIACRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPGYGFLSESADFAQLCGDNGLTFIGPPVSAIRDLGDQSASKRI 494
            D  + + +KILIANRGEIACR+++TA+ +GI+TVAV+SD D +SLHVK ADEA+ +G  P   SYL    I+ A   TGAQA+HPGYGFLSE+  FA      G  FIGP   AI D+GD+  SK+I
Sbjct:   43 DYNEPKFDKILIANRGEIACRVIKTARAMGIKTVAVHSDVDSNSLHVKMADEAVCVGEAPTAKSYLRADRILQAVEDTGAQAVHPGYGFLSENTKFAAELEKAGAKFIGPNSKAILDMGDKIHSKKI 169          
BLAST of EY665891 vs. ExPASy Swiss-Prot
Match: ACCC_ANASP (Biotin carboxylase OS=Anabaena sp. (strain PCC 7120) GN=accC PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.591e-32
Identity = 68/123 (55.28%), Postives = 91/123 (73.98%), Query Frame = 3
Query:  129 RIEKILIANRGEIACRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPGYGFLSESADFAQLCGDNGLTFIGPPVSAIRDLGDQSASKRIM 497
            + +KILIANRGEIA RI+R  + +GI T+AV+S  DR++LHV+ ADEA+ IG P +  SYLN  +I+ AA+   A AIHPGYGFLSE+A FA++C D+ + FIGP   AIR +GD+S +K  M
Sbjct:    2 KFDKILIANRGEIALRILRACEEMGIATIAVHSTVDRNALHVQLADEAVCIGEPASAKSYLNIPNIIAAALTRNASAIHPGYGFLSENAKFAEICADHHIAFIGPTPEAIRLMGDKSTAKETM 124          
BLAST of EY665891 vs. ExPASy Swiss-Prot
Match: ACCC_HAEIN (Biotin carboxylase OS=Haemophilus influenzae GN=accC PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.771e-32
Identity = 72/122 (59.02%), Postives = 89/122 (72.95%), Query Frame = 3
Query:  132 IEKILIANRGEIACRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPGYGFLSESADFAQLCGDNGLTFIGPPVSAIRDLGDQSASKRIM 497
            +EK++IANRGEIA RI+R  K LGI+TVAV+S ADRD  HV  ADE I IGP P+  SYLN  +I+ AA  TGA AIHPGYGFLSE+ADFA+    +G TFIGP    IR +GD+ ++ + M
Sbjct:    2 LEKVVIANRGEIALRILRACKELGIKTVAVHSTADRDLKHVLLADETICIGPAPSAKSYLNIPAIIAAAEVTGADAIHPGYGFLSENADFAEQVERSGFTFIGPTADVIRLMGDKVSAIKAM 123          
BLAST of EY665891 vs. ExPASy Swiss-Prot
Match: ACCC_PSEAE (Biotin carboxylase OS=Pseudomonas aeruginosa GN=accC PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 9.844e-32
Identity = 69/122 (56.56%), Postives = 90/122 (73.77%), Query Frame = 3
Query:  132 IEKILIANRGEIACRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPGYGFLSESADFAQLCGDNGLTFIGPPVSAIRDLGDQSASKRIM 497
            +EK+LIANRGEIA RI+R  K LGI+TVAV+S ADR+ +H+  ADE++ IGP PA  SYL   +I+ AA  TGA AIHPGYGFL+E+ADFA+    +G TF+GP    IR +GD+ ++K  M
Sbjct:    2 LEKVLIANRGEIALRILRACKELGIKTVAVHSTADRELMHLSLADESVCIGPAPATQSYLQIPAIIAAAEVTGATAIHPGYGFLAENADFAEQIERSGFTFVGPTAEVIRLMGDKVSAKDAM 123          
BLAST of EY665891 vs. ExPASy Swiss-Prot
Match: ACCC_BACHD (Biotin carboxylase OS=Bacillus halodurans GN=accC PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.381e-31
Identity = 67/121 (55.37%), Postives = 87/121 (71.90%), Query Frame = 3
Query:  135 EKILIANRGEIACRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPGYGFLSESADFAQLCGDNGLTFIGPPVSAIRDLGDQSASKRIM 497
            +K+LIANRGEIA RI+RT ++L IRTVA+YS+AD DSLHVK ADEA  IG PP   SYL   +I++ A + G  AIHPGYG LSE+A FA+ C + G++FIGP    I  +G + A++  M
