EY665891

Overview
NameEY665891
Unique NameEY665891
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665891 vs. ExPASy Swiss-Prot
Match: ACCC_ECO57 (Biotin carboxylase OS=Escherichia coli O157:H7 GN=accC PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 7.055e-30
Identity = 68/115 (59.13%), Postives = 84/115 (73.04%), Query Frame = 3
Query:  132 IEKILIANRGEIACRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPGYGFLSESADFAQLCGDNGLTFIGPPVSAIRDLGDQ 476
            ++KI+IANRGEIA RI+R  K LGI+TVAV+S ADRD  HV  ADE + IGP P+  SYLN  +I+ AA  TGA AIHPGYGFLSE+A+FA+    +G  FIGP    IR +GD+
Sbjct:    2 LDKIVIANRGEIALRILRACKELGIKTVAVHSSADRDLKHVLLADETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIFIGPKAETIRLMGDK 116          
BLAST of EY665891 vs. ExPASy Swiss-Prot
Match: DUR1_YEAST (Urea amidolyase OS=Saccharomyces cerevisiae GN=DUR1,2 PE=1 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 7.800e-29
Identity = 65/129 (50.39%), Postives = 91/129 (70.54%), Query Frame = 3
Query:  108 KSDDKQQRIEKILIANRGEIACRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPGYGFLSESADFAQLCGDNGLTFIGPPVSAIRDLGDQSASKRI 494
            K   K++  + +LIANRGEIA RI++T K+LGIR+VAVYSD D+ S HV  AD ++ +    A  +YL+ + I+DAA +T AQAI PGYGFLSE+ADF+  C   G+TF+GP    IR LG + ++++I
Sbjct:  625 KESQKKKLFDTVLIANRGEIAVRIIKTLKKLGIRSVAVYSDPDKYSQHVTDADVSVPLHGTTAAQTYLDMNKIIDAAKQTNAQAIIPGYGFLSENADFSDACTSAGITFVGPSGDIIRGLGLKHSARQI 753          
BLAST of EY665891 vs. ExPASy Swiss-Prot
Match: BCCA_MYCLE (Acetyl-/propionyl-coenzyme A carboxylase alpha chain OS=Mycobacterium leprae GN=bccA PE=3 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 2.269e-28
Identity = 63/122 (51.64%), Postives = 88/122 (72.13%), Query Frame = 3
Query:  129 RIEKILIANRGEIACRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPGYGFLSESADFAQLCGDNGLTFIGPPVSAIRDLGDQSASKRI 494
            RI K+L+ANRGEIA R++R A+   + +VAVY++ D ++ HV+ ADEA  +G   +  SYL+   I+DAA ++GA AIHPGYGFL+E+ADFAQ   D GL +IGP   +IRDLGD+  ++ I
Sbjct:    8 RIAKVLVANRGEIAVRVIRAARDARLPSVAVYAEPDAEAPHVRLADEAFALGGHTSAESYLDFGKILDAAAKSGANAIHPGYGFLAENADFAQAVIDAGLIWIGPSPQSIRDLGDKVTARHI 129          
BLAST of EY665891 vs. ExPASy Swiss-Prot
Match: PYCA_METJA (Pyruvate carboxylase subunit A OS=Methanocaldococcus jannaschii GN=pycA PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.964e-28
Identity = 66/120 (55.00%), Postives = 83/120 (69.17%), Query Frame = 3
Query:  138 KILIANRGEIACRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPGYGFLSESADFAQLCGDNGLTFIGPPVSAIRDLGDQSASKRIM 497
            K+LIANRGEIA RI+R    LGI+TVAVYS+AD+ SLH   ADEA  IGP PA  SYLN  +I++ A +    AIHPGYGFL+E+A+FA+     G  FIGP   AI  +G +  +K+IM
Sbjct:    4 KVLIANRGEIAIRIIRACWELGIKTVAVYSEADKRSLHATLADEAYCIGPAPAAKSYLNIDAILNVAEKAKVDAIHPGYGFLAENAEFARAVKKAGFEFIGPNPDAIEAMGSKINAKKIM 123          
BLAST of EY665891 vs. ExPASy Swiss-Prot
Match: PYCA_ARCFU (Pyruvate carboxylase subunit A OS=Archaeoglobus fulgidus GN=pycA PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.624e-28
