CK937599

Overview
NameCK937599
Unique NameCK937599
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length663
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK937599_ssr39 microsatellite CK937599_ssr39:39..54. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CK937599 vs. ExPASy Swiss-Prot
Match: AK1D1_HUMAN (3-oxo-5-beta-steroid 4-dehydrogenase OS=Homo sapiens GN=AKR1D1 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.987e-35
Identity = 85/200 (42.50%), Postives = 122/200 (61.00%), Query Frame = 1
Query:  100 LNTGAKIPSVGLGTWQSDP-----GVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDGVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGF-KPEN----LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVACV--XPAVNQVECHPSWQQQKLREFCK 663
            L+ G  IP +GLGT+ S+P     G    +V  AI  GYRHID A IY NE E+G  +++   +G V+RED++   KLW   H PE V   L+RTLR LQ+DY+DLY++  P+  K G   + + EN      K ++ +TW+AMEA  D+G  +++GVSNF+ ++L  +L    +   P  NQVECHP + Q KL +FC+
Sbjct:   12 LSDGNSIPIIGLGTY-SEPKSTPKGACATSVKVAIDTGYRHIDGAYIYQNEHEVGEAIREKIAEGKVRREDIFYCGKLWATNHVPEMVRPTLERTLRVLQLDYVDLYIIEVPMAFKPGDEIYPRDENGKWLYHKSNLCATWEAMEACKDAGLVKSLGVSNFNRRQLELILNKPGLKHKPVSNQVECHPYFTQPKLLKFCQ 210          
BLAST of CK937599 vs. ExPASy Swiss-Prot
Match: AKCL2_MACFA (1,5-anhydro-D-fructose reductase OS=Macaca fascicularis GN=AKR1E2 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.389e-35
Identity = 88/215 (40.93%), Postives = 119/215 (55.35%), Query Frame = 1
Query:  118 IPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDGVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPEN-----------------------LDKPD--IP------STWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVACV--XPAVNQVECHPSWQQQKLREFCK 663
            IP+VGL  W++ PG V  AV  AI AGYRH +CA  Y NEKE+G  ++   ++G V+REDL+I SKLW   H+   V  A  R+L+ L+++YLDLYL+HWP       +GFKP +                       LD+ D  IP       TW+AME L  +G  + IGVSNF+ ++L  LL    +   P  NQ+ECHP   Q+ L  FC+
Sbjct:    4 IPAVGLSCWKASPGKVTEAVKVAIDAGYRHFNCAYFYHNEKEVGAGIRYKIKEGAVRREDLFIASKLWCTCHKKSLVKTACRRSLKALKLNYLDLYLIHWP-------MGFKPPHPEWIMSCSELSFCLSHPGVHDLPLDESDMVIPGDTDFLDTWEAMEDLVITGLVKNIGVSNFNHEQLERLLNKPGLRFKPVTNQIECHPYLTQKNLISFCQ 211          
BLAST of CK937599 vs. ExPASy Swiss-Prot
Match: AK1CD_MOUSE (Aldo-keto reductase family 1 member C13 OS=Mus musculus GN=Akr1c13 PE=1 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 3.389e-35
Identity = 85/199 (42.71%), Postives = 120/199 (60.30%), Query Frame = 1
Query:  100 LNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKA---GYRHIDCAQIYGNEKEIGLVLKKFFEDGVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPEN------LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVACV--XPAVNQVECHPSWQQQKLREFCK 663
            LN G  IP++G GT++        ++ AA  A   GYRH+D A  Y  E+EIG  ++   + GVVKREDL+IT+KLW     PE V  AL+++L+ LQ+DY+DLY+MH+PV MK G   F P N      LD  D   TW+ +E   D+G  ++IGVSNF+ ++L  +L    +   P  NQVECH    Q+KL ++C+
