CK937613
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937613 vs. ExPASy Swiss-Prot
Match: RS17_SULTO (30S ribosomal protein S17P OS=Sulfolobus tokodaii GN=rps17p PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.227e-17 Identity = 42/86 (48.84%), Postives = 57/86 (66.28%), Query Frame = 1 Query: 262 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVL 519 D CPF G + +RG IL G + +T +V R+YL + KY+RYE+R S I HI PC VKEGD+VII +CRP++K+V F V+ Sbjct: 28 DINCPFHGNLRVRGIILEGRLIRYRAEKTGVVERDYLFYDTKYKRYERRRSRIHVHIPPCLDVKEGDNVIIAECRPIAKSVSFVVI 113
BLAST of CK937613 vs. ExPASy Swiss-Prot
Match: RS17_METVA (30S ribosomal protein S17P OS=Methanococcus vannielii GN=rps17p PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.093e-17 Identity = 42/105 (40.00%), Postives = 63/105 (60.00%), Query Frame = 1 Query: 208 SMGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 522 ++G+ K P E D CPF GT+S+RG+I G K + TI+++R ++ KY+RYEKR +++ AH PC K GD V + +CRP+SKT F V++ Sbjct: 3 NIGIDVKAPENVCE----DVNCPFHGTLSVRGQIFEGVVSGDKGHNTIVIKREVTGYISKYERYEKRTTSLVAHNPPCINAKTGDVVKVMECRPVSKTKSFVVIE 103
BLAST of CK937613 vs. ExPASy Swiss-Prot
Match: RS17_PICTO (30S ribosomal protein S17P OS=Picrophilus torridus GN=rps17p PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.733e-17 Identity = 44/108 (40.74%), Postives = 66/108 (61.11%), Query Frame = 1 Query: 205 KSMGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 528 +++G+ K P E T D KCPF G + I G+I+ GT S KMN +I+++R +KKY+RYE + S AH+ C V+ GD V I +CR L+KT+ F V++ + Sbjct: 2 ENIGIDVKKP----ERTCNDPKCPFHGNLRIHGQIIVGTVVSTKMNGSIVLKRESRRLIKKYERYETKISKFHAHLPGCIDVRPGDRVKIAECRKLAKTISFVVVEKV 105
BLAST of CK937613 vs. ExPASy Swiss-Prot
Match: RS17_PYRFU (30S ribosomal protein S17P OS=Pyrococcus furiosus GN=rps17p PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.570e-17 Identity = 45/108 (41.67%), Postives = 61/108 (56.48%), Query Frame = 1 Query: 205 KSMGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 528 + +GL + P E + D KCP+ G + I GR+ G S K +T+ V R Y ++ KY+RYE R S I AH PC K GD V+I + RPLSKT F V+ V+ Sbjct: 3 RDIGLRVQPPAEKCD----DPKCPWHGNLKIHGRVFEGIVVSDKPRKTVTVERQYYFYLNKYERYELRRSKIHAHNPPCINAKVGDKVLIAETRPLSKTKHFVVVAVL 106
BLAST of CK937613 vs. ExPASy Swiss-Prot
Match: RS17_HALMA (30S ribosomal protein S17P OS=Haloarcula marismortui GN=rps17p PE=1 SV=3) HSP 1 Score: 88.1965 bits (217), Expect = 4.662e-17 Identity = 47/115 (40.87%), Postives = 63/115 (54.78%), Query Frame = 1 Query: 208 SMGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGA 552 ++GL + P E T D+ CPF G +S+RG+ L G S M +T++V R Y V KY R+ KR S +PAH C + GD V I +CRPLSKT V+ V+ G A Sbjct: 2 ALGLNVQEPEE----TCADQNCPFHGELSVRGQTLNGEVASTDMEKTVVVEREYDVKVPKYDRFMKRRSRVPAHAPDCLDLAVGDTVTIAECRPLSKTKSHVVVGVVADEQDGDA 112
BLAST of CK937613 vs. ExPASy Swiss-Prot
