CK937611
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_RHIE6 (ATP synthase gamma chain OS=Rhizobium etli (strain CIAT 652) GN=atpG PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.540e-14 Identity = 60/187 (32.09%), Postives = 94/187 (50.27%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDI--ELIITELQKNPL-NYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPT 760 S + ++NR+ SVK QKITKAMKMVAA+KLR Q AE +R Q +L + T T + +++V ++++GLCGG NS + ++ + K K +G+K IL R+ I + E++K N Q+ ++ + EFD + YS+F SV+S +PT Sbjct: 3 SLKDLKNRIASVKATQKITKAMKMVAAAKLRRAQEAAEAARPYSQRMNTVLANIAKAVTDADGAPVLMTGTGKDQVHLLVVCTAERGLCGGFNSQIARFARDHVRKLVAEGKTVKIFTVGKKGYDILRREFASLIVERKELREVKKIGFENADQIGKRIIEMFEAGEFDVCTLFYSEFKSVISQVPT 189
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_PROM1 (ATP synthase gamma chain OS=Prochlorococcus marinus (strain NATL1A) GN=atpG PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.540e-14 Identity = 54/187 (28.88%), Postives = 98/187 (52.41%), Query Frame = 2 Query: 266 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALL-----------GDTPTV---DAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILV-RDSKKDIELIITELQKNPLNYTQVSVLADDILK--NVEFDALRIIYSKFHSVVSFLPTMATVL 775 +R+R+ SVKN +KIT+AM++VAA+K+R Q + SR +L D+P + + K ++ ++ D+GLCGG N+ +K ++ + G V++G+KA R S +I EL++ P + S+ ++ + + + D + +I++KF S+VS PT+ T+L Sbjct: 7 IRDRIVSVKNTRKITEAMRLVAAAKVRRAQDQVLRSRPFADRLARVLENIQSRMQFEAADSPLLNKREVKTITLLAVTGDRGLCGGYNANIIKRTEKRYAELKGQGYSPDLVLIGKKAIGYFENRSSLYNIRATFKELEQVPTSEDAASITSEVLAEFLSESTDRVEVIFTKFVSLVSCNPTIQTLL 193
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_MAGSA (ATP synthase gamma chain OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=atpG PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.847e-14 Identity = 56/183 (30.60%), Postives = 93/183 (50.82%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDI---LKNVEFDALRIIYSKFHSVVS 748 S + +R ++ SVK+ +KIT AMKMVAASKLR Q AE +R + +LG + T K +++V +++D+GLCGG NS+ V+ +K++ K K + +G KA+ L RD + + L + + + + +A I EFD ++Y+KF S ++ Sbjct: 3 SLKDLRMKIVSVKSTRKITSAMKMVAASKLRRAQTAAEAARPFAERMERMLGTLAASLAGQSGAPRMISGTGFDKVHLLVAVTADRGLCGGFNSSIVRATKAMAADLLKQGKTIKIMPVGRKAREQLRRDYGQYMIEGFENLGRKGIVFAEADQVASQISAMFDAEEFDVCTVVYNKFKSAIA 185
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_CYAP4 (ATP synthase gamma chain OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=atpG PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.847e-14 Identity = 54/187 (28.88%), Postives = 98/187 (52.41%), Query Frame = 2 Query: 266 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALL-----------GDTPTV---DAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILK---NVEFDALRIIYSKFHSVVSFLPTMATVL 775 +R+R++SVKN QKIT+AM++VAA+K+R Q + +R +L + P + + KK ++ +S D+GLCG N+ +K + K + +V++G KA R ++ I+ T L++ P + S +AD++L + D + ++Y+KF S++S P + T+L Sbjct: 7 IRDRIQSVKNTQKITEAMRLVAAAKVRRAQEQVIATRPFADRLAQVLYGLQARLRFEEANLPLLRRREVKKVALLVVSGDRGLCGAYNTNVIKRAAERSKELKAEGIDYTFVLVGRKAIQYFQR-REQPIDATYTGLEQVP-TAAEASQIADELLSLFLSESVDRVELVYTKFVSLISSRPVVQTLL 191
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_PROMT (ATP synthase gamma chain OS=Prochlorococcus marinus (strain NATL2A) GN=atpG PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.286e-13 Identity = 54/187 (28.88%), Postives = 97/187 (51.87%), Query Frame = 2 Query: 266 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALL-----------GDTPTV---DAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILV-RDSKKDIELIITELQKNPLNYTQVSVLADDILK--NVEFDALRIIYSKFHSVVSFLPTMATVL 775 +R+R+ SVKN +KIT+AM++VAA+K+R Q + SR +L D+P + + K ++ ++ D+GLCGG N+ +K ++ + G V++G+KA R S I EL++ P + S+ ++ + + + D + +I++KF S+VS PT+ T+L Sbjct: 7 IRDRIVSVKNTRKITEAMRLVAAAKVRRAQDQVLRSRPFADRLARVLENIQSRMQFEAADSPLLNKREVKTITLLAVTGDRGLCGGYNANIIKRTEKRYAELKGQGYSPDLVLIGKKAIGYFENRSSLYKIRATFKELEQVPTSEDAASITSEVLAEFLSESTDRVEVIFTKFVSLVSCNPTIQTLL 193
