CK937611
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_SCHPO (ATP synthase subunit gamma, mitochondrial OS=Schizosaccharomyces pombe GN=atp3 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.519e-14 Identity = 54/170 (31.76%), Postives = 91/170 (53.53%), Query Frame = 2 Query: 266 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD--TPTVDAKKNVIVTISSDKGLCGGINSTAVK-ISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV-EFDALRIIYSKFHSVVSFLPTM 763 + R+KS+KNI+KITK +K VA +KL Q E S ++ + + T + K ++V SSDKGLCGGI+S+ + I + LH + + ILGEK + L+R + L + ++ + ++ +IL++ ++D + ++Y+KF S VSF M Sbjct: 37 IEQRLKSIKNIEKITKTIKTVAQTKLTRAQRAMEASNKYYRVSDEVFKEAGTKAPEEGKTLMVACSSDKGLCGGIHSSISRLIRRELH--DPKTFENTSLCILGEKVRTQLLRFCPESFYLTFAHIGGASPSFEEALQISSNILEHAKDYDRIVLVYNKFASAVSFETVM 204
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_RHILW (ATP synthase gamma chain OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=atpG PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.519e-14 Identity = 62/193 (32.12%), Postives = 94/193 (48.70%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEK---------AKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPT 760 S + ++NR+ SVK QKITKAMKMVAA+KLR Q AE +R Q A+L + T T + +++V ++++GLCGG NS + ++ + K K +G+K A I+ R +D++ I E N Q+ D+ EFD + YS+F SV+S +PT Sbjct: 3 SLKDLKNRIASVKATQKITKAMKMVAAAKLRRAQEAAEAARPYSQRMGAVLANIAKAVTDADGAPTLMTGTGKDQVHLLVVCTAERGLCGGFNSQIARFARDHVRKLVAEGKTVKIFTVGKKGYDILRREYASLIIERKELRDVKRIGFE------NADQIGKRIIDMYAAGEFDVCTLFYSEFKSVISQIPT 189
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_SYNP6 (ATP synthase gamma chain OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=atpG PE=3 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.984e-14 Identity = 57/187 (30.48%), Postives = 102/187 (54.55%), Query Frame = 2 Query: 266 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSR-----------GLWQPFTALLGDTPTV---DAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILK---NVEFDALRIIYSKFHSVVSFLPTMATVL 775 +R+R+KSV+N +KIT+AM++VAA+K+R Q + ++R GL Q D P + + K ++ +S D+GLCGG NS ++ ++ + S + K+VI+G KA R ++ IE + L++ P + + +AD +L + D + ++Y+KF S+V+ P + T+L Sbjct: 7 IRDRIKSVRNTRKITEAMRLVAAAKVRRAQEQVLSTRPFADRLAQVLAGLQQRLQFENVDLPLLQRREVKTVALLVVSGDRGLCGGYNSNVIRRAEQRARELSAQGLDYKFVIVGRKAGQYFQR-REQPIEATYSGLEQIP-TAQEANDIADQLLSLFLSGTVDRVELVYTKFLSLVASNPVVQTLL 191
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_NOVAD (ATP synthase gamma chain OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=atpG PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.591e-14 Identity = 54/193 (27.98%), Postives = 97/193 (50.26%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTP---------------TVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIEL-IITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVL 775 S + ++ R+ SVK+ QKITKA +MVAA+KLR Q AE +R ++G T +++++V +++DKGLCGG+NS +K +K + K + ++G+K +A + RD I T L + P + + + +A ++L E FD ++ +F + ++ LP ++ Sbjct: 3 SLKELKGRINSVKSTQKITKAKQMVAAAKLRKAQAAAEAARPYASRLAEVMGSLAAKVAGQDNGPLLMRGTGSNQRHLLVVVNTDKGLCGGLNSNIIKEAKLQARALEAAGKTVTFYLVGKKGRAPIRRDYPNGIAAGYDTSLVRTP-GFDEAAAIAQELLALFEAGKFDVAHLVAPEFKNALTQLPVTTQII 194
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_RHIL3 (ATP synthase gamma chain OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=atpG PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.420e-14 Identity = 60/193 (31.09%), Postives = 94/193 (48.70%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEK---------AKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPT 760 S + ++NR+ SVK QKITKAMKMVAA+KLR Q AE +R Q A+L + T T + +++V ++++GLCGG NS + ++ + K K +G+K A I+ R +D++ + E N Q+ ++ EFD + YS+F SV+S +PT Sbjct: 3 SLKDLKNRIASVKATQKITKAMKMVAAAKLRRAQEAAEAARPYSQRMGAVLANIAKAVTDADGAPTLMTGTGQDQVHLLVVCTAERGLCGGFNSQIARFAREHVRKLVAEGKTVKIFTVGKKGYDILRREFASLIIERKELRDVKRVGFE------NADQIGKRIIEMYAAGEFDVCTLFYSEFKSVISQIPT 189
