CK937611
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_RHILO (ATP synthase gamma chain OS=Rhizobium loti GN=atpG PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.052e-15 Identity = 62/192 (32.29%), Postives = 97/192 (50.52%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALL----------GDTP---TVDAKKNV--IVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDIL---KNVEFDALRIIYSKFHSVVSFLPTMATVL 775 S + +RNR+ SVK QKITKAM+MVAA+KLR Q AE +R + ++L GD P T K NV +V ++++GLCGG NS ++++ + K+ K + +G+K IL RD I + + L + +A ++ FD + YS+F SV+S +PT ++ Sbjct: 3 SLKDLRNRIASVKATQKITKAMQMVAAAKLRRAQEAAEAARPYSERMGSVLANITQAIGGGGDAPALMTGTGKDNVHLLVVCTAERGLCGGFNSQIARLARDHIRRLLADGKQVKIICVGKKGFDILRRDYASMILDRVDLREVKTLGFVNADAIAKKVIHLFNEGAFDICTLFYSQFKSVISQVPTAQQII 194
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_RHOS4 (ATP synthase gamma chain OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=atpG PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.374e-15 Identity = 58/192 (30.21%), Postives = 100/192 (52.08%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVL 775 S + ++NR+ SVKN +KITKAM+MVAA+KLR Q AE +R + TA++ T K +++V +++++GLCGG NS+ V+++++ K K + +G+K + L RD + + + + Y +A D+L EFD I +++F SV++ +PT V+ Sbjct: 3 SLKDLKNRIGSVKNTRKITKAMQMVAAAKLRRAQEAAEAARPFAERMTAVMTGLAGSVGSSESAPRLLAGTGSDKVHLLVVMTAERGLCGGFNSSIVRLARAHAAKLLTQGKTVKILTVGKKGREQLRRDLGQHFIGHVDLSEVKRMGYPVAQGIARDLLDRFDKGEFDVATIFFARFQSVINQVPTAQQVI 194
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_PHEZH (ATP synthase gamma chain OS=Phenylobacterium zucineum (strain HLK1) GN=atpG PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.374e-15 Identity = 61/194 (31.44%), Postives = 102/194 (52.58%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD--------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIIT-ELQKNP--LNYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLXXE 784 S + +RNR+ SVK QKITKAM+MVAA+KLR Q A+N+R Q +++ + T +++++V +SD+GL GG NS V+ ++ S K+ + + +G KA+ L R + + L+ T E NP +VS ++ + E D + +++S F SVV+ PT+ ++ E Sbjct: 3 SLKEMRNRIGSVKATQKITKAMQMVAAAKLRKAQDAAQNARPYAQRMASVIANLAAGVSGDGAPKLLAGTGSDRRHLVVVATSDRGLAGGFNSAIVRAARERINALSAEGKDVRVITIGRKARDQLRRLAGE--RLVATYEAGSNPSLAVAEEVSARIQEMFEAGEVDVVHLVFSSFKSVVTQQPTVRQLIPAE 194
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_RHOBL (ATP synthase gamma chain OS=Rhodopseudomonas blastica GN=atpG PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.795e-15 Identity = 58/190 (30.53%), Postives = 98/190 (51.58%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTVDA-------------KKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDIL---KNVEFDALRIIYSKFHSVVSFLPTMATVL 775 S + ++NR+ SVKN +KITKAM+MVAA+KLR Q AE +R + A++ + + +++V ++S++GLCGG NST V++++ K K + +G+K + L RD + L Y+ +A ++L + E D + I Y++F SV+S +PT V+ Sbjct: 3 SLKDLKNRIGSVKNTRKITKAMQMVAAAKLRRAQDSAEAARPYAERMGAVIASLASGQGAGAPRLLAGNGRDQIHLLVVMTSERGLCGGFNSTIVRLARQRANELVAQGKTVKILTVGKKGREQLKRDWASAFVGHVDLSDVRRLGYSNAQGIAREVLAAFEAGEADVVTIFYNRFQSVISQVPTAQQVI 192
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_BRUC2 (ATP synthase gamma chain OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=atpG PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.795e-15 Identity = 62/186 (33.33%), Postives = 94/186 (50.54%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLG---------DTPTV---DAKKNV--IVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPT 760 S + +RNR+ SVK QKITKAM+MVAA+KLR Q AE +R Q A+L D P + K NV +V ++++GLCGG NS ++++ + K K + +G+K IL R+ + + + L + + I+K E FD + YS+F SV+S +PT Sbjct: 3 SLKDLRNRIASVKATQKITKAMQMVAAAKLRRAQEAAEAARPYSQRMGAVLANIAQNVSGEDAPALMVGTGKDNVHLLVVCTAERGLCGGFNSQIARLARDHARKLLAEGKTVKIITVGKKGADILRREFSALLHDHVDLREVKQLAFVHADQIGHKIIKLFEEGAFDVCTLFYSEFKSVISQVPT 188