Sbjct:   10 LNDGHLIPALGFGTYKPKEVPKSKSLEAACLALDVGYRHVDTAYAYQVEEEIGQAIQSKIKAGVVKREDLFITTKLWCTCFRPELVKPALEKSLKKLQLDYVDLYIMHYPVPMKSGDNDF-PVNEQGKSLLDTVDFCDTWERLEECKDAGLVKSIGVSNFNHRQLERILNKPGLKYKPVCNQVECHLYLNQRKLLDYCE 207          
BLAST of CK937599 vs. ExPASy Swiss-Prot
Match: GR_BACSU (Glyoxal reductase OS=Bacillus subtilis GN=yvgN PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 5.780e-35
Identity = 86/189 (45.50%), Postives = 114/189 (60.32%), Query Frame = 1
Query:  100 LNTGAKIPSVGLGTWQSDPG-VVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDGVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPENLDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVACVXPAVNQVECHPSWQQQKLREFCK 663
            L+ G ++P  GLG ++ + G     +V AAIK GYR ID A IY NE+ +G+ +K   E GV  RE+L+ITSK+WN     E    A +++L  LQ+DYLDLYL+HWP K K                  TW+A+E LY  GK RAIGVSNF    L +LL+ A + P VNQVE HP   Q++LR++CK
Sbjct:   11 LHNGVEMPWFGLGVFKVENGNEATESVKAAIKNGYRSIDTAAIYKNEEGVGIGIK---ESGVA-REELFITSKVWNEDQGYETTLAAFEKSLERLQLDYLDLYLIHWPGKDK---------------YKDTWRALEKLYKDGKIRAIGVSNFQVHHLEELLKDAEIKPMVNQVEFHPRLTQKELRDYCK 180          
BLAST of CK937599 vs. ExPASy Swiss-Prot
Match: YTBE_BACSU (Uncharacterized oxidoreductase ytbE OS=Bacillus subtilis GN=ytbE PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.682e-34
Identity = 80/189 (42.33%), Postives = 111/189 (58.73%), Query Frame = 1
Query:  100 LNTGAKIPSVGLGTWQSDPGV-VGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDGVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPENLDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVACVXPAVNQVECHPSWQQQKLREFCK 663
            L+ G ++P  GLG +Q + G  + NAV  AI  GYR ID A IYGNE  +G  +++  E+  + REDL+ITSK+WNA    E+   A + +L  L +DYLDLYL+HWPV+ K                   W+A+E LY  G+ +AIGVSNF    L DL+  A + P +NQVE HP   Q++L  +C+
Sbjct:   11 LHNGVEMPWFGLGVFQVEEGSELVNAVKTAIVHGYRSIDTAAIYGNEAGVGEGIREGIEEAGISREDLFITSKVWNADLGYEETLAAFETSLSKLGLDYLDLYLIHWPVEGK---------------YKEAWRALETLYKEGRIKAIGVSNFQIHHLEDLMTAAEIKPMINQVEFHPRLTQKELIRYCQ 184          
BLAST of CK937599 vs. ExPASy Swiss-Prot
Match: XYL1_TRIRE (NAD(P)H-dependent D-xylose reductase OS=Trichoderma reesei GN=xyl1 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.682e-34
Identity = 84/195 (43.08%), Postives = 109/195 (55.90%), Query Frame = 1
Query:  100 LNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDGVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMK--KGSVGFKP----------ENLDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVACVXPAVNQVECHPSWQQQKL 648
            LN+G  +P VG G W+ D  V  + V  AIKAGYR  D A  YGNEKE G  + +  +DG+VKREDL+I SKLW  +H+ + V     R L D QIDY DL+L+H+P  ++    SV + P                 +  TW AME L D G AR+IGVSN+  + + D L  A + PA  Q+E HP  QQ  L
Sbjct:    8 LNSGYDMPQVGFGLWKVDNAVCADTVYNAIKAGYRLFDGACDYGNEKECGEGVARAIKDGLVKREDLFIVSKLWQTFHDEDKVEPITRRQLADWQIDYFDLFLVHFPAALEYVDPSVRYPPGWFYDGKSEVRWSKTTTLQQTWGAMERLVDKGLARSIGVSNYQAQSVYDALIYARIKPATLQIEHHPYLQQPDL 202          