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_PROMM (ATP synthase gamma chain OS=Prochlorococcus marinus (strain MIT 9313) GN=atpG PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.420e-14 Identity = 56/187 (29.95%), Postives = 96/187 (51.34%), Query Frame = 2 Query: 266 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALL-----------GDTP---TVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILV-RDSKKDIELIITELQKNPLNYTQVSVLADDILK--NVEFDALRIIYSKFHSVVSFLPTMATVL 775 +R+R+ SVKN +KIT+AM++VAA+K+R Q + SR +L D P T D K ++ ++ D+GLCGG NS +K ++ + +G + V++G KA R S+ I T L++ P + S+ + + + + D + +IY+KF ++VS P + T+L Sbjct: 7 IRDRIVSVKNTRKITEAMRLVAAAKVRRAQEQVLRSRPFADRLARVLENIQSRMSFEMADAPLLKTSDLKTITLLAVTGDRGLCGGYNSNIIKRTEQRYAELNGQGYKVDLVLIGRKAITYFSNRSSQYTIRATFTGLEQVPTSDDAESITTEVLAEFLSQSTDRIEVIYTKFINLVSCNPVVQTLL 193
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_PROM3 (ATP synthase gamma chain OS=Prochlorococcus marinus (strain MIT 9303) GN=atpG PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.420e-14 Identity = 56/187 (29.95%), Postives = 96/187 (51.34%), Query Frame = 2 Query: 266 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALL-----------GDTP---TVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILV-RDSKKDIELIITELQKNPLNYTQVSVLADDILK--NVEFDALRIIYSKFHSVVSFLPTMATVL 775 +R+R+ SVKN +KIT+AM++VAA+K+R Q + SR +L D P T D K ++ ++ D+GLCGG NS +K ++ + +G + V++G KA R S+ I T L++ P + S+ + + + + D + +IY+KF ++VS P + T+L Sbjct: 7 IRDRIVSVKNTRKITEAMRLVAAAKVRRAQEQVLRSRPFADRLARVLENIQSRMSFEMADAPLLKTSDLKTITLLAVTGDRGLCGGYNSNIIKRTEQRYAELNGQGYKVDLVLIGRKAITYFSNRSSQYTIRATFTGLEQVPTSDDAESITTEVLAEFLSQSTDRIEVIYTKFINLVSCNPVVQTLL 193
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_HYPNA (ATP synthase gamma chain OS=Hyphomonas neptunium (strain ATCC 15444) GN=atpG PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.773e-14 Identity = 54/188 (28.72%), Postives = 102/188 (54.26%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD-------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDI--ELIITELQKNPLNYTQVSVLADDIL----KNVEFDALRIIYSKFHSVVSFLPT 760 S + ++NR+ SVK+ QKITKAM++VAA+KL+ Q A +R + A+L + T + +++V +++++GL GG N+ K+++ + K K + +G+K + +L R+ + +++++ N N+T S+ +L +N EFD +IYS+F +V+S +PT Sbjct: 3 SLKDLKNRIGSVKSTQKITKAMQLVAAAKLKRAQEAATAARPYAERLAAVLANLAATTGQGGPKLLTGNGTDQTHLLVVMTAERGLAGGFNAYVAKLARLKIQQLQSEGKTVKVLTIGKKGREVLAREHSALFTGHVNLSDVKSN--NFTDASLSVGQMLTKGFENGEFDVATLIYSQFKNVLSQVPT 188
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_GLOVI (ATP synthase gamma chain OS=Gloeobacter violaceus GN=atpG PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.773e-14 Identity = 56/187 (29.95%), Postives = 96/187 (51.34%), Query Frame = 2 Query: 266 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALL-----------GDTPTV---DAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILK---NVEFDALRIIYSKFHSVVSFLPTMATVL 775 +R+R+KSVKN QKITKAM++VAA+++R Q + R LL +P + D +K +++ I+ D+GLCG NS ++ + + K+ ++G KA + R S I +T + N ++ DDIL + E+D + ++Y++F S++S PT+ T+L Sbjct: 7 IRDRIKSVKNTQKITKAMRLVAAARVRRAQEQVLAGRPFADRLVGLLFRLRSRLRFEDVQSPLMERRDVQKVLVLVIAGDRGLCGAYNSNIIRRTVQYLRELQQQGKQFALYLVGNKAISFF-RRSNFPIAKTLTNVDPNTPLEGANQLITDDILAPFLSGEYDQVELVYTRFVSLISSRPTVQTLL 192
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_RHOCA (ATP synthase gamma chain OS=Rhodobacter capsulatus GN=atpG PE=1 SV=3) HSP 1 Score: 77.7962 bits (190), Expect = 7.540e-14 Identity = 58/192 (30.21%), Postives = 96/192 (50.00%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALL-------GDTP--------TVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVL 775 S + ++NR+ SVKN +KITKAM+MVAA+ +R Q AE +R + A++ G T T K +++V ++ ++GLCGG N+ K++K+ K K + +G+K + L RD + I L+Y ++ +I+ E+D I +S F SV+S +PT V+ Sbjct: 3 SLKDLKNRIVSVKNTRKITKAMQMVAAANIRRAQESAEAARPYAERMNAVMSSLAGAVGSTDGAPRLLAGTGSDKVHLLVIMTGERGLCGGFNANIAKLAKAKAMELLAQGKTVKILTVGKKGRDALRRDLGQYYIDHIDLSDVKKLSYPVAQKISQNIIDRFEAGEYDVATIFFSVFQSVISQVPTAKQVI 194 The following BLAST results are available for this feature:
BLAST of CK937611 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937611 ID=CK937611; Name=CK937611; organism=Citrus sinensis; type=EST; length=786bpback to top |