EY665887

Overview
NameEY665887
Unique NameEY665887
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length772
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665887 vs. ExPASy Swiss-Prot
Match: RS19S_ASCSU (40S ribosomal protein S19S OS=Ascaris suum GN=RPS19S PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.088e-33
Identity = 67/135 (49.63%), Postives = 93/135 (68.89%), Query Frame = 1
Query:   85 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYFRGGLGVGSFRRIYGGGKRNGSCPPHFSKSSGSVARHILHQLQNTNIIELDSKG-GRRITSSGQRDLDQVAGRI 486
            +VKDV  HE V+  A  LK+SGK+++P W+D+VK G  KELAP D DWYY+R AS+AR++Y R   GVG+ RR+YGG KR G  P HF+++SGSV R  L  L+    +E    G GR +T  G++DLD++A ++
Sbjct:    6 SVKDVDQHEIVRYIAGFLKKSGKVKVPEWSDLVKLGITKELAPVDSDWYYVRTASVARRLYIRSPTGVGALRRVYGGNKRRGVTPNHFARASGSVIRKALQTLEAIKWVEKHPDGNGRILTKQGRKDLDRIASQM 140          
BLAST of EY665887 vs. ExPASy Swiss-Prot
Match: RS19A_DROME (40S ribosomal protein S19a OS=Drosophila melanogaster GN=RpS19a PE=2 SV=3)

HSP 1 Score: 143.28 bits (360), Expect = 1.421e-33
Identity = 66/133 (49.62%), Postives = 90/133 (67.67%), Query Frame = 1
Query:   88 VKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYFRGGLGVGSFRRIYGGGKRNGSCPPHFSKSSGSVARHILHQLQNTNIIELDSKGGRRITSSGQRDLDQVAGRI 486
            VKD+  H   KA A  LK++GK+++P   DIVKT   KELAPYDPDW+Y+R AS+ R +Y R   GVGS  +IYGG KRNG  P HF +++   AR  L  L++  ++E    GGR+++S GQRDLD++A +I
Sbjct:    6 VKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGGRKLSSIGQRDLDRIANQI 138          
BLAST of EY665887 vs. ExPASy Swiss-Prot
Match: RS19_EMENI (40S ribosomal protein S19 OS=Emericella nidulans GN=rps19 PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 9.212e-33
Identity = 68/131 (51.91%), Postives = 88/131 (67.18%), Query Frame = 1
Query:   88 VKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYFRGGLGVGSFRRIYGGGKRNGSCPPHFSKSSGSVARHILHQLQNTNIIELD-SKGGRRITSSGQRDLDQVA 477
            V+DV   +F+ AYAA LKR GK+ +P W D VKT    EL P D DWYY+RAA++AR IY R  +GVG  R+++G  K  GS P H   +SG+V R +L  L+   ++E D  KGGRRIT SGQRDLD++A
Sbjct:    6 VRDVDAQKFIVAYAAFLKRQGKLPIPGWVDTVKTSASNELPPQDADWYYVRAAAVARHIYLRKTVGVGRLRKVHGSTKNRGSRPAHHVDASGAVDRKVLQSLEKIGVLEQDEEKGGRRITQSGQRDLDRIA 136          
BLAST of EY665887 vs. ExPASy Swiss-Prot
Match: RS19_CAEEL (40S ribosomal protein S19 OS=Caenorhabditis elegans GN=rps-19 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.572e-32
Identity = 65/137 (47.45%), Postives = 93/137 (67.88%), Query Frame = 1
Query:   70 METAKNVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYFRGGLGVGSFRRIYGGGKRNGSCPPHFSKSSGSVARHILHQLQNTNIIELDSKG-GRRITSSGQRDLDQVA 477
            M  A ++KDV  HE  K+ A  LK+SGK+++P W+D+VK G  KELAP DPDW+Y RAAS+AR +YFR   G+G+F+++YGG KR G  P HF  S+G+  R  + QL+    +E    G GR ++  G++DLD++A
Sbjct:    1 MTRATSIKDVDQHEATKSIAHFLKKSGKVKVPEWSDLVKLGVNKELAPVDPDWFYTRAASLARHLYFRPA-GIGAFKKVYGGNKRRGVAPNHFQTSAGNCLRKAVQQLEKIKWVEKHPDGKGRILSKQGRKDLDRIA 136          
BLAST of EY665887 vs. ExPASy Swiss-Prot
Match: RS19_ENTHI (40S ribosomal protein S19 OS=Entamoeba histolytica GN=RPS19 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.737e-31