Identity = 62/120 (51.67%), Postives = 81/120 (67.50%), Query Frame = 3
Query:  138 KILIANRGEIACRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPGYGFLSESADFAQLCGDNGLTFIGPPVSAIRDLGDQSASKRIM 497
            KIL+ANRGEIA R+MR  + LGI+TV VYS AD+ + H   ADE   IG    R SYLN   I++ A ++GA+AIHPGYGFL+E+A+FA+ C + G+ FIGP    IR  G +  S+  M
Sbjct:    4 KILVANRGEIAVRVMRACRELGIKTVGVYSSADKRAFHRVYADECYYIGKADPRDSYLNIDRIIEVAKKSGAEAIHPGYGFLAENAEFAERCEEEGIVFIGPSPEVIRIAGSKVRSRESM 123          
BLAST of EY665891 vs. ExPASy Swiss-Prot
Match: PYCA_METTH (Pyruvate carboxylase subunit A OS=Methanobacterium thermoautotrophicum GN=pycA PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.509e-27
Identity = 60/120 (50.00%), Postives = 82/120 (68.33%), Query Frame = 3
Query:  138 KILIANRGEIACRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPGYGFLSESADFAQLCGDNGLTFIGPPVSAIRDLGDQSASKRIM 497
            KIL+ANRGEIA R+MR  + LGI++VAVYS+AD+++L  + ADEA  IG P    SYL    I++ A + GA+AIHPGYGFL+E+    + C   G+  IGP  S I  +GD+  SK++M
Sbjct:    4 KILVANRGEIAIRVMRACRELGIKSVAVYSEADKNALFTRYADEAYEIGKPAPSQSYLRIDRILEVAEKAGAEAIHPGYGFLAENPRLGEECEKQGIKLIGPKGSVIEAMGDKITSKKLM 123          
BLAST of EY665891 vs. ExPASy Swiss-Prot
Match: PYC_RAT (Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus GN=Pc PE=1 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 2.124e-26
Identity = 61/122 (50.00%), Postives = 80/122 (65.57%), Query Frame = 3
Query:  132 IEKILIANRGEIACRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARL-SYLNGSSIVDAAIRTGAQAIHPGYGFLSESADFAQLCGDNGLTFIGPPVSAIRDLGDQSASKRI 494
            I+K+++ANRGEIA R+ R    LGIRTVAVYS+ D   +H + ADEA  IG   A + +YL+   I+  A   G  A+HPGYGFLSE ADFAQ C D G+ FIGP    +R +GD+  ++ I
Sbjct:   37 IKKVMVANRGEIAIRVFRACTELGIRTVAVYSEQDTGQMHRQKADEAYLIGRGLAPVQAYLHIPDIIKVAKENGVDAVHPGYGFLSERADFAQACQDAGVRFIGPSPEVVRKMGDKVEARAI 158          
BLAST of EY665891 vs. ExPASy Swiss-Prot
Match: PYC_MOUSE (Pyruvate carboxylase, mitochondrial OS=Mus musculus GN=Pc PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.124e-26
Identity = 61/122 (50.00%), Postives = 80/122 (65.57%), Query Frame = 3
Query:  132 IEKILIANRGEIACRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARL-SYLNGSSIVDAAIRTGAQAIHPGYGFLSESADFAQLCGDNGLTFIGPPVSAIRDLGDQSASKRI 494
            I+K+++ANRGEIA R+ R    LGIRTVAVYS+ D   +H + ADEA  IG   A + +YL+   I+  A   G  A+HPGYGFLSE ADFAQ C D G+ FIGP    +R +GD+  ++ I
Sbjct:   37 IKKVMVANRGEIAIRVFRACTELGIRTVAVYSEQDTGQMHRQKADEAYLIGRGLAPVQAYLHIPDIIKVAKENGVDAVHPGYGFLSERADFAQACQDAGVRFIGPSPEVVRKMGDKVEARAI 158          
BLAST of EY665891 vs. ExPASy Swiss-Prot
Match: ACCC2_BACSU (Biotin carboxylase 2 OS=Bacillus subtilis GN=accC2 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.774e-26
Identity = 61/120 (50.83%), Postives = 79/120 (65.83%), Query Frame = 3
Query:  138 KILIANRGEIACRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPGYGFLSESADFAQLCGDNGLTFIGPPVSAIRDLGDQSASKRIM 497
            K+LIANRGEIA RI+RT  RLGI+TVAVYS+AD+D+ H K+A EA  IG      SYLN   I+  A +  A AIHPGYG LSE++ FA+ C    + FIGP    I  +G +  +++ M
