CK937611
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_PELUB (ATP synthase gamma chain OS=Pelagibacter ubique GN=atpG PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.769e-16 Identity = 58/182 (31.87%), Postives = 92/182 (50.55%), Query Frame = 2 Query: 266 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLP 757 ++ R+ SVK+ QKITKAMKMVAA+KLR Q AE R + ++ + + T + K ++ + ++SD+GLCGG N+ +K +K+ + S K K + +G K L R K I I+ +NY + I++N EFD I Y+KF +V++ +P Sbjct: 7 LKKRIASVKSTQKITKAMKMVAAAKLRRAQENAEKGRPYSEKMNNIILNLSSGISDKENAPKLLSGTGEDKVHLCIVLTSDRGLCGGFNTNIIKKAKTYFQKISDEGKTLKIITVGSKGYDQLKRVYKDAIVERISFKDSKTINYLDAEKVGKMIIENFEKEEFDVCTIFYNKFKNVITQIP 188
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_PARL1 (ATP synthase gamma chain OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=atpG PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.769e-16 Identity = 63/187 (33.69%), Postives = 95/187 (50.80%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALL----------GDTPTVDA-----KKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQ---VSVLADDILKNVEFDALRIIYSKFHSVVSFLPT 760 S + +RNR+ SVK QKITKAM+MVAA+KLR Q AE +R + +L D P + A + ++++ ++D+GLCGG NS+ V++++ G K K + +G K + L RD I + + Q +S D+ + EFD I YSKF +VVS +PT Sbjct: 3 SLKDLRNRIASVKATQKITKAMQMVAAAKLRRAQEAAEAARPYAERMDRVLANLATGMTGRSDAPALLAGTGSDQVHLVIVATADRGLCGGFNSSIVRLARQHINKLVGEGKTVKILTVGRKGRDALKRDHASRIVKSYEFTGIRHIGFEQAEDISRTVIDLFEAGEFDVATIFYSKFVNVVSQIPT 189
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_RHORU (ATP synthase gamma chain OS=Rhodospirillum rubrum GN=atpG PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.616e-16 Identity = 60/192 (31.25%), Postives = 101/192 (52.60%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTVDA-------------KKNV--IVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYT---QVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVL 775 S + +R+R+ SVK+ QKIT AMKMVAAS+LR Q AE +R Q +LG+ A K NV IV +++++GLCGG N + ++ +++L + K K + +G+K + L R+ K I I + + ++ + S L D+ + EFD ++Y++F S +S + T ++ Sbjct: 3 SLKDLRSRITSVKSTQKITSAMKMVAASRLRRAQDTAEAARPYTQRMERMLGNLAASTAGMAGASPLLGGTGKDNVHLIVALTANRGLCGGFNGSIIRATRTLVRELEAQGKTVKLLCIGKKGRDGLKREFPKQIIGGIADQSSKAIGFSDADRFSRLILDMFQAGEFDVCTLVYNRFQSAISQVVTRQQII 194
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_RHORT (ATP synthase gamma chain OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=atpG PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.616e-16 Identity = 60/192 (31.25%), Postives = 101/192 (52.60%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTVDA-------------KKNV--IVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYT---QVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVL 775 S + +R+R+ SVK+ QKIT AMKMVAAS+LR Q AE +R Q +LG+ A K NV IV +++++GLCGG N + ++ +++L + K K + +G+K + L R+ K I I + + ++ + S L D+ + EFD ++Y++F S +S + T ++ Sbjct: 3 SLKDLRSRITSVKSTQKITSAMKMVAASRLRRAQDTAEAARPYTQRMERMLGNLAASTAGMAGASPLLGGTGKDNVHLIVALTANRGLCGGFNGSIIRATRTLVRELEAQGKTVKLLCIGKKGRDGLKREFPKQIIGGIADQSSKAIGFSDADRFSRLILDMFQAGEFDVCTLVYNRFQSAISQVVTRQQII 194
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_JANSC (ATP synthase gamma chain OS=Jannaschia sp. (strain CCS1) GN=atpG PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.616e-16 Identity = 56/188 (29.79%), Postives = 96/188 (51.06%), Query Frame = 2 Query: 266 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTVDAKK---------------NVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVL 775 ++NR+ SVK+ +KITKAM+MVAA+KLR Q AE +R + A++ + +++V +++++GLCGG NST V+ ++ + G K K + +G+K + L RD + + L Y + +A D+L EFD I +++F SV+S +PT ++ Sbjct: 7 LKNRIASVKSTRKITKAMQMVAAAKLRRAQEAAEMARPYAEKMEAVMSGLASAVGNSEGAPRLLAGNGKDQVHLLVVMTAERGLCGGFNSTIVRKARVHAQKLLGEGKTIKILTVGKKGREQLRRDYADHLIGHVDLSDVKRLGYADAASIATDVLNRFEEDEFDVATIFFNRFESVISQIPTATQII 194
