CK937611
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG1_ARATH (ATP synthase gamma chain 1, chloroplastic OS=Arabidopsis thaliana GN=ATPC1 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.286e-13 Identity = 58/191 (30.37%), Postives = 97/191 (50.79%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD------TPTVD--------AKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILK---NVEFDALRIIYSKFHSVVSFLPTMATVL 775 S + +R+R+ SVKN QKIT+AMK+VAA+K+R Q N R + +L + T VD KK +V ++ D+GLCGG N+ +K +++ K G E + +G+K + +R ++ + E P + +ADD+ + E D + ++Y+KF S+V P + T+L Sbjct: 52 SLRELRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQTDDVDVPLTKVRPVKKVALVVVTGDRGLCGGFNNFIIKKAEARIKELKGLGLEYTVISVGKKGNSYFLRRPYIPVDKYL-EAGTLP-TAKEAQAVADDVFSLFISEEVDKVELLYTKFVSLVKSEPVIHTLL 240
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_AGRRK (ATP synthase gamma chain OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=atpG PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.680e-13 Identity = 61/190 (32.11%), Postives = 93/190 (48.95%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNP---LNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPT 760 S + ++NR+ SVK QKITKAMKMVAA+KLR Q AE +R Q A+L + T T + +++V ++++GLCGG NS + ++ + K K +G+K IL R+ LII + + + L I++ EFD + YS+F SV+S +PT Sbjct: 3 SLKDLKNRIASVKATQKITKAMKMVAAAKLRRAQEAAEAARPYSQRMGAVLANITAAVSDADGAPLLMTGTGKSDVHLLVVCTAERGLCGGFNSQIARFARDHVRKLLAEGKTVKIFTVGKKGYDILRREY---ASLIIERKELRDVKRVGFENADALGKRIIEMFEAGEFDVCTLFYSEFKSVISQVPT 189
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_YEAST (ATP synthase subunit gamma, mitochondrial OS=Saccharomyces cerevisiae GN=ATP3 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.194e-13 Identity = 62/187 (33.16%), Postives = 101/187 (54.01%), Query Frame = 2 Query: 242 VRSIST-QIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALL---GDTPTVD-------AKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLAD---DILKNVEFDALRIIYSKFHSVVSFLPT 760 VR+ +T + V R+KS+KNI+KITK MK+VA+++L + KA+ S L +T +D A K +IV I+SDKGLCG I+S K + LN P+ + V +G+K K L+R +I+L I + K+ + + +++AD ++K + + I Y+ S +SF P+ Sbjct: 30 VRTYATLKEVEMRLKSIKNIEKITKTMKIVASTRLSKAE-KAKISAKKMDEAEQLFYKNAETKNLDVEATETGAPKELIVAITSDKGLCGSIHSQLAKAVR--RHLNDQPNAD--IVTIGDKIKMQLLRTHPNNIKLSINGIGKDAPTFQESALIADKLLSVMKAGTYPKISIFYNDPVSSLSFEPS 211
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_SYNS9 (ATP synthase gamma chain OS=Synechococcus sp. (strain CC9902) GN=atpG PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.194e-13 Identity = 59/191 (30.89%), Postives = 101/191 (52.88%), Query Frame = 2 Query: 266 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALL-----------GDTPTVD---AKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKD--IELIITELQKNPLNYTQVSVLADDILKNVEF-----DALRIIYSKFHSVVSFLPTMATVL 775 +R+R+KSVKN +KIT+AM++VAA+K+R Q + SR + +L D P ++ + +V I+ D+GLCGG N+ +K ++ G K V++G KA + S +D I+ IT L++ P + + +A D+L EF D + ++++KF ++VS P + T+L Sbjct: 7 IRDRIKSVKNTRKITEAMRLVAAAKVRRAQEQVLRSRPFADRLSRILENLQSRMRFEEADAPLMEQRTVETITLVAITGDRGLCGGYNANIIKRTEQRFAELKGKGFNVKLVVIGSKAISYF---SNRDYPIQAKITGLEQVP-TADEANTIATDML--AEFMAAGTDRVEMVFTKFINLVSCKPVLQTLL 191
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_POLNS (ATP synthase gamma chain OS=Polynucleobacter necessarius (strain STIR1) GN=atpG PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.194e-13 Identity = 54/193 (27.98%), Postives = 97/193 (50.26%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLAD----DILKNVEFDALRIIYSKFHSVVSFLPTMATVLXXE 784 ST+ +R+++KSV+N +KITKAM+MVAASK+R Q + N+R + ++ + T + KK + +++DKGLCGG+N+ +++ + + + E Y +G K L R K LI +Q + + V + A + + E DA+ + Y++F + + P + +L E Sbjct: 3 STKEIRSKIKSVQNTRKITKAMEMVAASKMRRAQERMRNARPYAEKIREIVANLSKANPGFRPAYMATREVKKVGTILVTTDKGLCGGLNTNVLRLIANQVRDLQEKNIEIAYTAIGSKGLQFLNRSKAK---LISQTIQIGDIPHMDVLIGAIVSQLEAFERGEIDAVYLAYTRFVNAMKQEPVLEKLLPLE 192
