CK937611
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_ANASP (ATP synthase gamma chain OS=Anabaena sp. (strain PCC 7120) GN=atpG PE=3 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 3.742e-13 Identity = 53/187 (28.34%), Postives = 102/187 (54.55%), Query Frame = 2 Query: 266 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALL-----------GDTPTV---DAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILK---NVEFDALRIIYSKFHSVVSFLPTMATVL 775 +R+R++SVKN +KIT+AM++VAA+++R Q + +R +L D P + + K ++ IS D+GLCGG N+ ++ +++ K + +VI+G KA+ R ++ I+ T L++ P + + +AD++L + + D + ++Y++F S+VS P + T+L Sbjct: 7 IRDRIQSVKNTKKITEAMRLVAAARVRRAQEQVIATRPFADRLAQVLYGLQTRLRFEDVDLPLLKKREVKSVGLLVISGDRGLCGGYNTNVIRRAENRAKELKAEGLDYTFVIVGRKAEQYF-RRREQPIDASYTGLEQIP-TADEANKIADELLSLFLSEKVDRIELVYTRFVSLVSSRPVIQTLL 191
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_MYCCT (ATP synthase gamma chain OS=Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) GN=atpG PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.887e-13 Identity = 58/183 (31.69%), Postives = 90/183 (49.18%), Query Frame = 2 Query: 266 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLAD--DILKNVEFDALRIIYSKFHSVVSFLPTMATV 772 ++ + SV+NI KIT AM++VA++KLR I K ++ +L D A K + V I+S+ GLCGG NS K+ KL E++ +G KA + R K I+ IT++ N N S+ D D+ N EFD ++I+Y+KF + V+F P + + Sbjct: 7 LKTEISSVRNISKITNAMQLVASAKLRKISKKVIDTHNYVSEVYSLFNDIIRQTDKSVFLKESNFKANKTLWVVINSNLGLCGGYNSNVNKLVLQNLKL------EDEIFAIGSKAVSFF-RSKKIKIKNQITDIDINFTNKKARSISNDLLDMYINHEFDEIKIVYTKFINNVTFEPAIIRI 182
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_MARMM (ATP synthase gamma chain OS=Maricaulis maris (strain MCS10) GN=atpG PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.887e-13 Identity = 61/190 (32.11%), Postives = 98/190 (51.58%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD-------TP--------TVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITEL----QKNPLNYTQVSVLADDI---LKNVEFDALRIIYSKFHSVVSFLP 757 S + ++NR+ SVK+ QKITKAM+MVAA+KLR Q AE +R Q A++ + TP T + ++V +++D+GLCGG N+ VK ++ K+ K + +G+K L R+ LI+ ++ +K T V + D I +N EFD ++ ++F SV+S P Sbjct: 3 SLKDLKNRIGSVKSTQKITKAMQMVAAAKLRRAQEAAEAARPYAQRMAAVMANLSTAMSGTPGASPLLVGTGKSDAYLLVVMTADRGLCGGFNTNIVKKARERINALKAEGKDVKVICVGKKGADQLKRNF---ASLIVDKMELSGEKTITGATSVRI-GDKIRHMFENGEFDVCELVSAEFVSVISQKP 188
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_KLULA (ATP synthase subunit gamma, mitochondrial OS=Kluyveromyces lactis GN=ATP3 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.383e-13 Identity = 54/172 (31.40%), Postives = 92/172 (53.49%), Query Frame = 2 Query: 266 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLW----QPFTALLGDTPTVDA-KKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKN--VEFDALRIIYSKFHSVVSFLPT 760 + R+KS+KNI+KITK MK+VA+++L + +A+NS + F P DA KK++I+ I+SDKGLCG I+S K + K D V +G+K K L+R + +++ + K + + S++A+ IL+ + + I ++ S +SF P+ Sbjct: 23 IETRLKSIKNIEKITKTMKIVASTRLSKAE-RAKNSAKEYALADAAFYKNAETVPLEDAEKKDLIIAITSDKGLCGSIHSQLAKAVRLQLKQTPNAD----VVAIGDKVKGQLLRTNSDNLKFAFNGVGKEAPTFEETSLIANKILEGGASNYKKVSIFWNDPISSLSFEPS 189
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_GEOSF (ATP synthase gamma chain OS=Geobacter sp. (strain FRC-32) GN=atpG PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.383e-13 Identity = 57/186 (30.65%), Postives = 93/186 (50.00%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD-----TPTVDAK-----------KNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSK--KDIELIITELQKNPLNYTQVSVLADDILK---NVEFDALRIIYSKFHSVVS 748 S + ++ R+ SVKN +ITKAMKMV+A+KLR Q +R P+ A LG+ + DA K +++ ++SD+GLCGG N+ K ++ K + + +G K L K K+ + + LNY ++LA ++++ + EFD + IIY+ F SV+S Sbjct: 3 SLKSIKKRIVSVKNTGQITKAMKMVSAAKLRRAQENVVAAR----PYAAKLGEVLGRLSRNQDADSSPLMIKRTTGKALLIVVTSDRGLCGGFNANLCKAAERFVKERGAEFTDLSIMTIGRKGYEFLKNRQKIRKNFGTVFSN-----LNYQTAALLAQEVIQGYLDEEFDEVFIIYNAFRSVMS 179
