CK937611
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_METNO (ATP synthase gamma chain OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=atpG PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.863e-18 Identity = 61/195 (31.28%), Postives = 103/195 (52.82%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLG----------DTPTVDA-----KKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLXXE 784 S + +RNR+ SVK QKITKAM+MVAA+KLR Q AEN+R + A+LG +TP + A + +++V ++++GLCG NS+ ++++ + K K + +G+K IL R+ + I +I L + + +++L EFD + YS+F SV++ +PT ++ E Sbjct: 3 SLKDLRNRIASVKATQKITKAMQMVAAAKLRRAQNAAENARPYAERMAAVLGNLATNLTPGAETPRLLAGTGADRVHLLVVCTAERGLCGAFNSSIARLARDHARRLVAEGKTVKIICVGKKGYDILRREFRDQIVELIELRGVRQLGFENAEAVTENLLNRFEAGEFDIATLFYSRFRSVIAQVPTAQQIIPAE 197
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_DINSH (ATP synthase gamma chain OS=Dinoroseobacter shibae (strain DFL 12) GN=atpG PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.046e-18 Identity = 60/188 (31.91%), Postives = 104/188 (55.32%), Query Frame = 2 Query: 266 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALL-------GDTP--------TVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVL 775 ++NR++SVK+ +KITKAM+MVAA+KLR Q AE SR + F A+L GD+ T + +++V +++++GLCGG NS+ K++++ + K K + +G+K + L RD K + + ++Y + +A D+L EFD I +++F SV+S +PT ++ Sbjct: 7 LKNRIESVKSTRKITKAMQMVAAAKLRRAQDAAEASRPYTERFNAVLAGLAASVGDSDSGPRLLVGTGSDQTHLLVVMTAERGLCGGFNSSIAKLARAHAEKLVAQGKTVKILTVGKKGREQLKRDLSKHFIGHVDLSEVKRVSYDNAADIAADVLGRFDAGEFDVATIFFNRFQSVISQIPTAQQII 194
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_METC4 (ATP synthase gamma chain OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=atpG PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.607e-18 Identity = 62/195 (31.79%), Postives = 97/195 (49.74%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLXXE 784 S + +RNR+ SVK QKITKAM+MVAA+KLR Q AEN R + +LG+ + T + +++V + D+GL G NS+ ++++ K K + +G+K +L R + I P++Y + +ADDIL EFD + YS+F SV+S +PT ++ E Sbjct: 3 SLKDLRNRITSVKATQKITKAMQMVAAAKLRRAQNAAENGRPYAERMAQVLGNLAGNLIGGVGAPRLLSGTGQDRVHLLVVCTGDRGLAGAFNSSIARLARDHANRLMADGKTVKIITIGKKGLDVLRRQFRDQIIASRDIRGNKPVDYPFAAEIADDILARFEAGEFDVATLFYSEFRSVISQIPTAQKLIPAE 197
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_RHOCS (ATP synthase gamma chain OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=atpG PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.124e-17 Identity = 61/192 (31.77%), Postives = 98/192 (51.04%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVL 775 S + +RNR+ SVK+ QKIT AMKMVAASKLR Q +AE R +L T T + +++V ++SD+GLCGG NST V+ ++ K +G + K + +G K + +L R+ I ++ + L++ + +L+ EFD +IY+KF S ++ + T V+ Sbjct: 3 SLKDIRNRIGSVKSTQKITSAMKMVAASKLRRAQEQAEAGRPFADRMARMLASLAANVSGATGGPRLMTGTGSDQVHLLVVVTSDRGLCGGFNSTIVREARRTIKRLTGEGRTVKLLCVGRKGRDLLRREYAGMIVHSFEDVGRRRLSFADADRITAKVLELFEAGEFDVATVIYNKFRSAITQVVTAQQVI 194
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_METS4 (ATP synthase gamma chain OS=Methylobacterium sp. (strain 4-46) GN=atpG PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.124e-17 Identity = 59/195 (30.26%), Postives = 102/195 (52.31%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD-----TPTVDAKK----------NVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLXXE 784 S + +RNR+ SVK QKITKAM+MVAA+KLR Q AEN+R + A+LG+ TP + + ++++ ++++GLCG NS+ ++++ + + + K + +G+K IL R+ + I +I L + +A ++L EFD + YS+F SV+ +PT ++ E Sbjct: 3 SLKDLRNRIASVKATQKITKAMQMVAAAKLRRAQNAAENARPYAERMAAVLGNLATNLTPGAETPRLLSGTGADRVHLLLVCTAERGLCGAFNSSIARLARDHARRLTAEGRTVKIICVGKKGYDILRREFRDQIVELIELRGVRQLGFDNAETIAQNLLGRFEAGEFDIATLFYSRFRSVIVQIPTAQQIIPAE 197
