CK937611
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_AGRVS (ATP synthase gamma chain OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=atpG PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.168e-12 Identity = 58/193 (30.05%), Postives = 91/193 (47.15%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEK---------AKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPT 760 S + ++NR+ SVK QKITKAMKMVAA+KLR Q AE +R Q A+L + T T +++V ++++GLCGG NS + ++ + K K +G+K I+ R ++++ + E N V+ + EFD + YS+F SV+S +PT Sbjct: 3 SLKDLKNRIASVKATQKITKAMKMVAAAKLRRAQEAAEAARPYSQRMGAVLANIAQAVGSDDGVSTLMTGTGKDDVHLLVVCTAERGLCGGFNSQISRFARDHVRSLLAAGKTVKIYCVGKKGYDSLRREFGALIVERTEFREVKRVAFE------NADTVARKVISMFDKGEFDVCTLFYSEFKSVISQIPT 189
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_PROM9 (ATP synthase gamma chain OS=Prochlorococcus marinus (strain MIT 9312) GN=atpG PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.137e-12 Identity = 56/192 (29.17%), Postives = 98/192 (51.04%), Query Frame = 2 Query: 266 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLG-----------DTPTV---DAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKA--------KAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVL 775 +R+R+ SVKN +KIT+AM++VAA+K+R Q + SR +L D+P + D K +V I++D+GLCGG N+ +K + + E +++G+KA +++ + K++E + T + VLA+ + +N D + IIY+KF ++VS P + T+L Sbjct: 7 IRDRIVSVKNTRKITEAMRLVAAAKVRRAQDQVLKSRPFADKLARVLENIQSRVQFEAVDSPLLSKRDVKTISLVCITADRGLCGGYNTNIIKKVEIRYAELIKQGYEPNLILVGKKAIGYFQNRKDRYIIKTTFKELEQVPTAKDSEGIT---SEVLAEFLSENA--DRVEIIYTKFITLVSCAPVVQTLL 193
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_DICDI (ATP synthase subunit gamma, mitochondrial OS=Dictyostelium discoideum GN=atp5C1 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.137e-12 Identity = 52/188 (27.66%), Postives = 95/188 (50.53%), Query Frame = 2 Query: 230 APLGVRSIST-QIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTVDA------------KKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV-EFDALRIIYSKFHSVVSF 751 +P R+++T + ++ R+ +VK I K+TK + MVA+SKLR+ + KAE S +LG T DA K +++ I++D G+CG +N +K K+L L +E G K A +V D + + K ++ +V + ++I+ V +D+ ++Y+KF + +S+ Sbjct: 13 SPANQRNMATLKDLKIRLGTVKTISKLTKTLHMVASSKLRSAEKKAEESGPYSVGPQKVLGVVETADAFNTATEPIEDRSNKQLLIAITTDTGMCGPVNHQIIKTIKAL--LKDDAKQEILVSTTGLKGVAPIVADFPNQFLINGRDFGKADYSFPEVLLFLNEIISKVPNYDSALVVYNKFKNALSY 198
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_BARBK (ATP synthase gamma chain OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=atpG PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.137e-12 Identity = 55/192 (28.65%), Postives = 97/192 (50.52%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALL----GDTPTVDA----------KKNVIVTISSDKGLCGGINSTAVKISKS-LHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLAD---DILKNVEFDALRIIYSKFHSVVSFLPTMATVL 775 S + +R+R+ SVK QKITKAM+MVAA+KL Q E R Q AL+ D VDA +++V ++++GLCG N+ ++++ + KL++ K K + +G+K IL+RD K + + + + + + ++ D+ FD + YS+F SV++ P +++ Sbjct: 3 SLKDLRDRIASVKATQKITKAMQMVAAAKLHRAQEAVEAGRSYTQRMDALVTNISKDVDLVDAPLLMRGTGNDHVHLLVVCTAERGLCGAFNTQIARLAREHIQKLHAA-GKTVKILTVGKKGADILLRDFKSLMIDHVDLRSVKKIGFAEAAKISKQLIDLFNEGAFDVCTLFYSRFVSVITQRPMALSLI 193
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_ALKMQ (ATP synthase gamma chain OS=Alkaliphilus metalliredigens (strain QYMF) GN=atpG PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.137e-12 Identity = 51/194 (26.29%), Postives = 100/194 (51.55%), Query Frame = 2 Query: 251 ISTQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD-------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVI-LGEKAKAILVRDSKKDIELIITELQKNP--LNYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLXXE 784 + Q ++ R+KSV + ++ITKAM++V+++KLR ++K E +R ++ + D TP + KK + I++D+GL GG N+ +K + +N +KE +I +G+K + R D++ T++ +NP + + L ++ K D L ++Y++F S ++ P + +L E Sbjct: 3 VGMQDIKRRIKSVNSTKQITKAMELVSSAKLRKARLKLEKTRPYFKVVEETINDIVSSTQGIRHDLITPR-EVKKTAYIVITADRGLSGGYNANVIKAA-----VNHLQEKERVSIIAIGKKGRGFF-RKRGYDLDGEFTKISENPSFSDAQGIGKLGMELYKQELVDELYLVYTEFVSTITHKPRVVKLLPLE 189
