CK937611
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_CAUSK (ATP synthase gamma chain OS=Caulobacter sp. (strain K31) GN=atpG PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.572e-11 Identity = 57/186 (30.65%), Postives = 89/186 (47.85%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD--------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPT 760 S + +RNR+ SVK QKITKAM+MVAA+KLR Q AE +R + A++ + T +++I+ ++D+GL GG S+ V+ ++ + K+ K V +G+K+ A L R I T +AD + + E D + + YS+F SVV PT Sbjct: 3 SLKEMRNRIASVKATQKITKAMQMVAAAKLRRSQDAAEAARPYARRLAAVIANLAAGVTGDGAPPMLAGTGRDDRHLIIVAAADRGLAGGFTSSIVRAARERIETLIAQGKDVKIVCIGKKSTAQLRRLYSDRIVEDFDLSAYRQFTLTVAQPIADVVTRLYEAGDVDVVTLFYSRFKSVVIQTPT 188
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_BART1 (ATP synthase gamma chain OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=atpG PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.572e-11 Identity = 55/189 (29.10%), Postives = 94/189 (49.74%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSR----GLWQPFTALLGDTPTVDAKK----------NVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNP---LNYTQVSVLAD---DILKNVEFDALRIIYSKFHSVVSFLPT 760 S + +R+R+ SVK QKITKAM+MVAA++L Q A+++R + T++ D VDA +++V ++++GLCG N + ++ K K K + +G+K IL RD K L+I + + + + + V++ D+ FD + YS+F SV++ PT Sbjct: 3 SLKDLRDRIASVKATQKITKAMQMVAAARLHRAQEAAQSARPYAKRMADILTSVAADVDGVDAPALMRGTGRDDVHLLVVCTAERGLCGAFNVQIARRAREQIKALLAAGKIVKIITVGKKGADILSRDYK---SLMIDHIDLHAVKRIGFAEALVISQRIVDLFNEGAFDVCTLFYSEFVSVINQRPT 188
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_VIBPA (ATP synthase gamma chain OS=Vibrio parahaemolyticus GN=atpG PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.053e-11 Identity = 54/186 (29.03%), Postives = 93/186 (50.00%), Query Frame = 2 Query: 266 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTV------------DAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDK--ENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILK--NVEFDALRIIYSKFHSVVSFLPTMATVL 775 +RN++ SVK+ QKITKAM+MVAASK+R Q E SR + ++G +AK+ + +S+D+GLCGG+N K K++ + + +K E + ++G KA A K + ++ L +P + + + K E D L ++++KF + + PT+ +L Sbjct: 7 IRNKIGSVKSTQKITKAMEMVAASKMRRSQDAMEASRPYAETMRKVIGHVANANLEYRHPYLEEREAKRVGYIIVSTDRGLCGGLNINVFK--KAVTDIQTWKEKGAEIELAVIGSKATAFFKHGGAK-VAAQVSGLGDSPSLEDLIGSVGVMLKKYDEGELDRLYVVFNKFVNTMVQQPTIDQLL 189
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_SYNS3 (ATP synthase gamma chain OS=Synechococcus sp. (strain CC9311) GN=atpG PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.053e-11 Identity = 56/189 (29.63%), Postives = 94/189 (49.74%), Query Frame = 2 Query: 266 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALL-----------GDTPTVDAKKNVIVT---ISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVEF-----DALRIIYSKFHSVVSFLPTMATVL 775 +R+R+KSVKN +KIT+AM++VAA+K+R Q + SR LL D P ++ + +T ++ D+GLCGG NS +K ++ + V++G KA + + I+ T L++ P + +A +I EF D + II++KF ++VS P + T+L Sbjct: 7 IRDRIKSVKNTRKITEAMRLVAAAKVRRAQEQVLRSRPFADRLARLLENLQARMRFEDADAPLLEQRAVQTITLMAVTGDRGLCGGYNSNIIKRTEKRFAELQRQGYKVALVLIGRKAISYFT-NRNYPIQATFTGLEQVP-TADEAGSIASEIF--AEFLSETSDRVEIIFTKFINLVSCKPVVQTLL 191
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_RICFE (ATP synthase gamma chain OS=Rickettsia felis GN=atpG PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.053e-11 Identity = 53/191 (27.75%), Postives = 94/191 (49.21%), Query Frame = 2 Query: 266 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTVDA----------------KKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQK--NPLNYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLXXE 784 +R R+KSVK+ QKITKAM++V+ASK+ I+ + NS + + ++ D ++D K N+++ ++S +GLCG N + +K K+ K ++ K +I+G+K L R I+ EL K + QV ++N+E I ++KF + ++ + T +L E Sbjct: 7 LRTRIKSVKSTQKITKAMQLVSASKMAKIKSQIANSNFYIEAISKMMSDILSIDMYELSIEEQKFFNTIPNKANLLIVMASQRGLCGTFNYSIIKQVKNDIKELENKGEQIKLIIIGKKGYEALKRQYANYIDSYF-ELPKIHDENLMLQVKQKIMSAVENLEVSNCVIYFNKFKNAMTQIMTRQQILPIE 196
