CK937611
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_POLSQ (ATP synthase gamma chain OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=atpG PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.089e-12 Identity = 51/190 (26.84%), Postives = 94/190 (49.47%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTV------------DAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLAD-DILKNVEFDALRIIYSKFHSVVSFLPTMATVLXXE 784 ST+ +R+++KSV+N +KITKAM+MVAASK+R Q + N+R + ++ + + KK + +++DKGLCGG+N+ ++ + + + E Y +G K L R K I I ++ +++A + + E DA+ + Y++F + + P + +L E Sbjct: 3 STKEIRSKIKSVQNTRKITKAMEMVAASKMRRAQERMRNARPYAEKIREIVANLSKANPEFRPAYMEAREVKKVGTILVTTDKGLCGGLNTNVLRFITNQVRDLQEKNIEIVYTAIGSKGLQFLNRSKAKLISQTIQIGDTPHMDVLIGAIIAQLEAFERGEIDAVYLAYNRFVNAMKQEPVLEKLLPLE 192
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_BRAJA (ATP synthase gamma chain OS=Bradyrhizobium japonicum GN=atpG PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.089e-12 Identity = 58/196 (29.59%), Postives = 92/196 (46.94%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTVDA---------------KKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV-------EFDALRIIYSKFHSVVSFLPTMATVL 775 S + +R R+ S K QKITKAM+MVAASKLR Q AE +R +A++ + A + ++++ + ++GL G NS+ V++++ KE K+ +G K L R K I + L + V A+DI K V EFD + YS+F SV++ +PT ++ Sbjct: 3 SLKDMRVRIASTKATQKITKAMQMVAASKLRRAQTAAEAARPYADKMSAVISNIAGAAAGSPGAPALLAGTGRDQVHLLLVCTGERGLSGAFNSSIVRLARERALALMAQGKEVKFFCVGRKGYEQLRRQFDKQIVEHLDLRSVRQLGF----VNAEDIAKKVLARFEAGEFDVCTLFYSRFRSVIAQIPTAQQII 194
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_SYNPX (ATP synthase gamma chain OS=Synechococcus sp. (strain WH8102) GN=atpG PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.422e-12 Identity = 56/190 (29.47%), Postives = 99/190 (52.11%), Query Frame = 2 Query: 266 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALL-----------GDTPTV---DAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKD--IELIITELQKNP----LNYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVL 775 +R+R+KSVKN +KIT+AM++VAA+K+R Q + SR +L +P + D + +V+++ D+GLCGG N+ +K ++ +G + K V++G KA +K+D ++ + L++ P N VLA+ I D + +I++KF ++VS P + T+L Sbjct: 7 IRDRIKSVKNTRKITEAMRLVAAAKVRRAQEQVLRSRPFADRLARILENLQSRMRFEDASSPLMEQRDVETITLVSVTGDRGLCGGYNANIIKRTEQRFAELTGKGFKVKLVLIGNKAIGYF---TKRDYPVQATFSGLEQVPTADEANTISTDVLAEFI--GAGTDRVELIFTKFINLVSCKPVVQTLL 191
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_RICPR (ATP synthase gamma chain OS=Rickettsia prowazekii GN=atpG PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.422e-12 Identity = 54/191 (28.27%), Postives = 95/191 (49.74%), Query Frame = 2 Query: 266 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDT----------------PTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIE--LIITELQKNPLNYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLXXE 784 +R R+KSVK+ QKITKAM++V+ASK+ I+ + NS + ++ D T+ +K N+++ ++S++GLCG N + +K K+ K + ++ K +I+G+K L R I T++ L QV +KN+E I ++KF + ++ +PT +L E Sbjct: 7 LRTRIKSVKSTQKITKAMQLVSASKMTKIKTQIANSNFYIEAINKMMSDICSMTSCELSIEEQKFFNTMPSKINLLIVMTSERGLCGMFNYSIIKQVKNDIKELTNKGEQIKLIIIGKKGYEALKRQYANYINSYFEFTKIHSENL-ILQVKEKIMCAVKNLEVSNCIIYFNKFKNAMTQIPTKQKILPIE 196
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_RHOPS (ATP synthase gamma chain OS=Rhodopseudomonas palustris (strain BisB5) GN=atpG PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.422e-12 Identity = 55/187 (29.41%), Postives = 88/187 (47.06%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTVDA---------------KKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDIL---KNVEFDALRIIYSKFHSVVSFLPT 760 S + +R R+ S K QKITKAM+MVAASKLR Q+ AE +R + A++ + A + ++++ + ++GL G NS+ V++++ K K+ +G K L R K I I L + +A ++ N EFD + YS+F SV+S +PT Sbjct: 3 SLKDMRVRIASTKATQKITKAMQMVAASKLRRAQMAAEAARPYAEKMDAVISNIAGAAAGSPGAPVLLAGTGKDQVHLLLVCTGERGLSGAFNSSIVRLARERAYALMNQGKTVKFFCVGRKGYEQLRRTFDKQIIENIELRSVRQLGFVNAEDIAQKVIARFNNGEFDVCTLFYSRFKSVISQIPT 189