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_BREBN (ATP synthase gamma chain OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=atpG PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.194e-13 Identity = 57/190 (30.00%), Postives = 101/190 (53.16%), Query Frame = 2 Query: 266 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTVDA------------KKNVIVTISSDKGLCGGINSTAV-KISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELI--ITELQKNP--LNYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLXXE 784 +R +KS K++++ITKAMKMVAA+KLR Q KAE +R ++ + + KK + I+SD+GL GG N+ + K+ ++++ + D+ +VI G K + SK++ L+ +T L +P + +++ A + +N + D L + Y+KF S +S +PT+ +L E Sbjct: 8 IRRSIKSKKDMRQITKAMKMVAAAKLRRNQDKAEAARPYADKIQEVIASIASGTSGSKHPMLQNRPVKKTGYIVITSDRGLAGGYNANILRKVVNTINEKHKSKDEYGIFVI-GRKGRDFF---SKRNYPLLDEVTGLPTSPAFADIKKIAGAAVQMFENEQIDELYLCYNKFQSAISQIPTVKQLLPLE 193
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_BRASO (ATP synthase gamma chain OS=Bradyrhizobium sp. (strain ORS278) GN=atpG PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.865e-13 Identity = 59/198 (29.80%), Postives = 99/198 (50.00%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTVDA---------------KKNVIVTISSDKGLCGGINSTAVKIS--KSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV-------EFDALRIIYSKFHSVVSFLPTMATVL 775 S + +R R+ S K QKITKAM+MVAASKLR Q+ AE +R + A++ + A + ++++ + ++GL G NS+ V+++ ++L +N G K+ K+ +G K L R +K I + + + V A+DI K V EFD + YS+F SV++ +PT ++ Sbjct: 3 SLKDMRVRIASTKATQKITKAMQMVAASKLRRAQLAAEAARPYAEKMDAVISNIAAASAGSPASSKLLAGTGRDQVHLLLVCTGERGLSGAFNSSIVRLARERALALMNQG--KDVKFFCVGRKGYEQLRRQFEKQIIAHVDLRSVRQIGF----VHAEDIAKQVIARFDAGEFDVCTLFYSRFKSVIAQIPTAQQII 194
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_BRASB (ATP synthase gamma chain OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=atpG PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.865e-13 Identity = 59/198 (29.80%), Postives = 99/198 (50.00%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTVDA---------------KKNVIVTISSDKGLCGGINSTAVKIS--KSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV-------EFDALRIIYSKFHSVVSFLPTMATVL 775 S + +R R+ S K QKITKAM+MVAASKLR Q+ AE +R + A++ + A + ++++ + ++GL G NS+ V+++ ++L +N G K+ K+ +G K L R +K I + + + V A+DI K V EFD + YS+F SV++ +PT ++ Sbjct: 3 SLKDMRVRIASTKATQKITKAMQMVAASKLRRAQLAAEAARPYAEKMDAVISNIAAASAGSPASSKLLAGTGRDQVHLLLVCTGERGLSGAFNSSIVRLARERALALMNQG--KDVKFFCVGRKGYEQLRRQFEKQIIAHVDLRSVRQIGF----VHAEDIAKQVIARFDAGEFDVCTLFYSRFKSVIAQIPTAQQII 194
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_RHOPB (ATP synthase gamma chain OS=Rhodopseudomonas palustris (strain BisB18) GN=atpG PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.742e-13 Identity = 58/194 (29.90%), Postives = 96/194 (49.48%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTVDA---------------KKNVIVTISSDKGLCGGINSTAVKIS--KSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDIL---KNVEFDALRIIYSKFHSVVSFLPTMATVL 775 S + +R R+ S K QKITKAM+MVAASKLR Q+ AE +R + A++ + + A + ++++ + ++GL G NS+ V+++ ++L +N G KE K +G K L R + I I L + +A ++ N EFD + YS+F SV+S +PT ++ Sbjct: 3 SLKDMRVRIASTKATQKITKAMQMVAASKLRRAQLAAEAARPYAERMDAVISNIASAAAGSPGAPVLLAGTGKDQVHLLLVCTGERGLSGAFNSSIVRLARERALSLMNQG--KEVKLFCVGRKGYEQLRRTFDRQIVENIELRSVRQLGFVNAEDIAHKVVARFNNGEFDVCTLFYSRFKSVISQIPTAQQII 194
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_EHRCR (ATP synthase gamma chain OS=Ehrlichia chaffeensis (strain Arkansas) GN=atpG PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.742e-13 Identity = 52/167 (31.14%), Postives = 91/167 (54.49%), Query Frame = 2 Query: 275 RMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTVD-------AKKN--VIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRD-SKKDIELIITELQKNPLNYTQVSVLADDILKNVEFDALRIIYSKFHSVV 745 R+KSVK+IQK TK M+M++A+KL +Q K EN++ ++++ P+ AKK ++V +SSD+GLCG N+ VK +KS + +KE K + G+KA ++ S K + + Y ++ V I + +FD + I+++KF++ + Sbjct: 10 RIKSVKSIQKTTKVMQMISAAKLHRVQQKLENAKKHLLELSSIVDYVPSDGVHNCASIAKKERVLLVVMSSDRGLCGNFNNLIVKFTKSYVEKLESSNKEVKLIFFGKKAYDMMYSQYSDKILNVFSNTKSITDFLYFKLFVYNSGIDFD-QFDNVMILFNKFYTTI 175 The following BLAST results are available for this feature:
BLAST of CK937611 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937611 ID=CK937611; Name=CK937611; organism=Citrus sinensis; type=EST; length=786bpback to top |