Sbjct:    4 KVLIANRGEIAMRIIRTCSRLGIKTVAVYSEADKDAPHTKAATEAYLIGESRVSESYLNIERIIKTAKKAKADAIHPGYGLLSENSRFAERCKQENIVFIGPSPDIIAKMGSKIEARKAM 123          
BLAST of EY665891 vs. ExPASy Swiss-Prot
Match: PYC_BOVIN (Pyruvate carboxylase, mitochondrial OS=Bos taurus GN=PC PE=2 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 1.054e-25
Identity = 60/122 (49.18%), Postives = 79/122 (64.75%), Query Frame = 3
Query:  132 IEKILIANRGEIACRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARL-SYLNGSSIVDAAIRTGAQAIHPGYGFLSESADFAQLCGDNGLTFIGPPVSAIRDLGDQSASKRI 494
            I+K+++ANRGEIA R+ R    LGIRTVAVYS+ D   +H + ADEA  IG   A + +YL+   I+  A      A+HPGYGFLSE ADFAQ C D G+ FIGP    +R +GD+  ++ I
Sbjct:   37 IKKVMVANRGEIAIRVFRACTELGIRTVAVYSEQDTGQMHRQKADEAYLIGRGLAPVQAYLHIPDIIKVAKENNVDAVHPGYGFLSERADFAQACQDAGVRFIGPSPEVVRKMGDKVEARAI 158          
The following BLAST results are available for this feature:
BLAST of EY665891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
ACCC_ECO577.055e-3059.13Biotin carboxylase OS=Escherichia coli O157:H7 GN=... [more]
DUR1_YEAST7.800e-2950.39Urea amidolyase OS=Saccharomyces cerevisiae GN=DUR... [more]
BCCA_MYCLE2.269e-2851.64Acetyl-/propionyl-coenzyme A carboxylase alpha cha... [more]
PYCA_METJA2.964e-2855.00Pyruvate carboxylase subunit A OS=Methanocaldococc... [more]
PYCA_ARCFU8.624e-2851.67Pyruvate carboxylase subunit A OS=Archaeoglobus fu... [more]
PYCA_METTH2.509e-2750.00Pyruvate carboxylase subunit A OS=Methanobacterium... [more]
PYC_RAT2.124e-2650.00Pyruvate carboxylase, mitochondrial OS=Rattus norv... [more]
PYC_MOUSE2.124e-2650.00Pyruvate carboxylase, mitochondrial OS=Mus musculu... [more]
ACCC2_BACSU2.774e-2650.83Biotin carboxylase 2 OS=Bacillus subtilis GN=accC2... [more]
PYC_BOVIN1.054e-2549.18Pyruvate carboxylase, mitochondrial OS=Bos taurus ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-102-006-H05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665891 ID=EY665891; Name=EY665891; organism=Citrus sinensis; type=EST; length=890bp
CCCGCGTCCGGACAATGTCGTTAATGCCCTTTACTCTCCGTCGAAAACCA
AACGACACGTCGTTTACTCTTCAATCACGACTATTCAGCGTATCGAAATC
TGGTTGCAAATCCGATGATAAGCAACAGCGGATAGAGAAGATTTTAATAG
CCAACAGAGGAGAGATTGCTTGCAGAATTATGAGAACCGCTAAGCGATTG
GGGATTCGAACCGTAGCCGTATACAGCGACGCCGACAGAGACTCGCTTCA
CGTGAAATCCGCTGACGAAGCTATTCGCATCGGCCCACCTCCGGCTCGGT
TGAGTTATCTTAATGGCTCGTCCATTGTTGACGCCGCGATTCGAACTGGT
GCTCAGGCTATCCACCCTGGTTATGGTTTCTTATCTGAAAGTGCGGATTT
TGCTCAACTTTGTGGAGATAATGGTCTTACCTTTATTGGCCCTCCAGTGT
CTGCTATCCGGGACCTGGGCGACCAGAGTGCATCAAAGAGAATAATGGGT
GCCGCAGGGGTTCCACTTGTTCCTGGGCACCCTGGCCATGGAACAACATA
TTGATCTAATGAAATCAAAAGCACCTAACATTGGGGATCCCATATTTAAT
AAAGCCAAATTCCTGCGTGGGGGGAGGAAAAGGGGAGGACATTTGCGCAA
CATTCCAATGACTTTTGTTGACCTCCTTTCTTGGGACCCACCACCGCGGG
CTTCCGGCTTTTCTTTTGGGACACACCACCATTCTTGTTATACAAACTTT
TTTTAACCCCGACCCCAGCCCCGCCATAAGTCCCCGACTCTCTGGCGGAC
CATTTCTCGCAGGGCGCGTGTGATCTCCGGCTCCCAGAACAACTCCCCTG
CTCACTAAAAAGACTCTACGCCAACTCAACATACTGCAAC
back to top