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_RALEH (ATP synthase gamma chain OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=atpG PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.053e-11 Identity = 51/189 (26.98%), Postives = 92/189 (48.68%), Query Frame = 2 Query: 257 TQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTV------------DAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELII----TELQKNPLNYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVL 775 T+ +R ++KSV+N +KITKAM+MVAASK+R Q + ++R + + T + K+ ++ +++DKGLCGG+N+ ++ + K G + + +G K L R K I ++ T + + +V + D N E DA+ + Y+KF + + P + +L Sbjct: 4 TKEIRTKIKSVQNTRKITKAMEMVAASKMRKAQERMRSARPYAEKVRNIAAHLATANPEFKHPFMQEREVKRVGMIVVTTDKGLCGGLNTNVLRAVTNELKTLQGRGVDVQATAIGTKGMQFLGRVGAKVISHVVHLGDTPHLEKLIGAIKVQL---DAFTNGEVDAVYLAYTKFINTMKQEPMVEQLL 189
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_DESAP (ATP synthase gamma chain OS=Desulforudis audaxviator (strain MP104C) GN=atpG PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.053e-11 Identity = 58/189 (30.69%), Postives = 95/189 (50.26%), Query Frame = 2 Query: 269 RNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTV------------DAKKNVIVTISSDKGLCGGINSTAVKIS-KSLHKLNSGPDKENKYVILGEKAKAIL-VRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLXXE 784 R R+KSVK+ QKI KAMK VA +K+ Q +R + +LG + + K+ + I++D+GLCGG NS ++ + K L K +E K V +G K + RD ++D E I L +N + + Q +A ++ E+DA+ ++YSKF +++ PT+ +L E Sbjct: 8 RRRIKSVKSTQKICKAMKAVATAKMARAQATVVAARPYARQLHEVLGRVASAARDVQNPLLTVREPKRVCYIVITADRGLCGGFNSNILRTAVKELSKW-----EEFKLVAVGRKCRNFFRFRDWERDAEFI--GLGEN-IRFEQGQQIARFVINKYIAGEYDAVYMVYSKFVNMLVQQPTVVKLLPVE 188
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_AERHH (ATP synthase gamma chain OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=atpG PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.053e-11 Identity = 55/187 (29.41%), Postives = 89/187 (47.59%), Query Frame = 2 Query: 266 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTP------------TVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNP-----LNYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVL 775 +RN++ SVKN QKIT AM+MVAASK+R Q + SR + ++G + K+ + +S+D+GLCGG+N K + + K S + ++G KA R K ++ + L NP + +V + A D N E D L ++Y+KF + + P + +L Sbjct: 7 IRNKIGSVKNTQKITGAMEMVAASKMRRAQDRMSASRPYAETMRKVIGHIAQGNLEYKHPYLIEREVKRVGYIVVSTDRGLCGGLNINLFKAALNDMKQWSAKGAKVDLALIGNKASNFFERHGAK-VKAHVAGLGDNPSVNDLIGSVKVMLKAYD---NGEIDRLYLVYNKFVNTMVQQPRVDQLL 189
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG2_ARATH (ATP synthase gamma chain 2, chloroplastic OS=Arabidopsis thaliana GN=ATPC2 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.053e-11 Identity = 62/219 (28.31%), Postives = 105/219 (47.95%), Query Frame = 2 Query: 176 ISPRPIAAIRSPFLSEEDAPLGVRSISTQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALL------GDTPTVD--------AKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVIL--GEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILK---NVEFDALRIIYSKFHSVVSFLPTMATVL 775 ++P I++ RSP S + G+R + R R+ SVKN QKIT+AM++VAA+++R Q R + +L +D K+ +V ++ DKGLCGG N+ K K+ ++ + V++ G+K A R + D++ I P + V+ADD+ + E D + ++Y+KF S+V P + T+L Sbjct: 43 LTPNRISS-RSPLPSIQ-IRAGIREL-----RERIDSVKNTQKITEAMRLVAAARVRRAQDAVIKGRPFTETLVEILYSINQSAQLEDIDFPLSIVRPVKRVALVVVTGDKGLCGGFNNAVTK--KATLRVQELKQRGIDCVVISVGKKGNAYFSRRDEFDVDKCIEGGGVFPTT-KEAQVIADDVFSLFVSEEVDKVELVYTKFVSLVKSDPVIHTLL 251
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_DESOH (ATP synthase gamma chain OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=atpG PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.682e-11 Identity = 56/193 (29.02%), Postives = 90/193 (46.63%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD-------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAK--AILVRDSKKDIELIITELQKNPLNYTQVSVLADDIL----KNVEFDALRIIYSKFHSVVSFLPTMATVL 775 S + V+ ++K VK +KITKAM MVA SKLR Q E R + F +LG P K+ +V +SD+GLCGG N+ V+++ + K + E + G+K + + D ++ E + + N V+V A L N ++D + +IYS+F + LP + +L Sbjct: 3 SLKEVQLKIKGVKQTKKITKAMNMVATSKLRGAQTNMEAFRPYAEKFAEVLGSLAAKAGEETSPLLVPKESVKRVNVVLCTSDRGLCGGFNTNLVRMANAYLKRCQEKEIEVSFTHFGKKGRDWCRKMTDCERKSEYLGVVGARFGFN---VAVTAGRELINGFLNGDYDEVHVIYSEFQGMAKQLPVIRQLL 192 The following BLAST results are available for this feature:
BLAST of CK937611 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937611 ID=CK937611; Name=CK937611; organism=Citrus sinensis; type=EST; length=786bpback to top |