CK937618
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937618 vs. ExPASy Swiss-Prot
Match: RS4Y1_PANPA (40S ribosomal protein S4, Y isoform 1 OS=Pan paniscus GN=RPS4Y1 PE=3 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 6.369e-32 Identity = 66/88 (75.00%), Postives = 72/88 (81.82%), Query Frame = 3
Query: 114 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMD 377
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +D KVR D TYPAGFMD
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPAGFMD 88 HSP 2 Score: 81.2629 bits (199), Expect = 5.417e-15 Identity = 37/58 (63.79%), Postives = 46/58 (79.31%), Query Frame = 1
Query: 511 DVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR 684
DV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCKVR + G KGIP++ T+D R
Sbjct: 88 DVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDAR 145
BLAST of CK937618 vs. ExPASy Swiss-Prot
Match: RS4Y1_HUMAN (40S ribosomal protein S4, Y isoform 1 OS=Homo sapiens GN=RPS4Y1 PE=2 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 6.369e-32 Identity = 66/88 (75.00%), Postives = 72/88 (81.82%), Query Frame = 3
Query: 114 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMD 377
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +D KVR D TYPAGFMD
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPAGFMD 88 HSP 2 Score: 81.2629 bits (199), Expect = 5.417e-15 Identity = 37/58 (63.79%), Postives = 46/58 (79.31%), Query Frame = 1
Query: 511 DVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR 684
DV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCKVR + G KGIP++ T+D R
Sbjct: 88 DVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDAR 145
BLAST of CK937618 vs. ExPASy Swiss-Prot
Match: RS4Y1_GORGO (40S ribosomal protein S4, Y isoform 1 OS=Gorilla gorilla gorilla GN=RPS4Y1 PE=3 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 6.369e-32 Identity = 66/88 (75.00%), Postives = 72/88 (81.82%), Query Frame = 3
Query: 114 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMD 377
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +D KVR D TYPAGFMD
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPAGFMD 88 HSP 2 Score: 81.2629 bits (199), Expect = 5.417e-15 Identity = 37/58 (63.79%), Postives = 46/58 (79.31%), Query Frame = 1
Query: 511 DVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR 684
DV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCKVR + G KGIP++ T+D R
Sbjct: 88 DVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDAR 145
BLAST of CK937618 vs. ExPASy Swiss-Prot
Match: RS4C_SCHPO (40S ribosomal protein S4-C OS=Schizosaccharomyces pombe GN=rps4c PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.369e-32 Identity = 65/88 (73.86%), Postives = 72/88 (81.82%), Query Frame = 3
Query: 114 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMD 377
M RG KKHLKR+ AP HW+LDKL G +APKPS GPHK+RECLPLI+ LRNRLKYAL REV AILMQR + VD KVRTD T+P GFMD
Sbjct: 1 MVRGPKKHLKRVAAPHHWLLDKLSGTYAPKPSPGPHKARECLPLIVFLRNRLKYALNGREVKAILMQRLIKVDGKVRTDSTFPTGFMD 88 HSP 2 Score: 83.1889 bits (204), Expect = 1.425e-15 Identity = 36/58 (62.07%), Postives = 47/58 (81.03%), Query Frame = 1
Query: 511 DVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR 684
DV+S+ KT E+FRL+YD KGRF +H I EEAK+KLCKV+ VQ G KG+P++ T+DGR
Sbjct: 88 DVISVDKTGEHFRLVYDIKGRFTVHRITAEEAKYKLCKVKRVQLGAKGVPFLVTHDGR 145
BLAST of CK937618 vs. ExPASy Swiss-Prot
Match: RS4B_SCHPO (40S ribosomal protein S4-B OS=Schizosaccharomyces pombe GN=rps4b PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.369e-32 Identity = 65/88 (73.86%), Postives = 72/88 (81.82%), Query Frame = 3
Query: 114 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMD 377
M RG KKHLKR+ AP HW+LDKL G +APKPS GPHK+RECLPLI+ LRNRLKYAL REV AILMQR + VD KVRTD T+P GFMD
Sbjct: 1 MVRGPKKHLKRVAAPHHWLLDKLSGTYAPKPSPGPHKARECLPLIVFLRNRLKYALNGREVKAILMQRLIQVDGKVRTDSTFPTGFMD 88 HSP 2 Score: 83.1889 bits (204), Expect = 1.425e-15 Identity = 36/58 (62.07%), Postives = 47/58 (81.03%), Query Frame = 1
Query: 511 DVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR 684
DV+S+ KT E+FRL+YD KGRF +H I EEAK+KLCKV+ VQ G KG+P++ T+DGR
Sbjct: 88 DVISVEKTGEHFRLVYDIKGRFTVHRITAEEAKYKLCKVKRVQLGAKGVPFLVTHDGR 145
BLAST of CK937618 vs. ExPASy Swiss-Prot