Sbjct:    3 KKVLIANRGEIAVRIIRTCQKLNIRTVAIYSEADVDSLHVKHADEAFLIGKPPVAESYLKVDTILEVAKQAGVDAIHPGYGLLSENARFARACVEAGISFIGPSPEVIERMGSKIAARTAM 123          
BLAST of EY665891 vs. ExPASy Swiss-Prot
Match: ACCC_ECOLI (Biotin carboxylase OS=Escherichia coli (strain K12) GN=accC PE=1 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 7.055e-30
Identity = 68/115 (59.13%), Postives = 84/115 (73.04%), Query Frame = 3
Query:  132 IEKILIANRGEIACRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPGYGFLSESADFAQLCGDNGLTFIGPPVSAIRDLGDQ 476
            ++KI+IANRGEIA RI+R  K LGI+TVAV+S ADRD  HV  ADE + IGP P+  SYLN  +I+ AA  TGA AIHPGYGFLSE+A+FA+    +G  FIGP    IR +GD+
Sbjct:    2 LDKIVIANRGEIALRILRACKELGIKTVAVHSSADRDLKHVLLADETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIFIGPKAETIRLMGDK 116          
The following BLAST results are available for this feature:
BLAST of EY665891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
BCCA_MYCBO9.513e-3560.17Acetyl-/propionyl-coenzyme A carboxylase alpha cha... [more]
PCCA_HUMAN2.343e-3344.87Propionyl-CoA carboxylase alpha chain, mitochondri... [more]
ACCC1_BACSU5.220e-3356.56Biotin carboxylase 1 OS=Bacillus subtilis GN=accC1... [more]
PCCA_CAEBR8.903e-3356.69Propionyl-CoA carboxylase alpha chain, mitochondri... [more]
PCCA_CAEEL1.983e-3255.12Propionyl-CoA carboxylase alpha chain, mitochondri... [more]
ACCC_ANASP2.591e-3255.28Biotin carboxylase OS=Anabaena sp. (strain PCC 712... [more]
ACCC_HAEIN5.771e-3259.02Biotin carboxylase OS=Haemophilus influenzae GN=ac... [more]
ACCC_PSEAE9.844e-3256.56Biotin carboxylase OS=Pseudomonas aeruginosa GN=ac... [more]
ACCC_BACHD6.381e-3155.37Biotin carboxylase OS=Bacillus halodurans GN=accC ... [more]
ACCC_ECOLI7.055e-3059.13Biotin carboxylase OS=Escherichia coli (strain K12... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-006-H05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665891 ID=EY665891; Name=EY665891; organism=Citrus sinensis; type=EST; length=890bp
CCCGCGTCCGGACAATGTCGTTAATGCCCTTTACTCTCCGTCGAAAACCA
AACGACACGTCGTTTACTCTTCAATCACGACTATTCAGCGTATCGAAATC
TGGTTGCAAATCCGATGATAAGCAACAGCGGATAGAGAAGATTTTAATAG
CCAACAGAGGAGAGATTGCTTGCAGAATTATGAGAACCGCTAAGCGATTG
GGGATTCGAACCGTAGCCGTATACAGCGACGCCGACAGAGACTCGCTTCA
CGTGAAATCCGCTGACGAAGCTATTCGCATCGGCCCACCTCCGGCTCGGT
TGAGTTATCTTAATGGCTCGTCCATTGTTGACGCCGCGATTCGAACTGGT
GCTCAGGCTATCCACCCTGGTTATGGTTTCTTATCTGAAAGTGCGGATTT
TGCTCAACTTTGTGGAGATAATGGTCTTACCTTTATTGGCCCTCCAGTGT
CTGCTATCCGGGACCTGGGCGACCAGAGTGCATCAAAGAGAATAATGGGT
GCCGCAGGGGTTCCACTTGTTCCTGGGCACCCTGGCCATGGAACAACATA
TTGATCTAATGAAATCAAAAGCACCTAACATTGGGGATCCCATATTTAAT
AAAGCCAAATTCCTGCGTGGGGGGAGGAAAAGGGGAGGACATTTGCGCAA
CATTCCAATGACTTTTGTTGACCTCCTTTCTTGGGACCCACCACCGCGGG
CTTCCGGCTTTTCTTTTGGGACACACCACCATTCTTGTTATACAAACTTT
TTTTAACCCCGACCCCAGCCCCGCCATAAGTCCCCGACTCTCTGGCGGAC
CATTTCTCGCAGGGCGCGTGTGATCTCCGGCTCCCAGAACAACTCCCCTG
CTCACTAAAAAGACTCTACGCCAACTCAACATACTGCAAC
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