CK937618
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937618 vs. ExPASy Swiss-Prot
Match: RS4E_PYRIL (30S ribosomal protein S4e OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rps4e PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11 Identity = 34/82 (41.46%), Postives = 48/82 (58.54%), Query Frame = 3 Query: 135 HLKRLNAPKHWMLD-KLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMD 377 HL+R AP W + K+GG + + S GPH LPL +I+R+ LKYA T RE I+ + +V +D +R D +P G MD Sbjct: 3 HLRRTTAPYWWPIPRKIGGVWVVRSSPGPHSLAYSLPLAIIIRDVLKYAKTMREARYIISRGYVKIDGVIRKDYKFPVGLMD 84
BLAST of CK937618 vs. ExPASy Swiss-Prot
Match: RS4E_PYRAR (30S ribosomal protein S4e OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rps4e PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11 Identity = 35/82 (42.68%), Postives = 48/82 (58.54%), Query Frame = 3 Query: 135 HLKRLNAPKHWMLD-KLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMD 377 HL+R AP W + K GG + KPS GPH LPL +++R+ L+YA T RE I+ + ++ VD VR D +P G MD Sbjct: 3 HLRRSLAPYWWPIPRKAGGVWVVKPSPGPHSFAYSLPLAIVIRDVLRYAKTLREARYIVSRGYIKVDGVVRKDYRFPVGLMD 84
BLAST of CK937618 vs. ExPASy Swiss-Prot
Match: RS4E_KORCO (30S ribosomal protein S4e OS=Korarchaeum cryptofilum (strain OPF8) GN=rps4e PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11 Identity = 36/85 (42.35%), Postives = 49/85 (57.65%), Query Frame = 3 Query: 123 GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMD 377 G +HLK L AP ++ + K + KPS GPH E +PL+LI+R+ LK A T RE I+ + +LVD K R D + G MD Sbjct: 5 GGSRHLKSLAAPGYYPIAKRERVWVVKPSPGPHAIDEGIPLLLIVRDMLKLATTAREARRIISMKKILVDGKPRYDYKFQVGLMD 89
BLAST of CK937618 vs. ExPASy Swiss-Prot
Match: RS4E_THENV (30S ribosomal protein S4e OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rps4e PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11 Identity = 33/82 (40.24%), Postives = 49/82 (59.76%), Query Frame = 3 Query: 135 HLKRLNAPKHWMLD-KLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMD 377 HL+R +P W + K GG +A +PS GPH +PL L++R+ L+YA T RE I+ + ++ VD VR + +P G MD Sbjct: 3 HLRRTTSPYWWPIPRKAGGVWAVRPSPGPHSLAYSIPLALVIRDVLRYAKTLREARMIISRGYIKVDGVVRRNYKFPVGLMD 84
BLAST of CK937618 vs. ExPASy Swiss-Prot
Match: RS4E_PYRCJ (30S ribosomal protein S4e OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rps4e PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11 Identity = 34/82 (41.46%), Postives = 50/82 (60.98%), Query Frame = 3 Query: 135 HLKRLNAPKHWMLD-KLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMD 377 HL++ AP W + K GG +A +PS+GPH LPL +++R+ L+YA T RE I+ + ++ VD VR D +P G MD Sbjct: 3 HLRKSLAPYWWPIPRKAGGVWAVRPSTGPHSLEYSLPLAVVVRDVLRYAKTLREARYIISRGYIKVDGVVRKDYKFPIGLMD 84 The following BLAST results are available for this feature:
BLAST of CK937618 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937618 ID=CK937618; Name=CK937618; organism=Citrus sinensis; type=EST; length=686bpback to top |