Identity = 66/138 (47.83%), Postives = 90/138 (65.22%), Query Frame = 1
Query:   70 METAKNVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYFRGGLGVGSFRRIYGGGKRNGSCPPHFSKSSGSVARHILHQLQNTNIIELDSKGGRRITSSGQRDLDQVAGR 483
            M    N+KDV   +F+KAYA HLK+SGK+E+P W D VKTG  KELAP +PDW YIRAA++ARK+Y   G+GV + RR YG        P H +  SG V R+IL QL+   I+    + GR +T  G++D+D++A +
Sbjct:    1 MHHFSNIKDVVAIDFIKAYAEHLKKSGKLEIPEWVDTVKTGMCKELAPLNPDWIYIRAAAIARKVYLNNGIGVMALRRAYGDQYNKHYYPSHRTLGSGKVNRYILQQLEKMGIVG-KIQSGRSLTKEGRKDMDKIASK 137          
BLAST of EY665887 vs. ExPASy Swiss-Prot
Match: RS19G_ASCSU (40S ribosomal protein S19G OS=Ascaris suum GN=RPS19G PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.963e-31
Identity = 65/140 (46.43%), Postives = 92/140 (65.71%), Query Frame = 1
Query:   70 METAKNVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYFRGGLGVGSFRRIYGGGKRNGSCPPHFSKSSGSVARHILHQLQNTNIIELDSKG-GRRITSSGQRDLDQVAGRI 486
            M  A +VKDV  HE V+  A  LK+SGK+++P W+D+ K G  KELAP + DWYY+R AS+AR++Y R   GV + R +YGG KR G  P HF+K+SGSV R  L  L+    ++    G GR +T  G++DLD++A ++
Sbjct:    1 MVKATSVKDVDQHEIVQHIAKFLKKSGKVKVPEWSDVTKMGISKELAPLNSDWYYVRTASIARRLYVRSPTGVDALRLVYGGSKRRGVVPNHFAKASGSVIRKALQTLEAIKWVQKHPDGNGRVLTKQGRKDLDRIASQM 140          
BLAST of EY665887 vs. ExPASy Swiss-Prot
Match: RS19B_YEAST (40S ribosomal protein S19-B OS=Saccharomyces cerevisiae GN=RPS19B PE=1 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 3.623e-29
Identity = 62/134 (46.27%), Postives = 91/134 (67.91%), Query Frame = 1
Query:   85 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPD-WYYIRAASMARKIYFRGGLGVGSFRRIYGGGKRNGSCPPHFSKSSGSVARHILHQLQNTNIIELDSKGGRRITSSGQRDLDQVAGR 483
            +V+DV+  +F+ AYA+ L+R GK+E+P + DIVKT +  E+ P D + W+Y RAAS+AR IY R  +GVG   ++YGG K  G  P     +SGS+ R +L  L+   I+E+  KGGRRI+ +GQRDLD++A +
Sbjct:    5 SVRDVAAQDFINAYASFLQRQGKLEVPGYVDIVKTSSGNEMPPQDAEGWFYKRAASVARHIYMRKQVGVGKLNKLYGGAKSRGVRPYKHIDASGSINRKVLQALEKIGIVEISPKGGRRISENGQRDLDRIAAQ 138          
BLAST of EY665887 vs. ExPASy Swiss-Prot
Match: RS19A_YEAST (40S ribosomal protein S19-A OS=Saccharomyces cerevisiae GN=RPS19A PE=1 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 3.623e-29
Identity = 62/134 (46.27%), Postives = 91/134 (67.91%), Query Frame = 1
Query:   85 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPD-WYYIRAASMARKIYFRGGLGVGSFRRIYGGGKRNGSCPPHFSKSSGSVARHILHQLQNTNIIELDSKGGRRITSSGQRDLDQVAGR 483
            +V+DV+  +F+ AYA+ L+R GK+E+P + DIVKT +  E+ P D + W+Y RAAS+AR IY R  +GVG   ++YGG K  G  P     +SGS+ R +L  L+   I+E+  KGGRRI+ +GQRDLD++A +
Sbjct:    5 SVRDVAAQDFINAYASFLQRQGKLEVPGYVDIVKTSSGNEMPPQDAEGWFYKRAASVARHIYMRKQVGVGKLNKLYGGAKSRGVRPYKHIDASGSINRKVLQALEKIGIVEISPKGGRRISENGQRDLDRIAAQ 138          
BLAST of EY665887 vs. ExPASy Swiss-Prot
Match: RS19B_DROME (40S ribosomal protein S19b OS=Drosophila melanogaster GN=RpS19b PE=1 SV=3)

HSP 1 Score: 119.398 bits (298), Expect = 2.198e-26
Identity = 59/133 (44.36%), Postives = 80/133 (60.15%), Query Frame = 1
Query:   88 VKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYFRGGLGVGSFRRIYGGGKRNGSCPPHFSKSSGSVARHILHQLQNTNIIELDSKGGRRITSSGQRDLDQVAGRI 486