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_BRUME (ATP synthase gamma chain OS=Brucella melitensis GN=atpG PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.286e-13 Identity = 59/186 (31.72%), Postives = 91/186 (48.92%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLG---------DTP-----TVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPT 760 S + +RNR+ SVK QKITKAM+MVAA+KLR Q AE +R Q A+L D P T +++V ++ +GLCGG NS ++++ + K K + +G+K IL R+ + + + L + + I+K E FD + YS+F SV+S + T Sbjct: 3 SLKDLRNRIASVKATQKITKAMQMVAAAKLRRAQEAAEAARPYSQRMGAVLANIAQNVSGEDAPALMVGTGKDDVHLLVVCTAKRGLCGGFNSQIARLARDHARKLLAEGKTVKIITVGKKGADILRREFSALLHDHVDLREVKQLAFVHADQIGHKIIKLFEEGAFDVCTLFYSEFKSVISQVST 188
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_BRUMB (ATP synthase gamma chain OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=atpG PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.286e-13 Identity = 59/186 (31.72%), Postives = 91/186 (48.92%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLG---------DTP-----TVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPT 760 S + +RNR+ SVK QKITKAM+MVAA+KLR Q AE +R Q A+L D P T +++V ++ +GLCGG NS ++++ + K K + +G+K IL R+ + + + L + + I+K E FD + YS+F SV+S + T Sbjct: 3 SLKDLRNRIASVKATQKITKAMQMVAAAKLRRAQEAAEAARPYSQRMGAVLANIAQNVSGEDAPALMVGTGKDDVHLLVVCTAKRGLCGGFNSQIARLARDHARKLLAEGKTVKIITVGKKGADILRREFSALLHDHVDLREVKQLAFVHADQIGHKIIKLFEEGAFDVCTLFYSEFKSVISQVST 188
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_BRUAB (ATP synthase gamma chain OS=Brucella abortus GN=atpG PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.286e-13 Identity = 59/186 (31.72%), Postives = 91/186 (48.92%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLG---------DTP-----TVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPT 760 S + +RNR+ SVK QKITKAM+MVAA+KLR Q AE +R Q A+L D P T +++V ++ +GLCGG NS ++++ + K K + +G+K IL R+ + + + L + + I+K E FD + YS+F SV+S + T Sbjct: 3 SLKDLRNRIASVKATQKITKAMQMVAAAKLRRAQEAAEAARPYSQRMGAVLANIAQNVSGEDAPALMVGTGKDDVHLLVVCTAKRGLCGGFNSQIARLARDHARKLLAEGKTVKIITVGKKGADILRREFSALLHDHVDLREVKQLAFVHADQIGHKIIKLFEEGAFDVCTLFYSEFKSVISQVST 188
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_BRUA2 (ATP synthase gamma chain OS=Brucella abortus (strain 2308) GN=atpG PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.286e-13 Identity = 59/186 (31.72%), Postives = 91/186 (48.92%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLG---------DTP-----TVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPT 760 S + +RNR+ SVK QKITKAM+MVAA+KLR Q AE +R Q A+L D P T +++V ++ +GLCGG NS ++++ + K K + +G+K IL R+ + + + L + + I+K E FD + YS+F SV+S + T Sbjct: 3 SLKDLRNRIASVKATQKITKAMQMVAAAKLRRAQEAAEAARPYSQRMGAVLANIAQNVSGEDAPALMVGTGKDDVHLLVVCTAKRGLCGGFNSQIARLARDHARKLLAEGKTVKIITVGKKGADILRREFSALLHDHVDLREVKQLAFVHADQIGHKIIKLFEEGAFDVCTLFYSEFKSVISQVST 188
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_BRUA1 (ATP synthase gamma chain OS=Brucella abortus (strain S19) GN=atpG PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.286e-13 Identity = 59/186 (31.72%), Postives = 91/186 (48.92%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLG---------DTP-----TVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPT 760 S + +RNR+ SVK QKITKAM+MVAA+KLR Q AE +R Q A+L D P T +++V ++ +GLCGG NS ++++ + K K + +G+K IL R+ + + + L + + I+K E FD + YS+F SV+S + T Sbjct: 3 SLKDLRNRIASVKATQKITKAMQMVAAAKLRRAQEAAEAARPYSQRMGAVLANIAQNVSGEDAPALMVGTGKDDVHLLVVCTAKRGLCGGFNSQIARLARDHARKLLAEGKTVKIITVGKKGADILRREFSALLHDHVDLREVKQLAFVHADQIGHKIIKLFEEGAFDVCTLFYSEFKSVISQVST 188 The following BLAST results are available for this feature:
BLAST of CK937611 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937611 ID=CK937611; Name=CK937611; organism=Citrus sinensis; type=EST; length=786bpback to top |