CK937611
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_GRABC (ATP synthase gamma chain OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=atpG PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.222e-15 Identity = 62/186 (33.33%), Postives = 91/186 (48.92%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSR---GLWQPFTALLGD------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLP 757 S + +R R+ SVK+ QKIT AMKMVAASKLR Q AE +R L Q A L D T K +++V IS+D+GL G N+ + +++L K K + +G KA+ L RD + + + K L + L+ I + EFD ++Y+ F+SV+S P Sbjct: 3 SLKALRGRITSVKSTQKITSAMKMVAASKLRRAQQAAEAARPYAELMQRMLAALADNVAGSPSAPRILVGTGQDKVHLLVVISADRGLAGAFNTNVGRAARTLANRLESEGKTVKILTVGRKARDYLRRDLETRLLPETSLAGKKVLAFADALALSQQITARLDAGEFDVCTLVYNHFNSVISQTP 188
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_OCHA4 (ATP synthase gamma chain OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=atpG PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.820e-15 Identity = 59/191 (30.89%), Postives = 97/191 (50.79%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLG---------DTPTVDA-----KKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYT---QVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVL 775 S + +RNR+ SVK QKITKAM+MVAA+KLR Q AE +R Q A+L D P + A +++V ++++GLCGG NS ++++ + K K + +G+K IL R+ I + + L + Q+ ++ + EFD + YS+F SV++ +PT ++ Sbjct: 3 SLKDLRNRIASVKATQKITKAMQMVAAAKLRRAQEAAEAARPYSQRMGAVLANIAQNVTGEDAPALMAGTGKDDVHLLVVCTAERGLCGGFNSQIARLARDHARKLLAEGKTVKIITVGKKGADILRREFASLIIDHVNLREVKQLAFVHADQIGHKVIELFEQGEFDVCTLFYSEFKSVIAQIPTAQQII 193
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_BRUSU (ATP synthase gamma chain OS=Brucella suis GN=atpG PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.820e-15 Identity = 60/186 (32.26%), Postives = 93/186 (50.00%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLG---------DTP-----TVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPT 760 S + +RNR+ SVK QKITKAM+MVAA+KLR Q AE +R Q A+L D P T +++V ++++GLCGG NS ++++ + K K + +G+K IL R+ + + + L + + I+K E FD + YS+F SV+S +PT Sbjct: 3 SLKDLRNRIASVKATQKITKAMQMVAAAKLRRAQEAAEAARPYSQRMGAVLANIAQNVSGEDAPALMVGTGKDDVHLLVVCTAERGLCGGFNSQIARLARDHARKLLAEGKTVKIITVGKKGADILRREFSALLHDHVDLREVKQLAFVHADQIGHKIIKLFEEGAFDVCTLFYSEFKSVISQVPT 188
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_BRUSI (ATP synthase gamma chain OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=atpG PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.820e-15 Identity = 60/186 (32.26%), Postives = 93/186 (50.00%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLG---------DTP-----TVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPT 760 S + +RNR+ SVK QKITKAM+MVAA+KLR Q AE +R Q A+L D P T +++V ++++GLCGG NS ++++ + K K + +G+K IL R+ + + + L + + I+K E FD + YS+F SV+S +PT Sbjct: 3 SLKDLRNRIASVKATQKITKAMQMVAAAKLRRAQEAAEAARPYSQRMGAVLANIAQNVSGEDAPALMVGTGKDDVHLLVVCTAERGLCGGFNSQIARLARDHARKLLAEGKTVKIITVGKKGADILRREFSALLHDHVDLREVKQLAFVHADQIGHKIIKLFEEGAFDVCTLFYSEFKSVISQVPT 188
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_BRUO2 (ATP synthase gamma chain OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=atpG PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.820e-15 Identity = 60/186 (32.26%), Postives = 93/186 (50.00%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLG---------DTP-----TVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPT 760 S + +RNR+ SVK QKITKAM+MVAA+KLR Q AE +R Q A+L D P T +++V ++++GLCGG NS ++++ + K K + +G+K IL R+ + + + L + + I+K E FD + YS+F SV+S +PT Sbjct: 3 SLKDLRNRIASVKATQKITKAMQMVAAAKLRRAQEAAEAARPYSQRMGAVLANIAQNVSGEDAPALMVGTGKDDVHLLVVCTAERGLCGGFNSQIARLARDHARKLLAEGKTVKIITVGKKGADILRREFSALLHDHVDLREVKQLAFVHADQIGHKIIKLFEEGAFDVCTLFYSEFKSVISQVPT 188