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_SILST (ATP synthase gamma chain OS=Silicibacter sp. (strain TM1040) GN=atpG PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.504e-17 Identity = 64/198 (32.32%), Postives = 107/198 (54.04%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALL---------GDTP------TVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDI---ELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLXXE 784 S + ++NR+ SVKN +KITKAM+MVAA+KLR Q AE++R + F A++ DT T + ++V +++++GLCGG N+ K+++ K K + +G+K + +L R+ D+ + +TE+++ + Y +A DIL EFD I YSKF +VV+ +PT ++ E Sbjct: 3 SLKDLKNRISSVKNTRKITKAMQMVAAAKLRRAQEAAEDARPYAERFNAVMAGLAASVGQSDTAPKLLAGTGSDQVQLLVVMTAERGLCGGFNANIAKLARQKVLDLQAAGKTVKILTVGKKGRDVLKREF-GDLFVGHVDLTEVKR--VGYVDAQGIAKDILARFDAGEFDVATIFYSKFQNVVTQIPTAQQIIPAE 197
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_METPB (ATP synthase gamma chain OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=atpG PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.504e-17 Identity = 61/195 (31.28%), Postives = 97/195 (49.74%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLXXE 784 S + +RNR+ SVK QKITKAM+MVAA+KLR Q AEN R + ++L + + T + +++V + D+GL G NS+ ++++ K K + +G+K +L R + I P++Y + +ADDIL EFD + YS+F SV+S +PT ++ E Sbjct: 3 SLKDLRNRITSVKATQKITKAMQMVAAAKLRRAQNAAENGRPYAEKMASVLANLAGNLIGGVGAPRLLSGTGQDRVHLLVVCTGDRGLAGAFNSSIARLARDHANRLMAEGKTVKIMTVGKKGLDVLRRQFRDQIIASRDIRGNKPVDYPFAAEIADDILARFEAGEFDVATLFYSEFRSVISQIPTAQKIIPAE 197
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_PARDP (ATP synthase gamma chain OS=Paracoccus denitrificans (strain Pd 1222) GN=atpG PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.120e-16 Identity = 58/192 (30.21%), Postives = 100/192 (52.08%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDIL---KNVEFDALRIIYSKFHSVVSFLPTMATVL 775 S + ++NR+ SVKN +KITKAM+MVAA+KLR Q AE +R A++ T + +++++V ++S++GL GG NS+ VK+++ + K+ + +G+K + L R+ + + + Y +AD+IL N EFD + Y++F SV+S +PT V+ Sbjct: 3 SLKDLKNRIGSVKNTRKITKAMQMVAAAKLRRAQEAAEAARPYADRMAAVMAGLTAAAAGSDMAPRLLAGTGEDRRHLLVVMTSERGLAGGFNSSIVKLARLRLQELQAQGKQVSILTVGKKGREQLKREYGDLFVNHVDLSEVKRIGYDNARAIADEILDRFDNGEFDVATLFYNRFESVISQVPTARQVI 194
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_ERYLH (ATP synthase gamma chain OS=Erythrobacter litoralis (strain HTCC2594) GN=atpG PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.120e-16 Identity = 62/191 (32.46%), Postives = 101/191 (52.88%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTVDA------------------KKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDI-ELIITELQKNPLNYTQVSVLAD---DILKNVEFDALRIIYSKFHSVVSFLPT 760 S + +++R+ SVK+ QKITKA +MVAA+KLR Q AE +R P+ L D A +K+++V +++DKGLCGG+NS VK +K+ K K+ ++ ++G+K +A + RD +K I + T K P + + +A+ D+ + EFD ++Y F S + PT Sbjct: 3 SLKELKDRIGSVKSTQKITKAKQMVAAAKLRRAQANAEAAR----PYAERLADVMASLAGKVSGDSAPRLLAGSGNDQKHLLVVVNTDKGLCGGLNSNIVKEAKAQAKKLIAAGKDVQFYLVGKKGRAPIKRDYEKQIAKHFDTSTVKQP-GFEEADAIANELIDMFEAGEFDVAHLVYPTFKSALVQDPT 188
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_RHOS5 (ATP synthase gamma chain OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=atpG PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.769e-16 Identity = 59/192 (30.73%), Postives = 99/192 (51.56%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVL 775 S + ++NR+ SVKN +KITKAM+MVAA+KLR Q AE +R + TA++ T K ++V +++++GLCGG NS+ V+++++ K K + +G+K + L RD + + + + Y +A D+L EFD I +++F SV+S +PT V+ Sbjct: 3 SLKDLKNRIGSVKNTRKITKAMQMVAAAKLRRAQEAAEAARPFAERMTAVMTGLAGSVGSSESAPRLLAGTGSDKVQLLVVMTAERGLCGGFNSSIVRLARAHAAKLLAEGKTVKILTVGKKGREQLRRDLGQHFIGHVDLSEVKRMGYPVAQGIARDVLDRFDKGEFDVATIFFARFQSVISQIPTAQQVI 194 The following BLAST results are available for this feature:
BLAST of CK937611 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937611 ID=CK937611; Name=CK937611; organism=Citrus sinensis; type=EST; length=786bpback to top |