CK937612
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937612 vs. ExPASy Swiss-Prot
Match: IDHC_RAT (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus GN=Idh1 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.114e-18 Identity = 32/50 (64.00%), Postives = 42/50 (84.00%), Query Frame = 3 Query: 480 QLIFPYLDLDIKYYDLGILNRDATDDKVTVESAESTLKYNVAIKCATITP 629 +LI PY++LD+ YDLGI NRDAT+D+VT ++AE+ KYNV +KCATITP Sbjct: 29 KLILPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNVGVKCATITP 78 HSP 2 Score: 41.2022 bits (95), Expect = 3.114e-18 Identity = 16/26 (61.54%), Postives = 22/26 (84.62%), Query Frame = 2 Query: 314 IVEMDGDEMTRIIWQMIKDKVCFTYL 391 +VEM GDEMTRIIW++IK+K+ Y+ Sbjct: 10 VVEMQGDEMTRIIWELIKEKLILPYV 35
BLAST of CK937612 vs. ExPASy Swiss-Prot
Match: IDHC_MOUSE (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mus musculus GN=Idh1 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.114e-18 Identity = 32/50 (64.00%), Postives = 42/50 (84.00%), Query Frame = 3 Query: 480 QLIFPYLDLDIKYYDLGILNRDATDDKVTVESAESTLKYNVAIKCATITP 629 +LI PY++LD+ YDLGI NRDAT+D+VT ++AE+ KYNV +KCATITP Sbjct: 29 KLILPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNVGVKCATITP 78 HSP 2 Score: 41.2022 bits (95), Expect = 3.114e-18 Identity = 16/26 (61.54%), Postives = 22/26 (84.62%), Query Frame = 2 Query: 314 IVEMDGDEMTRIIWQMIKDKVCFTYL 391 +VEM GDEMTRIIW++IK+K+ Y+ Sbjct: 10 VVEMQGDEMTRIIWELIKEKLILPYV 35
BLAST of CK937612 vs. ExPASy Swiss-Prot
Match: IDHC_MICOH (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Microtus ochrogaster GN=IDH1 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.114e-18 Identity = 32/50 (64.00%), Postives = 42/50 (84.00%), Query Frame = 3 Query: 480 QLIFPYLDLDIKYYDLGILNRDATDDKVTVESAESTLKYNVAIKCATITP 629 +LI PY++LD+ YDLGI NRDAT+D+VT ++AE+ KYNV +KCATITP Sbjct: 29 KLILPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNVGVKCATITP 78 HSP 2 Score: 41.2022 bits (95), Expect = 3.114e-18 Identity = 16/26 (61.54%), Postives = 22/26 (84.62%), Query Frame = 2 Query: 314 IVEMDGDEMTRIIWQMIKDKVCFTYL 391 +VEM GDEMTRIIW++IK+K+ Y+ Sbjct: 10 VVEMQGDEMTRIIWELIKEKLILPYV 35
BLAST of CK937612 vs. ExPASy Swiss-Prot
Match: IDHC_MICME (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Microtus mexicanus GN=IDH1 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.114e-18 Identity = 32/50 (64.00%), Postives = 42/50 (84.00%), Query Frame = 3 Query: 480 QLIFPYLDLDIKYYDLGILNRDATDDKVTVESAESTLKYNVAIKCATITP 629 +LI PY++LD+ YDLGI NRDAT+D+VT ++AE+ KYNV +KCATITP Sbjct: 29 KLILPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNVGVKCATITP 78 HSP 2 Score: 41.2022 bits (95), Expect = 3.114e-18 Identity = 16/26 (61.54%), Postives = 22/26 (84.62%), Query Frame = 2 Query: 314 IVEMDGDEMTRIIWQMIKDKVCFTYL 391 +VEM GDEMTRIIW++IK+K+ Y+ Sbjct: 10 VVEMQGDEMTRIIWELIKEKLILPYV 35
BLAST of CK937612 vs. ExPASy Swiss-Prot
