CX675327

Overview
NameCX675327
Unique NameCX675327
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length922
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675327 vs. ExPASy Swiss-Prot
Match: LIP1_DROME (Lipase 1 OS=Drosophila melanogaster GN=Lip1 PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 8.779e-23
Identity = 66/201 (32.84%), Postives = 96/201 (47.76%), Query Frame = 1
Query:  130 RRRSPDDGTRSLCSHLIRPNGYPCTEHTVQTKDGYLLALQRVSSRNGNLRVQCGPPVLLVHGLFMGGDAWFLDSTEESLGFILADYGFDVWVANVRGTHWSHGHVTLSEKSKGFWDWSWQDLALYDLAEMICFINLKTS-SKIFLVGHSQG-TIVSLAALTQPDVVEMVEAAALLSPISYLDHITAPLVRRMVSMHLDQMV 726
            R+    D T S+   LI   GY    H V T+DGY+L + R+       R Q  PP LL HGL      + +     SL ++LAD+ +DVW+ N RG  +S  H TL      FWD+SW ++ +YDL  MI  +   T   K+   GHSQG T   +    +P   + V +   L+P  Y          R +S++ + +V
Sbjct:   57 RKNIKQDSTLSV-DKLIAKYGYESEVHHVTTEDGYILTMHRI-------RKQGAPPFLLQHGLVDSSAGFVVMGPNVSLAYLLADHNYDVWLGNARGNRYSRNHTTLDPDESKFWDFSWHEIGMYDLPAMIDHVLKVTGFPKLHYAGHSQGCTSFFVMCSMRPAYNDKVVSMQALAPAVYAKETEDHPYIRAISLYFNSLV 249          
BLAST of CX675327 vs. ExPASy Swiss-Prot
Match: TGCE2_SCHPO (Probable lipase C16A3.12c OS=Schizosaccharomyces pombe GN=SPBC16A3.12c PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 2.643e-19
Identity = 53/158 (33.54%), Postives = 90/158 (56.96%), Query Frame = 1
Query:  190 GYPCTEHTVQTKDGYLLALQRVSSRNGNLRVQCGPPVLLVHGLFMGGDAWF-LDSTEESLGFILADYGFDVWVANVRGTHWSHGHVTLSEKSKGFWDWSWQDLALYDLAEMICFINLKTS-SKIFLVGHSQGTIVSLAALT-QPDVVEMVEAAALLSP 654
            GY   EH V+T+D ++L L R++    +   +    V   HGL    + W  ++ +E SL F+L + G+DVW+ N RG  +S  H+T   K + FW++S  D+A++D+ + + +I  +T   K+  +G SQGT  ++AAL+  PD+ + V     L+P
Sbjct:   83 GYRVEEHLVRTQDNFILCLHRITHPKQSQHKR--EVVYCHHGLMTNSELWVAVNESERSLPFVLIESGYDVWLGNNRGNKYSRKHITYKPKDEEFWNFSLDDMAMFDIPDTVDYILRETGREKLNYIGFSQGTAQAMAALSINPDLNDKVNIFIGLAP 238          
BLAST of CX675327 vs. ExPASy Swiss-Prot
Match: TGCE1_SCHPO (Probable lipase C1672.09 OS=Schizosaccharomyces pombe GN=SPCC1672.09 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.985e-18
Identity = 57/164 (34.76%), Postives = 88/164 (53.66%), Query Frame = 1
Query:  187 NGYPCTEHTVQTKDGYLLALQRVSS----RNGNLRVQCGPPVLLVHGLFMGGDAWFLD-STEESLGFILADYGFDVWVANVRGTHWSHGHVTLSEKSKGFWDWSWQDLALYDLAEMICFINLKTS--SKIFLVGHSQGTIVSLAALT-QPDVVEMVEAAALLSP 654
            +GY   +H V+T+D Y+L + R+S     R G+   +  P V   HGL M  + W  +      L F L + G+DVW+ N RG  +S  H+      K FWD+S  D A YD+ + I +I LKTS  +K+  +G SQGT  + A+L+  P + + + +   L+P
Sbjct:   88 SGYYVEDHLVRTEDDYILCIHRISKDSPGRIGSPHPKKLPVVYCHHGLLMNSEVWVCNVDPRNCLVFDLVNKGYDVWLGNNRGNKYSRQHLRFDSTDKEFWDFSIDDFAQYDIPDTIDYI-LKTSGQTKLTYIGFSQGTAQAFASLSIHPLLNDKINSLIALAP 250          
BLAST of CX675327 vs. ExPASy Swiss-Prot
Match: TGL1_YEAST (Sterol esterase TGL1 OS=Saccharomyces cerevisiae GN=TGL1 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.666e-16
Identity = 50/139 (35.97%), Postives = 74/139 (53.24%), Query Frame = 1
Query:  205 EHTVQTKDGYLLALQRV---SSRNGNLRVQCGPPVLLVHGLFMGGDAWFLD-STEESLGFILADYGFDVWVANVRGTHWSHGHVTLSEKSKGFWDWSWQDLALYDLAEMICFI-NLKTSSKIFLVGHSQGTIVSLAALT 606