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_BEII9 (ATP synthase gamma chain OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=atpG PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.820e-15 Identity = 54/187 (28.88%), Postives = 97/187 (51.87%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTV-----DAKK----------NVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDIL---KNVEFDALRIIYSKFHSVVSFLPT 760 S + +RNR+ SVK QKITKAM+MVA++KLR Q+ AE +R + +L ++ DA K +++V ++++GLCGG N++ ++++ + K+ K + +G+K +L R + I +I + + + IL K+ EFD + ++KF +V+ +PT Sbjct: 3 SLKDLRNRIASVKATQKITKAMQMVASAKLRRAQLAAEAARPYAERMDEVLASLASIVGTGPDAPKLLAGNGYDRTHLLVVCTAERGLCGGFNASIARLARDTAEKLIAEGKKVKILCVGKKGYDLLKRQFGEQILELIELRSVRTIGFVNAEAIGRKILNLYKDAEFDVCTLFFAKFRTVLHQIPT 189
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_RHISN (ATP synthase gamma chain OS=Rhizobium sp. (strain NGR234) GN=atpG PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 8.907e-15 Identity = 60/187 (32.09%), Postives = 96/187 (51.34%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDI--ELIITELQKNPL-NYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPT 760 S + ++NR+ SVK QKITKAMKMVAA+KLR Q AE +R Q A+L + T T +++V ++++GLCGG NS + ++ + K K + +G+K IL R+ I + + E++K N ++ ++ + EFD + YS+F SV+S +PT Sbjct: 3 SLKDLKNRIASVKATQKITKAMKMVAAAKLRRAQEAAEAARPYSQRMAAVLANIAQAVGADDSAPALMTGTGRDNTHLLVVCTAERGLCGGFNSQIARFARDHVRKLLAQGKTVKIICVGKKGFDILRREFASLIIDRVDLREVKKIGFENADRIGHKVIELFEKGEFDVCTLFYSEFKSVISQVPT 189
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_BDEBA (ATP synthase gamma chain OS=Bdellovibrio bacteriovorus GN=atpG PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 8.907e-15 Identity = 55/189 (29.10%), Postives = 102/189 (53.97%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDT--------PTVDAKKNV----IVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVL 775 S + +R +++S KN Q+ITKAMK+V+A+KLR Q N R ++ D P ++ K+ V +V I+SD+GLCG NS K +++ + N ++ ++ +G + R K ++ IT+L K+ ++Y S +A+ ++ + +D +RI++++F S +S + T T+L Sbjct: 3 SLKDIRAQIESTKNTQQITKAMKLVSAAKLRKAQNNIVNMRPYALALRQVIADIAVTNKVSHPLMEKKEQVKNVLLVVITSDRGLCGAFNSNINKFAEAYYNSNKASLEKIDFLFVGRRGHDYFARRGIKAVD-YITKLDKD-ISYELASKVANRVMNDYLEGSYDEVRIVHNEFKSAISQVVTAETLL 189
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_SYNE7 (ATP synthase gamma chain OS=Synechococcus elongatus (strain PCC 7942) GN=atpG PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.163e-14 Identity = 57/187 (30.48%), Postives = 103/187 (55.08%), Query Frame = 2 Query: 266 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSR-----------GLWQPFTALLGDTPTV---DAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILK---NVEFDALRIIYSKFHSVVSFLPTMATVL 775 +R+R+KSV+N +KIT+AM++VAA+K+R Q + ++R GL Q D P + + K ++ +S D+GLCGG NS ++ ++ + S + K+VI+G KA R ++ IE + L++ P + + +AD++L + D + ++Y+KF S+V+ P + T+L Sbjct: 7 IRDRIKSVRNTRKITEAMRLVAAAKVRRAQEQVLSTRPFADRLAQVLAGLQQRLQFENVDLPLLQRREVKTVALLVVSGDRGLCGGYNSNVIRRAEQRARELSAQGLDYKFVIVGRKAGQYFQR-REQPIEATYSGLEQIP-TAQEANDIADELLSLFLSGTVDRVELVYTKFLSLVASNPVVQTLL 191
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_RHIME (ATP synthase gamma chain OS=Rhizobium meliloti GN=atpG PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.163e-14 Identity = 59/187 (31.55%), Postives = 95/187 (50.80%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDI--ELIITELQKNPL-NYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPT 760 S + ++NR+ SVK QKITKAMKMVAA+KLR Q AE +R Q A+L + T T ++++ ++++GLCGG NS + ++ + K K + +G+K +L RD I + + E++K N ++ ++ EFD + YS+F SV+S +PT Sbjct: 3 SLKDLKNRIASVKATQKITKAMKMVAAAKLRRAQEAAEAARPYSQRMAAVLANIAQAVGADDSAPRLMTGTGRDDTHLVIVCTAERGLCGGFNSQIARFARDHVRKLLAQGKTVKIICVGKKGFDMLRRDFASLIIDRVDLREVKKIGFENADRIGHKVIELFDKGEFDVCTLFYSEFKSVISQIPT 189 The following BLAST results are available for this feature:
BLAST of CK937611 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK937611 ID=CK937611; Name=CK937611; organism=Citrus sinensis; type=EST; length=786bpback to top |