Match: IDHC_SOLTU (Isocitrate dehydrogenase [NADP] OS=Solanum tuberosum GN=ICDH-1 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.323e-15 Identity = 39/50 (78.00%), Postives = 46/50 (92.00%), Query Frame = 3 Query: 480 QLIFPYLDLDIKYYDLGILNRDATDDKVTVESAESTLKYNVAIKCATITP 629 +LI P+L+LDIKY+ LG+ +RDATDDKVTVESAE+T KYNVAIKCATITP Sbjct: 31 KLILPFLELDIKYFSLGLPHRDATDDKVTVESAEATQKYNVAIKCATITP 80
BLAST of CK937612 vs. ExPASy Swiss-Prot
Match: IDHC_DICDI (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Dictyostelium discoideum GN=idhC PE=1 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 2.851e-15 Identity = 28/50 (56.00%), Postives = 39/50 (78.00%), Query Frame = 3 Query: 480 QLIFPYLDLDIKYYDLGILNRDATDDKVTVESAESTLKYNVAIKCATITP 629 +LIFP+LDL ++ YDLGI RD T+D+VT+++A + + V IKCATITP Sbjct: 30 KLIFPFLDLKVETYDLGIEYRDKTNDQVTIDAANAIKRLKVGIKCATITP 79 HSP 2 Score: 40.4318 bits (93), Expect = 2.851e-15 Identity = 14/35 (40.00%), Postives = 25/35 (71.43%), Query Frame = 2 Query: 287 IDRVKVQNPIVEMDGDEMTRIIWQMIKDKVCFTYL 391 ++++ V NP+ + GDE TR+IW +I+ K+ F +L Sbjct: 2 VEKIIVSNPVANLLGDEQTRVIWDLIEKKLIFPFL 36
BLAST of CK937612 vs. ExPASy Swiss-Prot
Match: IDHC_YEAST (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Saccharomyces cerevisiae GN=IDP2 PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.759e-13 Identity = 33/50 (66.00%), Postives = 43/50 (86.00%), Query Frame = 3 Query: 480 QLIFPYLDLDIKYYDLGILNRDATDDKVTVESAESTLKYNVAIKCATITP 629 +L+ PYLD+D+KYYDL + RD T+D+VTV+SA +TLKY VA+KCATITP Sbjct: 29 KLVLPYLDVDLKYYDLSVEYRDQTNDQVTVDSATATLKYGVAVKCATITP 78
BLAST of CK937612 vs. ExPASy Swiss-Prot
Match: IDHH_YEAST (Isocitrate dehydrogenase [NADP] OS=Saccharomyces cerevisiae GN=IDP3 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.048e-12 Identity = 33/50 (66.00%), Postives = 42/50 (84.00%), Query Frame = 3 Query: 480 QLIFPYLDLDIKYYDLGILNRDATDDKVTVESAESTLKYNVAIKCATITP 629 +LI PYLD+D+KYYDL I RD T+D+VT +S+ +TLKY VA+KCATITP Sbjct: 29 KLILPYLDVDLKYYDLSIQERDRTNDQVTKDSSYATLKYGVAVKCATITP 78
BLAST of CK937612 vs. ExPASy Swiss-Prot
Match: IDHP_YEAST (Isocitrate dehydrogenase [NADP], mitochondrial OS=Saccharomyces cerevisiae GN=IDP1 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.788e-12 Identity = 32/50 (64.00%), Postives = 41/50 (82.00%), Query Frame = 3 Query: 480 QLIFPYLDLDIKYYDLGILNRDATDDKVTVESAESTLKYNVAIKCATITP 629 +LI PYLD+D+KYYDL + +RDAT DK+T ++AE+ KY V IKCATITP Sbjct: 45 KLILPYLDVDLKYYDLSVESRDATSDKITQDAAEAIKKYGVGIKCATITP 94
BLAST of CK937612 vs. ExPASy Swiss-Prot
Match: IDH_SPHYA (Isocitrate dehydrogenase [NADP] OS=Sphingomonas yanoikuyae GN=icd PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.813e-11 Identity = 27/50 (54.00%), Postives = 39/50 (78.00%), Query Frame = 3 Query: 480 QLIFPYLDLDIKYYDLGILNRDATDDKVTVESAESTLKYNVAIKCATITP 629 +LI PYLD+D+KYYDL + RD T D++T+++A + +Y V +KCATITP Sbjct: 29 RLILPYLDVDLKYYDLSVEKRDETSDQITIDAANAIKEYGVGVKCATITP 78 The following BLAST results are available for this feature:
BLAST of CK937612 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK937612 ID=CK937612; Name=CK937612; organism=Citrus sinensis; type=EST; length=766bpback to top |