BLAST of CK937599 vs. ExPASy Swiss-Prot
Match: P100_LEIMA (Probable reductase OS=Leishmania major GN=P100/11E PE=2 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 1.682e-34
Identity = 86/188 (45.74%), Postives = 106/188 (56.38%), Query Frame = 1
Query:  100 LNTGAKIPSVGLGTWQSDPG-VVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDGVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPENLDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVACVXPAVNQVECHPSWQQQKLREFC 660
            L+ G K+P  GLG WQS  G V  NAV  A+ AGYRHID A IY NE+ +G  L+       V RED++IT+KLWN     E    A + + + L +DY+DLYL+HWP    +G      E     D   +W+A E LY   K RAIGVSNF    L D+L +  V P VNQVE HP   Q  LR FC
Sbjct:   11 LSNGVKMPQFGLGVWQSPAGEVTENAVNWALCAGYRHIDTAAIYKNEESVGAGLRA----SGVPREDVFITTKLWNTEQGYESTLAAFEESRQKLGVDYIDLYLIHWP----RGKDILSKEGKKYLD---SWRAFEQLYKEKKVRAIGVSNFHIHHLEDVLAMCTVTPMVNQVELHPLNNQADLRAFC 187          
BLAST of CK937599 vs. ExPASy Swiss-Prot
Match: AKCL2_HUMAN (1,5-anhydro-D-fructose reductase OS=Homo sapiens GN=AKR1E2 PE=1 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 1.682e-34
Identity = 86/215 (40.00%), Postives = 121/215 (56.28%), Query Frame = 1
Query:  118 IPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDGVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPEN-----------------------LDKPD--IPS------TWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVACV--XPAVNQVECHPSWQQQKLREFCK 663
            IP+VGL +W++ PG V  AV  AI AGYRH DCA  Y NE+E+G  ++   ++G V+REDL+I +KLW   H+   V  A  ++L+ L+++YLDLYL+HWP       +GFKP +                       LD+ +  IPS      TW+AME L  +G  + IGVSNF+ ++L  LL    +   P  NQ+ECHP   Q+ L  FC+
Sbjct:    4 IPAVGLSSWKASPGKVTEAVKEAIDAGYRHFDCAYFYHNEREVGAGIRCKIKEGAVRREDLFIATKLWCTCHKKSLVETACRKSLKALKLNYLDLYLIHWP-------MGFKPPHPEWIMSCSELSFCLSHPRVQDLPLDESNMVIPSDTDFLDTWEAMEDLVITGLVKNIGVSNFNHEQLERLLNKPGLRFKPLTNQIECHPYLTQKNLISFCQ 211          
BLAST of CK937599 vs. ExPASy Swiss-Prot
Match: AK1D1_RABIT (3-oxo-5-beta-steroid 4-dehydrogenase OS=Oryctolagus cuniculus GN=AKR1D1 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.196e-34
Identity = 83/200 (41.50%), Postives = 121/200 (60.50%), Query Frame = 1
Query:  100 LNTGAKIPSVGLGTWQSDP-----GVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDGVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGF-KPEN----LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVACV--XPAVNQVECHPSWQQQKLREFCK 663
            L  G  IP +GLGT+ S+P     G    +V  AI  GYRHID A IY NE E+G   ++   +G V+RED++   KLW   H+P  V   L+RTL+ L++DY+DLY++  P+  K G V + + EN      K ++ +TW+A+EA  D+G  +++GVSNF+ ++L  LL    +   P  NQVECHP + Q KL +FC+
Sbjct:   12 LGDGNSIPIIGLGTY-SEPKTTPKGSCATSVKIAIDTGYRHIDGAYIYQNEHEVGETFREKIAEGKVRREDIFYCGKLWATNHDPVMVRPTLERTLKVLKLDYIDLYIIEIPMAFKPGDVVYPRDENGKWLYHKTNLCATWEALEACKDAGLVKSLGVSNFNRQQLELLLNKPGLKHKPVCNQVECHPYFTQPKLLKFCQ 210          