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_AZOC5 (ATP synthase gamma chain OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=atpG PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.616e-16 Identity = 61/192 (31.77%), Postives = 97/192 (50.52%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLG----------DTP-----TVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVL 775 S + +RNR+ SVK QKITKAM+MVAA+KLR Q+ AE +R + ++LG DTP T +K++++ +S++GLCG N+ V+ + L G K+ K+ +G K L R I ++ L + +A+ I+ EFD + +S F SV+S +PT ++ Sbjct: 3 SLKDLRNRIASVKATQKITKAMQMVAAAKLRRAQMAAEAARPYAERMDSVLGNIASGVTLSADTPLLLSGTGKDEKHLLLVCTSERGLCGAFNTNIVRAVRERANLLIGQGKDVKFFCVGRKGYDQLRRLYPGQIVELVDLRSVRNLGFVNAHDIAEKIIDRFNKGEFDVCTLFFSHFKSVISQVPTAQQII 194
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_SILPO (ATP synthase gamma chain OS=Silicibacter pomeroyi GN=atpG PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.168e-16 Identity = 57/188 (30.32%), Postives = 95/188 (50.53%), Query Frame = 2 Query: 266 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTP---------------TVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVL 775 ++NR+ SVK+ +KITKAM+MVAA+KLR Q AE +R + F A++ T + +++V +++++GLCGG NS K+++ K K + +G+K + + RD ++ + L Y +A D+L EFD I Y+KF +VV+ LPT ++ Sbjct: 7 LKNRIASVKSTRKITKAMQMVAAAKLRRAQESAEAARPYAERFNAVMAGLAASVGGSDSAPLLLRGTGSDQVHLLVVMTAERGLCGGFNSNIAKLARVRANELLAKGKTVKILTVGKKGRDAMKRDFAANMVGHVDLSGIKALGYANAQDIARDVLGRFDAGEFDVATIFYAKFQNVVTQLPTAQQII 194
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_RHOSK (ATP synthase gamma chain OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=atpG PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.168e-16 Identity = 59/192 (30.73%), Postives = 100/192 (52.08%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVL 775 S + ++NR+ SVKN +KITKAM+MVAA+KLR Q AE +R + TA++ T K +++V +++++GLCGG NS+ V+++++ K K + +G+K + L RD + + + + Y +A D+L EFD I +++F SV+S +PT V+ Sbjct: 3 SLKDLKNRIGSVKNTRKITKAMQMVAAAKLRRAQEAAEAARPFAERMTAVMTGLAGSVGSSESAPRLLAGTGSDKVHLLVVMTAERGLCGGFNSSIVRLARAHAAKLLTQGKTVKILTVGKKGREQLRRDLGQHFIGHVDLSEVKRMGYPVAQGIARDLLDRFDKGEFDVATIFFARFQSVISQVPTAQQVI 194
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_RHOS1 (ATP synthase gamma chain OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=atpG PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.168e-16 Identity = 59/192 (30.73%), Postives = 100/192 (52.08%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVL 775 S + ++NR+ SVKN +KITKAM+MVAA+KLR Q AE +R + TA++ T K +++V +++++GLCGG NS+ V+++++ K K + +G+K + L RD + + + + Y +A D+L EFD I +++F SV+S +PT V+ Sbjct: 3 SLKDLKNRIGSVKNTRKITKAMQMVAAAKLRRAQEAAEAARPFAERMTAVMTGLAGSVGSSESAPRLLAGTGSDKVHLLVVMTAERGLCGGFNSSIVRLARAHAAKLLTQGKTVKILTVGKKGREQLRRDLGQHFIGHVDLSEVKRMGYPVAQGIARDLLDRFDKGEFDVATIFFARFQSVISQVPTAQQVI 194
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_XANP2 (ATP synthase gamma chain OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=atpG PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.052e-15 Identity = 57/192 (29.69%), Postives = 98/192 (51.04%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVL 775 S + +RNR+ SVK QKITKAM+MVAA+KLR Q+ AE +R + +LG+ T ++K++++ + ++GLCG N++ V++++ + G K+ + +G K L R I ++ L++ S +A IL ++ FD + YS F SV+S +PT ++ Sbjct: 3 SLKDLRNRIASVKATQKITKAMQMVAAAKLRRAQMAAEAARPYAERMDTVLGNLAAGIVGAGQAPVLIAGTGQSQKHLLLVCTGERGLCGAFNTSIVRLAREKAQQLIGEGKDVTFFCVGRKGYDQLRRTYPDRIIELVDLRSVRTLSFKNASDIASKILTLLDQGAFDVCTLFYSNFKSVISQIPTAQQII 194 The following BLAST results are available for this feature:
BLAST of CK937611 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937611 ID=CK937611; Name=CK937611; organism=Citrus sinensis; type=EST; length=786bpback to top |