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_PROM4 (ATP synthase gamma chain OS=Prochlorococcus marinus (strain MIT 9211) GN=atpG PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.422e-12 Identity = 53/187 (28.34%), Postives = 94/187 (50.27%), Query Frame = 2 Query: 266 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALL-----------GDTPTV---DAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILV-RDSKKDIELIITELQKNPLNYTQVSVLADDILK--NVEFDALRIIYSKFHSVVSFLPTMATVL 775 +R+R+ SVKN +KIT+AM++VAA+K+R Q + SR +L D P + D + ++ ++ D+GLCGG N+ +K ++ + V++G KA R S+ I +L++ P + SV ++ + + + D + +IY+KF S+VS P + T+L Sbjct: 7 IRDRIVSVKNTRKITEAMRLVAAAKVRRAQEQVLRSRPFADRLARVLQNIQSRMQFETADAPLLKSRDVRTITLLAVTGDRGLCGGYNTNIIKRTEQRYNELKRQGFTPDLVLIGRKAIGYFQNRSSQYKIRAFFQDLEQVPTSKDAESVTSEILAEFLSKSTDRIEVIYTKFISLVSCNPVVQTLL 193
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_NITHX (ATP synthase gamma chain OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=atpG PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.422e-12 Identity = 55/197 (27.92%), Postives = 96/197 (48.73%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTVDA---------------KKNVIVTISSDKGLCGGINSTAVKIS--KSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLXXE 784 S + +R R+ S K QKITKAM+MVAASKLR Q AE +R + ++ + + A + ++++ + ++GL G NS+ V+++ ++L +N G K+ K+ +G K L R +K I + L + +A ++ EFD + YS+F SV++ +PT ++ E Sbjct: 3 SLKDMRVRIASTKATQKITKAMQMVAASKLRRAQSAAEAARPYAEKMDQVISNIASAAAGSPGAPVLLGGTGKDQVHLLLVCTGERGLSGAFNSSIVRLARERALALMNQG--KDVKFFCVGRKGYEQLRRTFEKQIVENVELRSVRQLGFVNAEAIAKKVIARFNAGEFDVCTLFYSRFKSVIAQVPTAQQIIPLE 197
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_GEOLS (ATP synthase gamma chain OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=atpG PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.422e-12 Identity = 55/196 (28.06%), Postives = 96/196 (48.98%), Query Frame = 2 Query: 254 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDT-------------PTV---DAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLXXE 784 S + ++ R+ SVKN ++ITKAMKMV+A+KLR Q +R P+ +G+ P + DAKK +++ ++SD+GLCGG N+ K + K + + +G K L S+ + + P NY ++LA D+++ E+D + ++++ F +V+S T +L E Sbjct: 3 SLKSIKKRIVSVKNTRQITKAMKMVSAAKLRRAQENVVAAR----PYAQKMGEVLQSLAGNLEGNLHPLLEKRDAKKLLLIVVTSDRGLCGGFNTNLCKAGERYIKEKQAEFDQISIMTVGRKGYEFL--KSRHTVYKNFANMLSKP-NYQAAAMLAQDVIEGYLAEEYDQVVMLFNSFRTVMSQDITFQQLLPIE 191
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_PROMP (ATP synthase gamma chain OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=atpG PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.857e-12 Identity = 56/192 (29.17%), Postives = 100/192 (52.08%), Query Frame = 2 Query: 266 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLG-----------DTPTV---DAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKA--------KAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVL 775 +R+R+ SVKN +KIT+AM++VAA+K+R Q + SR +L D+P + + KK +V I++D+GLCGG N+ +K + + E +++G+KA +++ + K++E + T + + VLA+ + +N D + IIY+KF ++VS P + T+L Sbjct: 7 IRDRIVSVKNTRKITEAMRLVAAAKVRRAQDQVLKSRPFADKLARVLENIQSRVQFEAVDSPLLSKRNVKKISLVCITADRGLCGGYNTNIIKKVEIRYAELIKQGYEPNLILVGKKAIGYFQNRKDRYVIKSTFKELEQVPTAIDSEGITN---DVLAEFLSEN--SDRVEIIYTKFITLVSCAPVVQTLL 193
BLAST of CK937611 vs. ExPASy Swiss-Prot
Match: ATPG_EHRCJ (ATP synthase gamma chain OS=Ehrlichia canis (strain Jake) GN=atpG PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.857e-12 Identity = 52/172 (30.23%), Postives = 91/172 (52.91%), Query Frame = 2 Query: 275 RMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLG--DTPTVD-------AKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE-FDALRIIYSKFHSVVSFLPT 760 R+KSVK+IQK TK M+M++A+KL +Q K EN+R + ++ D V +K ++V +SSD+GLCG N+ VK +KS + +KE + G+KA ++ I ++ ++ K+ N+ + N E FD + ++++KF+S + P+ Sbjct: 10 RIKSVKSIQKTTKVMQMISAAKLHRVQQKLENARKHLLEISNVIDSVDKDNVSDVFSKHKKEKVLLVIMSSDRGLCGNFNNLIVKFTKSYIEDLESDNKEVNLLFFGKKAYDMMYSQYSDKILNVLPDV-KSITNFLYFKLFVYSSGVNFEKFDNVIVLFNKFYSTILQKPS 180 The following BLAST results are available for this feature:
BLAST of CK937611 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937611 ID=CK937611; Name=CK937611; organism=Citrus sinensis; type=EST; length=786bpback to top |