Match: RS4A_SCHPO (40S ribosomal protein S4-A OS=Schizosaccharomyces pombe GN=rps4a PE=2 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 6.369e-32 Identity = 65/88 (73.86%), Postives = 72/88 (81.82%), Query Frame = 3
Query: 114 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMD 377
M RG KKHLKR+ AP HW+LDKL G +APKPS GPHK+RECLPLI+ LRNRLKYAL REV AILMQR + VD KVRTD T+P GFMD
Sbjct: 1 MVRGPKKHLKRVAAPHHWLLDKLSGTYAPKPSPGPHKARECLPLIVFLRNRLKYALNGREVKAILMQRLIKVDGKVRTDSTFPTGFMD 88 HSP 2 Score: 83.1889 bits (204), Expect = 1.425e-15 Identity = 36/58 (62.07%), Postives = 47/58 (81.03%), Query Frame = 1
Query: 511 DVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR 684
DV+S+ KT E+FRL+YD KGRF +H I EEAK+KLCKV+ VQ G KG+P++ T+DGR
Sbjct: 88 DVISVEKTGEHFRLVYDIKGRFTVHRITAEEAKYKLCKVKRVQLGAKGVPFLVTHDGR 145
BLAST of CK937618 vs. ExPASy Swiss-Prot
Match: RS4_IXOSC (40S ribosomal protein S4 OS=Ixodes scapularis GN=RpS4 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.318e-32 Identity = 67/88 (76.14%), Postives = 73/88 (82.95%), Query Frame = 3
Query: 114 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMD 377
MARG KKHLKRLNAPK WMLDKLGG FAP+PS+GPHK RE LPLI++LRNRLKYALT EV I+ QR + VD KVRTD YPAGFMD
Sbjct: 1 MARGPKKHLKRLNAPKSWMLDKLGGVFAPRPSTGPHKLRESLPLIIMLRNRLKYALTGAEVKKIVKQRLIKVDGKVRTDTNYPAGFMD 88 HSP 2 Score: 81.6481 bits (200), Expect = 4.148e-15 Identity = 37/58 (63.79%), Postives = 45/58 (77.59%), Query Frame = 1
Query: 511 DVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR 684
DVV+I KT E FRLLYD KGRF LH I EEAK+KLC+V+ VQ G KG+P++ T+D R
Sbjct: 88 DVVTIEKTGEFFRLLYDVKGRFTLHRITPEEAKYKLCRVKRVQVGPKGVPFLTTHDAR 145
BLAST of CK937618 vs. ExPASy Swiss-Prot
Match: RS4_CARGR (40S ribosomal protein S4 OS=Carabus granulatus GN=RpS4 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.318e-32 Identity = 65/88 (73.86%), Postives = 73/88 (82.95%), Query Frame = 3
Query: 114 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMD 377
MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQR + VD KVRTD YP+GFMD
Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNSEVTKIVMQRLIKVDGKVRTDPNYPSGFMD 88 HSP 2 Score: 81.6481 bits (200), Expect = 4.148e-15 Identity = 37/58 (63.79%), Postives = 46/58 (79.31%), Query Frame = 1
Query: 511 DVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR 684
DV++I KT E FRL+YD KGRF +H I EEAK+KLCKV+ VQ G KGIP++ T+DGR
Sbjct: 88 DVITIEKTGEFFRLIYDVKGRFTIHRITAEEAKYKLCKVKRVQTGPKGIPFLVTHDGR 145
BLAST of CK937618 vs. ExPASy Swiss-Prot
Match: RS4Y2_PANTR (40S ribosomal protein S4, Y isoform 2 OS=Pan troglodytes GN=RPS4Y2 PE=2 SV=3) HSP 1 Score: 137.117 bits (344), Expect = 8.318e-32 Identity = 66/88 (75.00%), Postives = 72/88 (81.82%), Query Frame = 3
Query: 114 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMD 377
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +D KVR D TYPAGFMD
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDITYPAGFMD 88 HSP 2 Score: 81.6481 bits (200), Expect = 4.148e-15 Identity = 37/58 (63.79%), Postives = 46/58 (79.31%), Query Frame = 1
Query: 511 DVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR 684
DV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCKVR + G KGIP++ T+D R
Sbjct: 88 DVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGTKGIPHLVTHDAR 145
BLAST of CK937618 vs. ExPASy Swiss-Prot
Match: RS4Y1_PONPY (40S ribosomal protein S4, Y isoform 1 OS=Pongo pygmaeus GN=RPS4Y1 PE=3 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 8.318e-32 Identity = 66/88 (75.00%), Postives = 72/88 (81.82%), Query Frame = 3
Query: 114 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMD 377
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +D KVR D TYPAGFMD
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDITYPAGFMD 88 HSP 2 Score: 78.9518 bits (193), Expect = 2.688e-14 Identity = 36/58 (62.07%), Postives = 45/58 (77.59%), Query Frame = 1
Query: 511 DVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR 684
DV+SI KT E+FRL+YDTKGRF + I EEAK+KLCKVR + G KGIP++ T+D R
Sbjct: 88 DVISIDKTGEHFRLVYDTKGRFAVQRITVEEAKYKLCKVRKITVGMKGIPHLVTHDAR 145 The following BLAST results are available for this feature:
BLAST of CK937618 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937618 ID=CK937618; Name=CK937618; organism=Citrus sinensis; type=EST; length=686bpback to top |