BLAST of CK937599 vs. ExPASy Swiss-Prot
Match: XYL1_ASPNG (NAD(P)H-dependent D-xylose reductase OS=Aspergillus niger GN=xyrA PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.869e-34
Identity = 80/198 (40.40%), Postives = 114/198 (57.58%), Query Frame = 1
Query:  100 LNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDGVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMK------KGSVGFKPE----NLDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVACVXPAVNQVECHPSWQQQKLREFCK 663
            LN+G  +P VG G W+ +     + +  AIK GYR  D A  YGNE E G  + +  +DG+VKRE+L+I SKLWN++H+ + V     + L D  IDY DLY++H+P+ +K      +   G+K E          I  TW AME+L D   AR+IG+SNFS + + DLL  A + PA  Q+E HP   Q +L E+ +
Sbjct:    8 LNSGYDMPLVGFGLWKVNNDTCADQIYHAIKEGYRLFDGACDYGNEVEAGQGIARAIKDGLVKREELFIVSKLWNSFHDGDRVEPICRKQLADWGIDYFDLYIVHFPISLKYVDPAVRYPPGWKSEKDELEFGNATIQETWTAMESLVDKKLARSIGISNFSAQLVMDLLRYARIRPATLQIEHHPYLTQTRLVEYAQ 205          
The following BLAST results are available for this feature:
BLAST of CK937599 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
AK1D1_HUMAN1.987e-3542.503-oxo-5-beta-steroid 4-dehydrogenase OS=Homo sapie... [more]
AKCL2_MACFA3.389e-3540.931,5-anhydro-D-fructose reductase OS=Macaca fascicu... [more]
AK1CD_MOUSE3.389e-3542.71Aldo-keto reductase family 1 member C13 OS=Mus mus... [more]
GR_BACSU5.780e-3545.50Glyoxal reductase OS=Bacillus subtilis GN=yvgN PE=... [more]
YTBE_BACSU1.682e-3442.33Uncharacterized oxidoreductase ytbE OS=Bacillus su... [more]
XYL1_TRIRE1.682e-3443.08NAD(P)H-dependent D-xylose reductase OS=Trichoderm... [more]
P100_LEIMA1.682e-3445.74Probable reductase OS=Leishmania major GN=P100/11E... [more]
AKCL2_HUMAN1.682e-3440.001,5-anhydro-D-fructose reductase OS=Homo sapiens G... [more]
AK1D1_RABIT2.196e-3441.503-oxo-5-beta-steroid 4-dehydrogenase OS=Oryctolagu... [more]
XYL1_ASPNG2.869e-3440.40NAD(P)H-dependent D-xylose reductase OS=Aspergillu... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004778_F02 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0003_IIF_F02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937599 ID=CK937599; Name=CK937599; organism=Citrus sinensis; type=EST; length=663bp
GGGGGTCCACTCATTCGCTCACGCTTTTTGGCTCATTGCTCTCTCTCTCT
CTCTAACGCTTAGCTTTCGAAAATGGCAAATGAGATTCGACAGTTCGTGC
TGAACACCGGAGCCAAAATCCCGTCCGTTGGATTAGGCACGTGGCAGTCT
GATCCTGGTGTCGTCGGCAATGCTGTTGCTGCCGCCATCAAGGCTGGATA
CCGACATATTGATTGTGCTCAAATTTACGGCAATGAAAAGGAGATTGGTT
TGGTGCTGAAGAAGTTTTTTGAAGATGGTGTTGTCAAGCGTGAGGATTTG
TGGATTACCTCTAAACTCTGGAATGCTTATCATGAACCAGAAGATGTACC
AGAGGCATTGGACAGAACTTTGCGGGACTTACAGATTGACTACCTTGATC
TATACCTTATGCACTGGCCAGTTAAGATGAAGAAGGGGTCTGTTGGCTTC
AAGCCAGAAAACCTTGATAAACCAGATATACCTAGCACGTGGAAAGCAAT
GGAGGCACTTTATGACTCTGGCAAGGCTCGAGCGATCGGAGTAAGCAATT
TTTCTACAAAGAAGCTTGGAGATTTGTTGGAAGTGGCATGTGTNNNTCCT
GCTGTTAACCAAGTGGAATGCCATCCTTCATGGCAGCAGCAAAAGCTTCG
TGAATTCTGTAAA
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