            +H V+T+D Y+L L R+   S    N +V     V L HGL M  D W  +    ++L F+L D G+DVW+ N RG  +S  H+    KS  FWD+S  + A +D+   I FI ++    K+  +G SQG+    AA +
Sbjct:   79 DHLVRTEDNYILTLHRIPPISKNRFNNKV-----VYLHHGLLMCSDVWCCNIERHKNLPFVLHDLGYDVWMGNNRGNKYSTAHLNKPPKSNKFWDFSIDEFAFFDIPNSIEFILDITKVDKVICIGFSQGSAQMFAAFS 212          
BLAST of CX675327 vs. ExPASy Swiss-Prot
Match: YEH2_YEAST (Sterol esterase 2 OS=Saccharomyces cerevisiae GN=YEH2 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.396e-12
Identity = 53/169 (31.36%), Postives = 76/169 (44.97%), Query Frame = 1
Query:  190 GYPCTEHTVQTKDGYLLALQRVSSR-NGNLRVQCGPPVLLVHGLFMGGDAWFLDSTEESLGFILADYGFDVWVANVR-GTHWSHGHVTLSEKSKGFWDWSWQDLALYDLAEMICFINLKTS-SKIFLVGHSQGTIVSLAALTQPD--------VVEMVEAAALLSPISY 663
            G    E  V+T DG+++ L    SR N  +      P+LL+HGL     A F  S  +SL + L + GFDVW+ N R G +       L       WDW    +  YDL  +I ++   T  +K+ LV HSQGT      L   +        +V+ +E    L+P  Y
Sbjct:  158 GIDIEEFEVETDDGFIIDLWHFKSRLNDGVEEVKREPILLLHGLLQSCGA-FASSGRKSLAYFLYESGFDVWLGNNRCGLNAKWNMKKLGNDHSKKWDWDMHQMVQYDLKALINYVLDSTGYAKLSLVAHSQGTTQGFMGLVNGEKLYASDFKLVDKLENFVALAPAVY 325          
The following BLAST results are available for this feature:
BLAST of CX675327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
LIP1_DROME8.779e-2332.84Lipase 1 OS=Drosophila melanogaster GN=Lip1 PE=2 S... [more]
TGCE2_SCHPO2.643e-1933.54Probable lipase C16A3.12c OS=Schizosaccharomyces p... [more]
TGCE1_SCHPO4.985e-1834.76Probable lipase C1672.09 OS=Schizosaccharomyces po... [more]
TGL1_YEAST4.666e-1635.97Sterol esterase TGL1 OS=Saccharomyces cerevisiae G... [more]
YEH2_YEAST2.396e-1231.36Sterol esterase 2 OS=Saccharomyces cerevisiae GN=Y... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_61E04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-61E04-J7-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675327 ID=CX675327; Name=CX675327; organism=Citrus sinensis; type=EST; length=922bp
CGCGCACTCAATTATCTCCGAGACAGATATGATATGAGGAGGTCACTGTC
ATCATCACTGGTGGTTGGCGCGATTTTCGCTCTCCTCCTACGCGAAATCT
CCGCCATCAAAACCGATGTTTCGAATCTACGCCGTCGATCACCGGACGAT
GGCACTCGCTCACTCTGCTCTCACCTCATCCGGCCCAACGGCTATCCCTG
CACCGAACACACAGTTCAAACAAAGGATGGTTACTTACTGGCTCTTCAAA
GAGTGTCATCTCGCAATGGGAATCTAAGAGTTCAATGCGGTCCCCCTGTT
TTGCTTGTGCATGGACTCTTCATGGGAGGTGATGCGTGGTTTTTGGATTC
TACGGAAGAGTCATTGGGCTTCATCCTTGCAGATTATGGTTTTGATGTAT
GGGTTGCAAATGTGCGTGGGACGCATTGGAGTCATGGCCATGTAACTTTA
TCCGAGAAGAGTAAGGGCTTTTGGGATTGGAGTTGGCAGGATTTGGCTCT
GTATGACCTTGCTGAAATGATATGTTTCATAAATTTGAAAACAAGCTCCA
AAATTTTCCTTGTTGGACATTCACAGGGAACCATCGTGTCTTTGGCTGCT
CTCACTCAGCCAGACGTAGTGGAAATGGTTGAGGCTGCTGCTCTTTTGAG
TCCTATATCATACTTGGATCATATCACTGCTCCACTTGTACGAAGAATGG
TTAGCATGCATCTTGATCAGATGGTTTTGGCTCTGGGCATGCATCAACTG
AATTTTAGAAGTAATGTGTTAATTGACCTCATCGACTCCCTATGCAATGG
CCATTTAGATTGCAATGACTTGCTAACTGCCATAACAGGGAAGAATTGTT
GCTTCAACAACTCACGAGTGGACTTCTATTTGGAAATGGACCTCACCCTT
CTTCTGCAAAAAACATTCATCA
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