CX675341
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX675341 vs. ExPASy Swiss-Prot
Match: G3O21_WHEAT (Gibberellin 3-beta-dioxygenase 2-1 OS=Triticum aestivum GN=GA3ox2-1 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.097e-16 Identity = 73/285 (25.61%), Postives = 117/285 (41.05%), Query Frame = 1 Query: 73 MENFPIIDLSKLNGDERSATMEMINDAC---------ENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQM-----VASKGLEAVQSEVNDLDWES--TFFLRHLPVSNMAEIPDLEDDYRK---AMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSN---YPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKD--DQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYP 855 + + P++D S G + + + D C ++WG F L HG+ ELL V+ + ++ + + G + S + W TF +L P DYR M+EF E+ +A V K T + YP CP P GL AHTD+G + Q V GLQL + D+WV VP + ++V+N+GD +++TNG++ SV HR + + +R+S+ F P + + P Sbjct: 31 LHDHPVVDGSGAGGGPDAVPVVDMRDPCAAEAVALAAQDWGAFLLEGHGVPLELLAGVEAAIGGMFALPASEKMRAVRRPGDSCGYGSPPISSFFSKCMWSEGYTFSPANLRSDLRKLWPKAGHDYRHFCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEHKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQS-LVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVNRDSDRISLGYFLGPPAHVKVAP 314
BLAST of CX675341 vs. ExPASy Swiss-Prot
Match: GAOX1_ORYSJ (Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. japonica GN=20ox1 PE=2 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 3.191e-16 Identity = 69/280 (24.64%), Postives = 113/280 (40.36%), Query Frame = 1 Query: 112 GDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRF------KQMVASKGLEAVQSE-------VNDLDWEST-------------------FFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYP 855 G ERS+ + + +ACE GFF +VNHGI LL+ R CMD F KQ + E+ + L W+ T + +R L + + ++ Y M ++EL +V + F+ +++ YP C +P G H D + +L QD V GL++ + +W + P ++V+N+GD ++N +Y+S LHR + + R S+A F P D V+ P Sbjct: 54 GAERSSVVRQVGEACERHGFFLVVNHGIEAALLEEAHR--------CMDAFFTLPLGEKQRAQRRAGESCGYASSFTGRFASKLPWKETLSFRYSSAGDEEGEEGVGEYLVRKLGAEHGRRLGEVYSRYCHEMSRLSLELMEVLGESLGIVGDRRHYF-----RRFFQRNDSIM--RLNYYPACQRPLDTLGTGPHCDPTSLTILHQD-HVGGLEVWAEGRWRAIRPRPGALVVNVGDTFMALSNARYRSCLHRAVVNSTAPRRSLAFFLCPEMDTVVRP 317
BLAST of CX675341 vs. ExPASy Swiss-Prot
Match: G2OX2_PEA (Gibberellin 2-beta-dioxygenase 2 OS=Pisum sativum GN=GA2OX2 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.213e-15 Identity = 75/296 (25.34%), Postives = 127/296 (42.91%), Query Frame = 1 Query: 52 LRNKQITMENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASK-GLEAVQSEVNDLDWESTFFLRHLPVSNMAE------------IPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPK-------PDLIK-------GLRAHTDAGGIILLFQDDEVSGLQL-LKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYP 855 +R K+ P IDLS ERS E++ ACE +GFF++VNH + E++ + E + K ++ + ++ G N E + L H +++E + +DY KA+K+ E+ ++A K+ + ++++YPP K P I+ G H+D I+ + + + V GLQ+ W+ VPP + +GD L+V+TNG++ SV HRV+ T RMS+ F P + +I P Sbjct: 10 IRTKKTKAVGIPTIDLSL----ERSQLSELVVKACEEYGFFKVVNHSVPKEVISRLDEEGIEFFSKNSSEKRQAGTSTPFGYGCKNIGPNGDKGELEYLLLHSNPISISERSKTIAKDHPIKFSCIVNDYIKAVKDLTCEILELAAEGLWVPDKSSL------SKIIKDEHSDSL-LRINHYPPVKKLGNDNWDPSKIQNSNNNNIGFGEHSDPQ-ILTILRSNNVGGLQISTHHGLWIPVPPDPSEFYVMVGDALQVLTNGRFVSVRHRVLTNTTKPRMSMMYFAAPPLNWLISP 293
BLAST of CX675341 vs. ExPASy Swiss-Prot
Match: G2OX3_ARATH (Gibberellin 2-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=GA2OX3 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.069e-15 Identity = 69/270 (25.56%), Postives = 120/270 (44.44%), Query Frame = 1 Query: 85 PIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYG---KCMDQRFKQMVASKGLEAVQSEVNDLDWESTFFLR-------HLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIK--GLRAHTDAGGIILLFQDDEVSGLQL-LKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYP 855 P+IDL+ S I ACE +GFF+++NHG+ +LL +++ + D+ G + + DL W L H + P + +R+A++E+ E+++++ K ++++YP + + + G HTD +I L + ++ GLQ+ +KD WVDV P S + +GD L+V+TNG++KSV HRV+ T+ +R+S+ F P I P Sbjct: 28 PVIDLTD------SDAKTQIVKACEEFGFFKVINHGVRPDLLTQLEQEAINFFALHHSLKDKAGPPDPFGYGTKRIGPN-GDLGWLEYILLNANLCLESHKTTAIFRHTPAI---FREAVEEYIKEMKRMSSKFLEMVEEELKIEPKEKLSRLVKVKESDSCLRMNHYPEKEETPVKEEIGFGEHTDPQ-LISLLRSNDTEGLQICVKDGTWVDVTPDHSSFFVLVGDTLQVMTNGRFKSVKHRVVTNTKRSRISMIYFAGPPLSEKIAP 286 The following BLAST results are available for this feature:
BLAST of CX675341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
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Sequences
The
following sequences are available for this feature:
EST sequence >CX675341 ID=CX675341; Name=CX675341; organism=Citrus sinensis; type=EST; length=855bpback to top |