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_TOBAC (ATP synthase gamma chain, chloroplastic OS=Nicotiana tabacum GN=ATPC PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.403e-12 Identity = 51/187 (27.27%), Postives = 93/187 (49.73%), Query Frame = 2 Query: 266 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD------TPTVD--------AKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILK---NVEFDALRIIYSKFHSVVSFLPTMATVL 775 +R+R++SVKN QKIT+AMK+VAA+K+R Q +R + +L + T +D KK +V ++ D+GLCGG N+ +K +++ + + + +G+K + +R ++ + N +ADD+ + E D + ++Y+KF S+V P + T+L Sbjct: 60 LRDRIESVKNTQKITEAMKLVAAAKVRRAQEAVVGARPFSETLVEVLYNINEQLQTDDIDVPLTKVRPVKKVALVVVTGDRGLCGGFNNYLIKKAEARIRDLKALGIDYTIISVGKKGNSYFIRRPYIPVDKFLE--GSNLPTAKDAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSEPVIHTLL 244
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_SYNY3 (ATP synthase gamma chain OS=Synechocystis sp. (strain PCC 6803) GN=atpG PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.403e-12 Identity = 51/186 (27.42%), Postives = 95/186 (51.08%), Query Frame = 2 Query: 266 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPT--------------VDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILK---NVEFDALRIIYSKFHSVVSFLPTMATV 772 +R+R++SVKN +KIT+AM++VAA+K+R Q + ++R +L + + K ++ ++ D+GLCGG N A+K ++ K K V++G KAK R D+ L++ P N ++ + +AD ++ + D + +IY++F S++S P + T+ Sbjct: 7 IRDRIQSVKNTKKITEAMRLVAAAKVRRAQEQVLSTRPFADALAQVLYNLQNRLSFAETELPLFEQREPKAVALLVVTGDRGLCGGYNVNAIKRAEQRAKELKNQGIAVKLVLVGSKAKQYFGR-RDYDVAASYANLEQIP-NASEAAQIADSLVALFVSETVDRVELIYTRFVSLISSQPVVQTL 190
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_RHOP5 (ATP synthase gamma chain OS=Rhodopseudomonas palustris (strain BisA53) GN=atpG PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.403e-12 Identity = 54/192 (28.12%), Postives = 90/192 (46.88%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTVDA---------------KKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVL 775 S + +R R+ S K QKITKAM+MVAASKLR Q+ AE +R + A++ + A + ++++ + ++GL G NS+ V++++ KE K +G K L R+ + I I L + +A ++ EFD + YS+F SV+S +PT ++ Sbjct: 3 SLKDMRVRIASTKATQKITKAMQMVAASKLRRAQLAAEAARPYAERMDAVISNIAGAAAGSPGAPVLLAGTGKDQVHLLLVCTGERGLSGAFNSSIVRLARERAFALMNQGKEVKIFCVGRKGYEQLRRNFDRQIVENIELRSVRQLGFVNAEDIAAKVIARFDAGEFDVCTLFYSRFKSVISQIPTAQQII 194
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_PROM5 (ATP synthase gamma chain OS=Prochlorococcus marinus (strain MIT 9515) GN=atpG PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.403e-12 Identity = 55/192 (28.65%), Postives = 99/192 (51.56%), Query Frame = 2 Query: 266 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLG-----------DTPTV---DAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKA--------KAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVL 775 +R+R+ SVKN +KIT+AM++VAA+K+R Q + SR +L D+P + + K +V I++D+GLCGG N+ +K + + E +++G+KA +++ + K++E + T + + VLA+ + +N D + IIY+KF ++VS P + T+L Sbjct: 7 IRDRIVSVKNTRKITEAMRLVAAAKVRRAQDQVLKSRPFADKLARVLENIQSRVQFEAVDSPLLSKREVKSISLVCITADRGLCGGYNTNIIKKVEIRYAELIKQGYEPNLILVGKKAIGYFQNRKDKYVIKSTFKELEQVPTAIDSEGITN---EVLAEFLSEN--SDRVEIIYTKFITLVSCAPVVQTLL 193
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_NOSP7 (ATP synthase gamma chain OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=atpG PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.403e-12 Identity = 52/187 (27.81%), Postives = 99/187 (52.94%), Query Frame = 2 Query: 266 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSR-----------GLWQPFTALLGDTPTV---DAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILK---NVEFDALRIIYSKFHSVVSFLPTMATVL 775 +R+R++SVKN +KIT+AM++VAA+++R Q + +R GL + P + + K ++ IS D+GLCGG N+ ++ +++ K ++V++G K+ R + I+ + L++ P + + +AD +L + E D + +IY++F S+VS P + T+L Sbjct: 7 IRDRIQSVKNTKKITEAMRLVAAARVRRAQEQVLATRPFADRLAQVLYGLQSRLRFEEANLPLLRKREVKSVGLLVISGDRGLCGGYNNNVIRRAENRAKEIKAEGLNYQFVLVGRKSTQYFQR-RDQPIDATYSGLEQIP-TAAEANQIADQLLSLFLSEEVDRIELIYTRFLSLVSSRPVVQTLL 191 The following BLAST results are available for this feature:
BLAST of CK937611 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937611 ID=CK937611; Name=CK937611; organism=Citrus sinensis; type=EST; length=786bpback to top |