            VK++  H   K  AA LK+SGKI +P     +KTG  KE AP D DW+Y R AS+ R +Y R   GVG+F ++Y G KRNG  P    +SS    R  L  L+  N++E    GGR++T  GQR+LD++A +I
Sbjct:    6 VKEIDQHVLTKNMAAFLKKSGKIFVPEQAVYMKTGKFKETAPTDDDWFYTRCASIMRHLYLRSPAGVGAFTKVYSGRKRNGVRPSKHCRSSDGCIRKALQALEAANMVERHPDGGRKLTPQGQRNLDRIANKI 138          
BLAST of EY665887 vs. ExPASy Swiss-Prot
Match: RS19E_METTH (30S ribosomal protein S19e OS=Methanobacterium thermoautotrophicum GN=rps19e PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.284e-22
Identity = 53/133 (39.85%), Postives = 77/133 (57.89%), Query Frame = 1
Query:   88 VKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYFRGGLGVGSFRRIYGGGKRNGSCPPHFSKSSGSVARHILHQLQNTNIIELDSKGGRRITSSGQRDLDQVAGRI 486
            V DV     +   A  LK   K++ P W + VKTG  KE  P +PDW+Y+RAA++ R++Y  G +GV S R  YGG K  GS P  F + SG++ R  L QL+ + +I+ + + GR IT  G+  LD+ A  +
Sbjct:    4 VYDVPADLLINRVAEELKNDSKVKSPEWVNFVKTGVHKERRPENPDWWYVRAAALLRRVYIDGPVGVNSLRTHYGGKKDRGSRPEKFRRGSGAIIRRALQQLEESGLIKRE-ENGRVITPEGRSFLDKAAAEV 135          
The following BLAST results are available for this feature:
BLAST of EY665887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
RS19S_ASCSU1.088e-3349.6340S ribosomal protein S19S OS=Ascaris suum GN=RPS1... [more]
RS19A_DROME1.421e-3349.6240S ribosomal protein S19a OS=Drosophila melanogas... [more]
RS19_EMENI9.212e-3351.9140S ribosomal protein S19 OS=Emericella nidulans G... [more]
RS19_CAEEL4.572e-3247.4540S ribosomal protein S19 OS=Caenorhabditis elegan... [more]
RS19_ENTHI1.737e-3147.8340S ribosomal protein S19 OS=Entamoeba histolytica... [more]
RS19G_ASCSU2.963e-3146.4340S ribosomal protein S19G OS=Ascaris suum GN=RPS1... [more]
RS19B_YEAST3.623e-2946.2740S ribosomal protein S19-B OS=Saccharomyces cerev... [more]
RS19A_YEAST3.623e-2946.2740S ribosomal protein S19-A OS=Saccharomyces cerev... [more]
RS19B_DROME2.198e-2644.3640S ribosomal protein S19b OS=Drosophila melanogas... [more]
RS19E_METTH3.284e-2239.8530S ribosomal protein S19e OS=Methanobacterium the... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-006-G09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665887 ID=EY665887; Name=EY665887; organism=Citrus sinensis; type=EST; length=772bp
ACAGTCACATAGCACATGCCGCAGCTGCTCCGCCGCTGAAGCACAGACTG
AGAGAGAGACAGAGAGAGAATGGAGACTGCAAAAAATGTGAAGGACGTCT
CTCCCCACGAGTTCGTCAAGGCCTACGCCGCCCATCTCAAACGCTCCGGC
AAGATTGAGCTTCCTACTTGGAACGACATCGTCAAGACTGGAACGTTGAA
GGAGCTAGCCCCTTATGACCCCGATTGGTACTATATCAGGGCTGCTTCAA
TGGCGAGGAAGATCTACTTTAGGGGTGGTCTTGGTGTTGGTTCCTTCCGT
AGAATCTATGGAGGGGGGAAGAGGAACGGTAGCTGCCCACCTCATTTCAG
CAAGAGCAGTGGCTCTGTTGCTCGTCACATACTTCACCAATTGCAGAACA
CGAACATCATCGAGCTTGACTCCAAGGGTGGAAGGAGAATCACATCCAGT
GGGCAGCGGGATCTTGATCAAGTTGCTGGACGGATTGCAGTTGTTGCCCC
CTTGAGGGATTAGCTCAAGCTTTCAAAAAGGATTGATGTTATTGAGCTAG
TTGTTTGAATGGGAGTAGGAGAAAAAAAGCATCCGCAAGTTTGATTTTCA
GTTCTTCTGGGTAATAACCTAAGAATGAATGGTAAAGGAAATTTCTTTTC
TCCATTTAAAAAAAAAAAAAAAAAAAAAAGGGGGGCCCGCCTCTAAAGAA
TCACACTTTACTAACGCGTGGTATGAGACCCCACAGGATCTCAACCACCT
TCCCACTACTATAAATCCACCA
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