EL492655

Overview
NameEL492655
Unique NameEL492655
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length395
Libraries
Library NameType
Citrus sinensis flesh cDNA-AFLP Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EL492655 vs. ExPASy Swiss-Prot
Match: HOG1_SETTU (Mitogen-activated protein kinase HOG1 OS=Setosphaeria turcica GN=HOG1 PE=2 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 5.688e-11
Identity = 34/104 (32.69%), Postives = 58/104 (55.77%), Query Frame = 3
Query:   15 LEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDPQCNPPAQVPLSLDI-DENIGEQMIRQMMWNETLHYH 323
            ++ I +    RF++ LP      +++ +  A+P A+DLL+ MLVF+P KR+   +AL HPY++  +DP   P A+        D ++     + MM++E L YH
Sbjct:  211 IQTICSENTLRFVQPLPKRERQPLANKFKNAEPEAVDLLENMLVFDPRKRVRAEQALAHPYLAPYHDPTDEPIAEEKFDWSFNDADLPVDTWKIMMYSEILDYH 314          
BLAST of EL492655 vs. ExPASy Swiss-Prot
Match: MPK9_ARATH (Mitogen-activated protein kinase 9 OS=Arabidopsis thaliana GN=MPK9 PE=2 SV=2)

HSP 1 Score: 65.4698 bits (158), Expect = 9.703e-11
Identity = 35/105 (33.33%), Postives = 56/105 (53.33%), Query Frame = 3
Query:   24 IDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDPQCNPPAQVPLSLDID---ENIGEQMIRQMMWNETLHYHPE 329
            I N KARR++ ++        +  +P  DPLAL LL ++L F+P  R +  EAL  PY  GL +    P  Q    L+ +     I ++ +R++++ E L YHP+
Sbjct:  256 IRNEKARRYLGNMRRKPPVPFTHKFPHVDPLALRLLHRLLAFDPKDRPSAEEALADPYFYGLANVDREPSTQPIPKLEFEFERRKITKEDVRELIYREILEYHPQ 360          
BLAST of EL492655 vs. ExPASy Swiss-Prot
Match: MPK17_ARATH (Mitogen-activated protein kinase 17 OS=Arabidopsis thaliana GN=MPK17 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.703e-11
Identity = 34/109 (31.19%), Postives = 58/109 (53.21%), Query Frame = 3
Query:   15 LEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGL----YDPQCNPPAQVPLSLDIDENIGEQMIRQMMWNETLHYHPE 329
            L  I N KAR+++ ++        +  +P  DP+AL LLQ+++ F+P  R +  EAL  PY  GL    Y+P   P +++    +    +    +R++M+ E L YHP+
Sbjct:  246 LSRIRNEKARKYLGNMRRKDPVPFTHKFPNIDPVALKLLQRLIAFDPKDRPSAEEALADPYFQGLANVDYEPSRQPISKLEFEFE-RRKLTRDDVRELMYREILEYHPQ 353          
BLAST of EL492655 vs. ExPASy Swiss-Prot
Match: MPK11_ORYSJ (Mitogen-activated protein kinase 11 OS=Oryza sativa subsp. japonica GN=MPK11 PE=2 SV=2)

HSP 1 Score: 65.4698 bits (158), Expect = 9.703e-11
Identity = 34/106 (32.08%), Postives = 59/106 (55.66%), Query Frame = 3
Query:   24 IDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGL----YDPQCNPPAQVPLSLDIDENIGEQMIRQMMWNETLHYHPE 329
            + N KAR+++  +   +    S  + +ADPLAL LL+K+L F+P  R +  EAL  PY +GL     +P C P  ++    +      ++ I+++++ E L YHP+
Sbjct:  259 VRNDKARKYLTCMRKKQPASFSHKFLKADPLALQLLRKLLAFDPKDRPSAQEALADPYFNGLAKVEREPSCQPIPKMEFEFE-RRRATKEDIKELIFQEILEYHPQ 363          
BLAST of EL492655 vs. ExPASy Swiss-Prot
Match: MK13_PANTR (Mitogen-activated protein kinase 13 OS=Pan troglodytes GN=MAPK13 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.703e-11
Identity = 34/105 (32.38%), Postives = 59/105 (56.19%), Query Frame = 3
Query:   24 IDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDPQCNPPAQVPLSLDID-ENIGEQMIRQMMWNETLHYHPEAR 335
            +++  A+ +I+SLP +     + L+P+A P A DLL+KML  +  KR+T  +AL HP+     DP+    AQ P    ++ E +     +Q ++ E +++ P AR
Sbjct:  250 LNDXAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPEEETEAQQPFDDSLEHEKLTVDEWKQHIYKEIVNFSPIAR 354          
BLAST of EL492655 vs. ExPASy Swiss-Prot
Match: MK13_HUMAN (Mitogen-activated protein kinase 13 OS=Homo sapiens GN=MAPK13 PE=1 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.703e-11
Identity = 34/105 (32.38%), Postives = 59/105 (56.19%), Query Frame = 3
Query:   24 IDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDPQCNPPAQVPLSLDID-ENIGEQMIRQMMWNETLHYHPEAR 335
            +++  A+ +I+SLP +     + L+P+A P A DLL+KML  +  KR+T  +AL HP+     DP+    AQ P    ++ E +     +Q ++ E +++ P AR
Sbjct:  250 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPEEETEAQQPFDDSLEHEKLTVDEWKQHIYKEIVNFSPIAR 354          
The following BLAST results are available for this feature:
BLAST of EL492655 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
HOG1_SETTU5.688e-1132.69Mitogen-activated protein kinase HOG1 OS=Setosphae... [more]
MPK9_ARATH9.703e-1133.33Mitogen-activated protein kinase 9 OS=Arabidopsis ... [more]
MPK17_ARATH9.703e-1131.19Mitogen-activated protein kinase 17 OS=Arabidopsis... [more]
MPK11_ORYSJ9.703e-1132.08Mitogen-activated protein kinase 11 OS=Oryza sativ... [more]
MK13_PANTR9.703e-1132.38Mitogen-activated protein kinase 13 OS=Pan troglod... [more]
MK13_HUMAN9.703e-1132.38Mitogen-activated protein kinase 13 OS=Homo sapien... [more]

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Properties
Property NameValue
Genbank descriptionC5021 Citrus sinensis flesh cDNA-AFLP Library Citrus sinensis cDNA clone ClC5021, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EL492655 ID=EL492655; Name=EL492655; organism=Citrus sinensis; type=EST; length=395bp
GACTGCGTAGTGATCTGGAGTTCATTGATAATCCAAAAGCCAGGAGATTC
ATCAAATCACTCCCTTACTCCAGGGGGACCCACATTTCCAGTCTTTATCC
CCAGGCTGATCCATTAGCCCTAGACTTATTGCAGAAAATGCTTGTTTTTG
AACCTTCTAAGAGAATCACAGTCACAGAGGCACTTCAACACCCTTACATT
TCAGGGCTCTATGATCCCCAGTGCAACCCACCTGCCCAGGTTCCTCTTAG
TCTTGACATCGACGAGAACATTGGAGAACAGATGATCAGGCAGATGATGT
GGAATGAGACGCTACATTACCACCCAGAGGCTAGGTAATGCTATAAAAGC
TTTCTCTGTTTCTGCTGCTCCTTTGTTGTCTTACTCANGACTCAT
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