CK937617
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937617 vs. ExPASy Swiss-Prot
Match: DCEC_LISMO (Probable glutamate decarboxylase gamma OS=Listeria monocytogenes GN=lmo2434 PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.495e-25 Identity = 54/149 (36.24%), Postives = 88/149 (59.06%), Query Frame = 1 Query: 4 ELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKD--SSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIE 444 EL+F ++YLG PT +NFS+ +SQII QYY F+R GFEGY+ I E A L + +EK+G FEI++ +P+V + +K+ T++++++ L GW VPAY +PA+ + + R V R D ++ E + + + +E Sbjct: 300 ELIFEVSYLGGSMPTMAINFSRSASQIIGQYYNFLRYGFEGYREIHEKTKKTAIYLAKTVEKSGYFEIINDGANLPIVCYKMKEGLDVEWTLYDLADQLLMKGWQVPAYPLPADLSDTIIQRFVCRADLGYNVAEEFAADFADAIHNLE 448
BLAST of CK937617 vs. ExPASy Swiss-Prot
Match: DCEB_SHIFL (Glutamate decarboxylase beta OS=Shigella flexneri GN=gadB PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.308e-24 Identity = 59/155 (38.06%), Postives = 89/155 (57.42%), Query Frame = 1 Query: 4 ELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEIL---SKDVGVPLVAFSLKDSS--AHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIESLP 453 ELVF+++YLG TF +NFS+ + Q+IAQYY+F+RLG EGY + A L + + K G +E + D G+P V F LKD +T++++SE LR GW VPA+T+ A ++ V+R++ R F E L+ + LK + P Sbjct: 298 ELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLSDHP 452
BLAST of CK937617 vs. ExPASy Swiss-Prot
Match: DCEB_ECOLI (Glutamate decarboxylase beta OS=Escherichia coli (strain K12) GN=gadB PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.308e-24 Identity = 59/155 (38.06%), Postives = 89/155 (57.42%), Query Frame = 1 Query: 4 ELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEIL---SKDVGVPLVAFSLKDSS--AHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIESLP 453 ELVF+++YLG TF +NFS+ + Q+IAQYY+F+RLG EGY + A L + + K G +E + D G+P V F LKD +T++++SE LR GW VPA+T+ A ++ V+R++ R F E L+ + LK + P Sbjct: 298 ELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLSDHP 452
BLAST of CK937617 vs. ExPASy Swiss-Prot
Match: DCEB_ECOL6 (Glutamate decarboxylase beta OS=Escherichia coli O6 GN=gadB PE=2 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 1.308e-24 Identity = 59/155 (38.06%), Postives = 89/155 (57.42%), Query Frame = 1 Query: 4 ELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEIL---SKDVGVPLVAFSLKDSS--AHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIESLP 453 ELVF+++YLG TF +NFS+ + Q+IAQYY+F+RLG EGY + A L + + K G +E + D G+P V F LKD +T++++SE LR GW VPA+T+ A ++ V+R++ R F E L+ + LK + P Sbjct: 298 ELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLSDHP 452
BLAST of CK937617 vs. ExPASy Swiss-Prot
Match: DCEB_ECO57 (Glutamate decarboxylase beta OS=Escherichia coli O157:H7 GN=gadB PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.308e-24 Identity = 59/155 (38.06%), Postives = 89/155 (57.42%), Query Frame = 1 Query: 4 ELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEIL---SKDVGVPLVAFSLKDSS--AHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIESLP 453 ELVF+++YLG TF +NFS+ + Q+IAQYY+F+RLG EGY + A L + + K G +E + D G+P V F LKD +T++++SE LR GW VPA+T+ A ++ V+R++ R F E L+ + LK + P Sbjct: 298 ELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLSDHP 452
BLAST of CK937617 vs. ExPASy Swiss-Prot
Match: DCEA_SHIFL (Glutamate decarboxylase alpha OS=Shigella flexneri GN=gadA PE=2 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 1.308e-24 Identity = 59/155 (38.06%), Postives = 89/155 (57.42%), Query Frame = 1 Query: 4 ELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEIL---SKDVGVPLVAFSLKDSS--AHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIESLP 453 ELVF+++YLG TF +NFS+ + Q+IAQYY+F+RLG EGY + A L + + K G +E + D G+P V F LKD +T++++SE LR GW VPA+T+ A ++ V+R++ R F E L+ + LK + P Sbjct: 298 ELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKQGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLSDHP 452
BLAST of CK937617 vs. ExPASy Swiss-Prot
Match: DCEA_ECOLI (Glutamate decarboxylase alpha OS=Escherichia coli (strain K12) GN=gadA PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.308e-24 Identity = 59/155 (38.06%), Postives = 89/155 (57.42%), Query Frame = 1 Query: 4 ELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEIL---SKDVGVPLVAFSLKDSS--AHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIESLP 453 ELVF+++YLG TF +NFS+ + Q+IAQYY+F+RLG EGY + A L + + K G +E + D G+P V F LKD +T++++SE LR GW VPA+T+ A ++ V+R++ R F E L+ + LK + P Sbjct: 298 ELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLSDHP 452
BLAST of CK937617 vs. ExPASy Swiss-Prot
Match: DCEA_ECOL6 (Glutamate decarboxylase alpha OS=Escherichia coli O6 GN=gadA PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.308e-24 Identity = 59/155 (38.06%), Postives = 89/155 (57.42%), Query Frame = 1 Query: 4 ELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEIL---SKDVGVPLVAFSLKDSS--AHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIESLP 453 ELVF+++YLG TF +NFS+ + Q+IAQYY+F+RLG EGY + A L + + K G +E + D G+P V F LKD +T++++SE LR GW VPA+T+ A ++ V+R++ R F E L+ + LK + P Sbjct: 298 ELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLSDHP 452
BLAST of CK937617 vs. ExPASy Swiss-Prot
Match: DCEA_ECO57 (Glutamate decarboxylase alpha OS=Escherichia coli O157:H7 GN=gadA PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.805e-24 Identity = 58/155 (37.42%), Postives = 89/155 (57.42%), Query Frame = 1 Query: 4 ELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEIL---SKDVGVPLVAFSLKDSS--AHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIESLP 453 ELVF+++YLG TF +NFS+ + Q+IAQYY+F+RLG EGY + A L + + K G +E + D G+P V F LK+ +T++++SE LR GW VPA+T+ A ++ V+R++ R F E L+ + LK + P Sbjct: 298 ELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKEGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLSDHP 452
BLAST of CK937617 vs. ExPASy Swiss-Prot
Match: GADB_DICDI (Glutamate decarboxylase B OS=Dictyostelium discoideum GN=gadB PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 7.935e-22 Identity = 55/155 (35.48%), Postives = 89/155 (57.42%), Query Frame = 1 Query: 4 ELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVG-VPLVAF----SLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIESLP 453 +LVF++NYLG + TF+LNFS+ QIIAQYY F+R G GY I + C + + L+K G F+++ G +P V + +L ++++SE LR GW V +Y++P++ +V V RVV+R FSR L + ++ ++ + P Sbjct: 294 DLVFNVNYLGGNMSTFSLNFSRPGGQIIAQYYNFLRHGRNGYTLIQDACAQQGIFIGKELKKMGIFDLIYDGTGALPGVCWTISKNLPSEPLFNLYDLSEKLRSRGWQVASYSLPSSMNDVVVSRVVIRHGFSRDLSSLFVKDVQNAIEYFQKHP 448 The following BLAST results are available for this feature:
BLAST of CK937617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937617 ID=CK937617; Name=CK937617; organism=Citrus sinensis; type=EST; length=808bpback to top |