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_ANAVT (ATP synthase gamma chain OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=atpG PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.383e-13 Identity = 53/187 (28.34%), Postives = 102/187 (54.55%), Query Frame = 2 Query: 266 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALL-----------GDTPTV---DAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILK---NVEFDALRIIYSKFHSVVSFLPTMATVL 775 +R+R++SVKN +KIT+AM++VAA+++R Q + +R +L D P + + K ++ IS D+GLCGG N+ ++ +++ K + +VI+G KA+ R ++ I+ T L++ P + + +AD++L + + D + ++Y++F S+VS P + T+L Sbjct: 7 IRDRIQSVKNTKKITEAMRLVAAARVRRAQEQVIATRPFADRLAQVLYGLQTRLRFEDVDLPLLKKREVKSVGLLVISGDRGLCGGYNTNVIRRAENRAKELKKEGLDYTFVIVGRKAEQYF-RRREQPIDASYTGLEQIP-TAEEANKIADELLSLFLSEKVDRIELVYTRFVSLVSSRPVIQTLL 191
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_SYNP2 (ATP synthase gamma chain OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=atpG PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.336e-13 Identity = 52/187 (27.81%), Postives = 101/187 (54.01%), Query Frame = 2 Query: 266 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALL-----------GDTPTV---DAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILK---NVEFDALRIIYSKFHSVVSFLPTMATVL 775 +R+R++SVKN +KIT+AM++VAA+K+R Q + ++R +L D P + + K ++ I+ D+GLCGG N+ ++ ++ K + K+V++G KA ++ + + L++ P + + S +AD++L + E D + +IY++F S++S P + T+L Sbjct: 7 IRDRIQSVKNTKKITEAMRLVAAAKVRRAQEQVTSTRPFANTLLQVLYSLKSRLRLEEADLPLLKQREVKCVGLLVITGDRGLCGGYNANIIRKAERRAKELAAAGINYKFVLVGRKAVQYF-QNRQAPVAKTYAGLEQIP-SAAEASDIADELLSLFLSEEVDKIELIYTRFVSLISSQPVVQTLL 191
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_PROMA (ATP synthase gamma chain OS=Prochlorococcus marinus GN=atpG PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.336e-13 Identity = 55/187 (29.41%), Postives = 96/187 (51.34%), Query Frame = 2 Query: 266 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALL-----------GDTPTVDAK---KNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILV-RDSKKDIELIITELQKNPLNYTQVSVLADDILK--NVEFDALRIIYSKFHSVVSFLPTMATVL 775 +R+R+ SVKN +KIT+AM++VAA+K+R Q + SR +L D+P + A+ K ++ ++ D+GLCGG N+ +K ++ + S E V++G KA R S+ I +L++ P + ++ + + + D + IIY+KF S+VS P + T+L Sbjct: 7 IRDRIVSVKNTRKITEAMRLVAAAKVRRAQEQVLRSRPFADRLARVLENIQSRMKFEAADSPLLKARAVQKVTLLAVTGDRGLCGGYNTNVIKRTEQRYGELSSQGFEIDLVLIGRKAITYFQNRSSQYKIRASFQDLEQVPTSKDAEEATSEVLSEFLSESTDRVEIIYTKFISLVSCDPVVQTLL 193
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_CYAP7 (ATP synthase gamma chain OS=Cyanothece sp. (strain PCC 7424) GN=atpG PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.336e-13 Identity = 52/189 (27.51%), Postives = 97/189 (51.32%), Query Frame = 2 Query: 260 QIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPT--------------VDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILK---NVEFDALRIIYSKFHSVVSFLPTMATVL 775 + +R+R++SVKN +KIT+AM++VAA+K+R Q + +R +L + + K ++ ++ D+GLCGG N+ +K ++ K K V++G KA R I+ TEL + P + ++ S ++D++L + D + +IY++F S++S P + T+L Sbjct: 5 KFIRDRIQSVKNTKKITEAMRLVAAAKVRRAQEQVIATRPFADALAQVLYNLQNRLQFGEVSLPLLTQREIKTVAVLVVTGDRGLCGGYNANVIKRTEQRIKELKSQGINYKLVLIGRKAVQYFER-RNAPIQTKYTELSQIP-SASEASTISDELLSLFLSETVDRVELIYTRFLSLISSKPVVQTLL 191
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_SPHWW (ATP synthase gamma chain OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=atpG PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.089e-12 Identity = 51/192 (26.56%), Postives = 95/192 (49.48%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVL 775 S + ++ R+ SVK+ QKITKAMKMVAA+KLR Q+ AE R + A++ T + + +++V +S++GL G N+ V+ ++ K K+ ++G+K +A+L R I + + + ++ ++A+D++ EFD + ++KF S + PT ++ Sbjct: 3 SLKALKVRITSVKSTQKITKAMKMVAAAKLRRAQMAAEAGRPYAERLDAVMSSLASKVTVGPQSPKLLAGTGNDQVHLLVVATSERGLAGAFNTNIVRAARKTADSLIAQGKTVKFYLIGKKGRAVLQRLFPGKIVHQVDQSHIKNVAFSDAHMVAEDLIGRYSAGEFDVAHLFFAKFQSALVQEPTELQII 194 The following BLAST results are available for this feature:
BLAST of CK937611 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937611 ID=CK937611; Name=CK937611; organism=Citrus sinensis; type=EST; length=786bpback to top |