Match: RS17_METMP (30S ribosomal protein S17P OS=Methanococcus maripaludis GN=rps17p PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.089e-17 Identity = 42/105 (40.00%), Postives = 64/105 (60.95%), Query Frame = 1 Query: 208 SMGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 522 ++G+ K P E D CPF GT+S+RG+I G S K + TI+++R ++ KY+RYEKR +++ AH C + K GD V + +CRP+SKT F V++ Sbjct: 3 NIGIDVKAPENVCE----DPNCPFHGTLSVRGQIFEGIVTSDKGHDTIVIKREVTGYISKYERYEKRTTSLVAHNPACIKAKVGDTVKVMECRPISKTKSFVVIE 103
BLAST of CK937613 vs. ExPASy Swiss-Prot
Match: RS17_HALWD (30S ribosomal protein S17P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rps17p PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.953e-17 Identity = 49/112 (43.75%), Postives = 64/112 (57.14%), Query Frame = 1 Query: 208 SMGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSS 543 ++GL P E + D CPF G++S+RG+ L GT S M++T+IV R Y V KY R KR S IPAH PC + EGD V I + RPLSKT V++ I G + Sbjct: 2 AIGLNVTEP----EVSCADTNCPFHGSLSVRGQTLEGTVASTDMDKTVIVEREYDVRVPKYDRLMKRRSRIPAHAPPCVDLAEGDTVRIAETRPLSKTKSHVVVEQIDTGGA 109
BLAST of CK937613 vs. ExPASy Swiss-Prot
Match: RS17_PYRKO (30S ribosomal protein S17P OS=Pyrococcus kodakaraensis GN=rps17p PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.357e-16 Identity = 43/108 (39.81%), Postives = 62/108 (57.41%), Query Frame = 1 Query: 205 KSMGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 528 + +GL + P E D KCP+ G + I GR + G S K +T++V R Y H++KKY+RYE R S + AH C K GD V+I + RP+SKT + V+ V+ Sbjct: 2 REIGLRVQPPAEVCN----DPKCPWHGNLKIHGRYVEGIVVSDKGKKTVVVERQYYHYLKKYERYELRKSKVHAHNPECINAKVGDKVLIAETRPISKTKSWVVVAVL 105
BLAST of CK937613 vs. ExPASy Swiss-Prot
Match: RS17_METJA (30S ribosomal protein S17P OS=Methanocaldococcus jannaschii GN=rps17p PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.357e-16 Identity = 39/106 (36.79%), Postives = 65/106 (61.32%), Query Frame = 1 Query: 205 KSMGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 522 +++G+ K P + DK CPF G + +RG+ G S K ++T+I++R + ++KKY+RYE+R + + AH PC + GD V + +CRP+SKT F V++ Sbjct: 4 RNIGIQVKAPEVECD----DKNCPFHGNLPVRGQSFVGVVVSDKPHKTVIIKREVVKYIKKYERYERRTTKLAAHNPPCIHARVGDIVRVMECRPISKTKAFVVVE 105
BLAST of CK937613 vs. ExPASy Swiss-Prot
Match: RS17_ARCFU (30S ribosomal protein S17P OS=Archaeoglobus fulgidus GN=rps17p PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.314e-16 Identity = 41/108 (37.96%), Postives = 64/108 (59.26%), Query Frame = 1 Query: 205 KSMGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 528 + +G+ K P E D+ CPF GT+S+RG++L G +T ++ R + +V K++RY K+ S + AH C R + GD V IG+CRP+SKT F +L+V+ Sbjct: 2 RDIGIDVKPPERECE----DENCPFHGTLSVRGQLLRGKVVKV-YGKTAVIERELIRYVPKFERYMKKRSKLHAHNPRCIRARPGDIVTIGECRPISKTKSFVILEVV 104 The following BLAST results are available for this feature:
BLAST of CK937613 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937613 ID=CK937613; Name=CK937613; organism=Citrus sinensis; type=EST; length=702bpback to top |