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_AGRT5 (ATP synthase gamma chain OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=atpG PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.795e-15 Identity = 61/192 (31.77%), Postives = 96/192 (50.00%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD--------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEK---------AKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPT 760 S + ++NR+ SVK QKITKAMKMVAA+KLR Q AE +R Q +A+L + T T +++V ++++GLCGG NS + ++ + K K + +G+K A I+ R +D++ + E N Q++ + EFD +IYS+F SV+S +PT Sbjct: 3 SLKDLKNRIASVKATQKITKAMKMVAAAKLRRAQEAAEAARPYSQRMSAVLANIATAVEADVAPALMTGTGKDDVHLLVVCTAERGLCGGFNSQIARFARDQARKLISEGKTVKIITVGKKGYDSLRREFASLIIERIELRDVKKVGFE------NADQIAKKVISLFNAGEFDVCTLIYSEFKSVISQIPT 188
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_ACICJ (ATP synthase gamma chain OS=Acidiphilium cryptum (strain JF-5) GN=atpG PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.061e-15 Identity = 54/187 (28.88%), Postives = 99/187 (52.94%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLG-------DTPTVDA--------KKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDIL---KNVEFDALRIIYSKFHSVVSFLPT 760 S + +RNR+ SVK+ QKITKAMKMVAA+KLR Q +AE +R A++G + P A + ++IV +S+D+GL G N++ + +++ + K+ + +G K + RD ++ I + K + + +A+ I+ + +FD +++++F SV+S +P+ Sbjct: 3 SLKALRNRIASVKSTQKITKAMKMVAAAKLRRAQAQAEAARPYATRMAAMMGALAEGAAENPNAPALLVGNGADRTHLIVVVSADRGLAGPFNASINRAARARARKLEAEGKQVRLFTVGRKGRDFFRRDMREKIIGEANFVGKKTIEFADAEAIANQIIAAFNDGKFDVCTLMFNRFVSVMSQVPS 189
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_DROME (ATP synthase subunit gamma, mitochondrial OS=Drosophila melanogaster GN=ATPsyn-gamma PE=2 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 3.998e-15 Identity = 54/170 (31.76%), Postives = 101/170 (59.41%), Query Frame = 2 Query: 260 QIVRNRMKSVKNIQKITKAMKMVAASKLRAIQ--VKAENSRGLW-QPFTALLGDTPTVDAK-KNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKEN-KYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILK-NVEFDALRIIYSKFHSVVSF 751 +++ R+KSVKNIQKIT++MKMV+A+K + +KA G+ Q F P A+ K +++ ++SD+GLCG +++ ++ + D+ N K +G+K++AIL R K+I ++ E+ + P + S +A+++L+ ++ +I+Y++F SVVS+ Sbjct: 30 KMISIRLKSVKNIQKITQSMKMVSAAKYARAERDLKAARPYGIGAQQFFEKTEIQPDEKAEPKKLLIAVTSDRGLCGAVHTGVARLIRG----ELAQDEANTKVFCVGDKSRAILSRLYGKNILMVANEVGRLPPTFLDASKIANEVLQTGYDYTEGKIVYNRFKSVVSY 195
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_SINMW (ATP synthase gamma chain OS=Sinorhizobium medicae (strain WSM419) GN=atpG PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.222e-15 Identity = 61/187 (32.62%), Postives = 96/187 (51.34%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDI--ELIITELQKNPL-NYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPT 760 S + ++NR+ SVK QKITKAMKMVAA+KLR Q AE +R Q A+L + T T +++V ++++GLCGG NS + ++ + K K + +G+K IL R+ I + + E++K N ++ ++ N EFD + YS+F SV+S +PT Sbjct: 3 SLKDLKNRIASVKATQKITKAMKMVAAAKLRRAQEAAEAARPYSQRMAAVLSNIAQAVGADDSAPRLMTGTGKDDTHLLVVCTAERGLCGGFNSQIARHARDHVRKLLAQGKTVKIICVGKKGFDILRREFASLIIDRVDLREVKKIGFENADRIGHKVIELFDNGEFDVCTLFYSEFKSVISQIPT 189
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_MESSB (ATP synthase gamma chain OS=Mesorhizobium sp. (strain BNC1) GN=atpG PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.222e-15 Identity = 58/191 (30.37%), Postives = 98/191 (51.31%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALL---------GDTPTVDA-----KKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDIL---KNVEFDALRIIYSKFHSVVSFLPTMATVL 775 S + +RNR+ SVK QKITKAM+MVAA+KLR Q AE +R + A+L D P + A +++V ++D+GL G NS ++++ + ++ K + +G+K +L RD K + I + + + +A ++ + EFD +IYS+F SV+S +PT ++ Sbjct: 3 SLKDLRNRIASVKATQKITKAMQMVAAAKLRRAQEAAEAARPYAERMDAVLANVSASISGADAPPLMAGTGKDDVHLVVVCTADRGLAGSFNSQIARLAREHIRKLQANGRQVKIITVGKKGYDLLRRDFGKLVIDRIELREVKQIGFANADAIAKKVIGLFEAGEFDVCTLIYSRFKSVISQIPTEQQII 193 The following BLAST results are available for this feature:
BLAST of CK937611 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937611 ID=CK937611; Name=CK937611; organism=Citrus sinensis; type=EST; length=786bpback to top |