CX675323
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CESA3_ARATH (Cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Arabidopsis thaliana GN=CESA3 PE=1 SV=2) HSP 1 Score: 402.905 bits (1034), Expect = 1.193e-111 Identity = 190/220 (86.36%), Postives = 206/220 (93.64%), Query Frame = -3 Query: 204 LTAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPDVEQCGINC 863 +T+IPLLMYCTLPAVCL TN+FI+PQISN+ASI F+SLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVS+HLFAVFQG+LKVLAGIDTNFTVTSKASDEDGDF ELY+FKW L++NLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWS+LLASIFSLLWVR+DPFT+RVTGPD+ +CGINC Sbjct: 846 ITSIPLLMYCTLPAVCLFTNQFIIPQISNIASIWFLSLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGILKVLAGIDTNFTVTSKASDEDGDFAELYLFKWTTLLIPPTTLLIVNLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSVLLASIFSLLWVRIDPFTSRVTGPDILECGINC 1065
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CESA8_ORYSJ (Probable cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA8 PE=2 SV=1) HSP 1 Score: 400.593 bits (1028), Expect = 5.923e-111 Identity = 190/220 (86.36%), Postives = 203/220 (92.27%), Query Frame = -3 Query: 204 LTAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPDVEQCGINC 863 LT+IPLL+YC LPA+CLLT KFI+P+ISN ASI FISLF+SIFATGILEMRWSGVGIDEWWRNEQFWVIGG+S+HLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDF ELYMFKW L+INLVGVVAG+SYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVW+ILLASIFSLLWVR+DPFTTRVTGPD + CGINC Sbjct: 862 LTSIPLLIYCVLPAICLLTGKFIIPEISNFASIWFISLFISIFATGILEMRWSGVGIDEWWRNEQFWVIGGISAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYMFKWTTLLIPPTTILIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWAILLASIFSLLWVRIDPFTTRVTGPDTQTCGINC 1081
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSJ (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA2 PE=2 SV=1) HSP 1 Score: 398.667 bits (1023), Expect = 2.251e-110 Identity = 189/220 (85.91%), Postives = 204/220 (92.73%), Query Frame = -3 Query: 204 LTAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPDVEQCGINC 863 LT+IPLL+YC LPA+CLLT KFI+P+ISN ASI FISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGG+S+HLFAVFQGLLKVLAGIDT+FTVTSKASDE+GDF ELYMFKW L+INLVGVVAG+SYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVW+ILLASIFSLLWVR+DPFTTRVTGPD ++CGINC Sbjct: 854 LTSIPLLLYCILPAICLLTGKFIIPEISNFASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGISAHLFAVFQGLLKVLAGIDTSFTVTSKASDEEGDFAELYMFKWTTLLIPPTTILIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWAILLASIFSLLWVRIDPFTTRVTGPDTQKCGINC 1073
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSI (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA2 PE=2 SV=1) HSP 1 Score: 398.667 bits (1023), Expect = 2.251e-110 Identity = 189/220 (85.91%), Postives = 204/220 (92.73%), Query Frame = -3 Query: 204 LTAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPDVEQCGINC 863 LT+IPLL+YC LPA+CLLT KFI+P+ISN ASI FISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGG+S+HLFAVFQGLLKVLAGIDT+FTVTSKASDE+GDF ELYMFKW L+INLVGVVAG+SYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVW+ILLASIFSLLWVR+DPFTTRVTGPD ++CGINC Sbjct: 854 LTSIPLLLYCILPAICLLTGKFIIPEISNFASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGISAHLFAVFQGLLKVLAGIDTSFTVTSKASDEEGDFAELYMFKWTTLLIPPTTILIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWAILLASIFSLLWVRIDPFTTRVTGPDTQKCGINC 1073
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSJ (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1) HSP 1 Score: 362.073 bits (928), Expect = 2.334e-99 Identity = 172/220 (78.18%), Postives = 192/220 (87.27%), Query Frame = -3 Query: 204 TAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKAS-DEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPDVEQCGINC 860 T++PLL YCTLPAVCLLT KFIMP IS AS+ FI+LF+SIFATGILEMRWSGV I+EWWRNEQFWVIGGVS+HLFAV QGLLKVLAGIDTNFTVTSKA+ DED +F ELY FKW L++N++GVVAGVS AIN+G ++WGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVV+WS+LLASIFSLLWVR+DPFT + GPDV QCGINC Sbjct: 836 TSLPLLAYCTLPAVCLLTGKFIMPPISTFASLFFIALFISIFATGILEMRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATGDEDDEFAELYAFKWTTLLIPPTTLLILNIIGVVAGVSDAINNGSEAWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFTIKARGPDVRQCGINC 1055
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSI (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1) HSP 1 Score: 362.073 bits (928), Expect = 2.334e-99 Identity = 172/220 (78.18%), Postives = 192/220 (87.27%), Query Frame = -3 Query: 204 TAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKAS-DEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPDVEQCGINC 860 T++PLL YCTLPAVCLLT KFIMP IS AS+ FI+LF+SIFATGILEMRWSGV I+EWWRNEQFWVIGGVS+HLFAV QGLLKVLAGIDTNFTVTSKA+ DED +F ELY FKW L++N++GVVAGVS AIN+G ++WGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVV+WS+LLASIFSLLWVR+DPFT + GPDV QCGINC Sbjct: 836 TSLPLLAYCTLPAVCLLTGKFIMPPISTFASLFFIALFISIFATGILEMRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATGDEDDEFAELYAFKWTTLLIPPTTLLILNIIGVVAGVSDAINNGSEAWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFTIKARGPDVRQCGINC 1055
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSJ (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA1 PE=2 SV=1) HSP 1 Score: 359.377 bits (921), Expect = 1.513e-98 Identity = 170/221 (76.92%), Postives = 192/221 (86.88%), Query Frame = -3 Query: 204 LTAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRV-TGPDVEQCGINC 863 +T+IPL+ YC LPA+CLLTNKFI+P+ISN A + FI LF SIFATGILE+RWSGVGI++WWRNEQFWVIGG S+HLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDF ELY+FKW LVINLVG+VAG+SYAINSGYQSWGPLFGKLFF+ WVI+HLYPFLKGLMGRQNRTPTIV+VWSILLASIFSLLWV++DPF + + QCG+NC Sbjct: 856 ITSIPLIAYCVLPAICLLTNKFIIPEISNYAGMFFILLFASIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYVFKWTSLLIPPTTVLVINLVGMVAGISYAINSGYQSWGPLFGKLFFSIWVILHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVKIDPFISPTQKAVALGQCGVNC 1076
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSI (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA1 PE=2 SV=1) HSP 1 Score: 359.377 bits (921), Expect = 1.513e-98 Identity = 170/221 (76.92%), Postives = 192/221 (86.88%), Query Frame = -3 Query: 204 LTAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRV-TGPDVEQCGINC 863 +T+IPL+ YC LPA+CLLTNKFI+P+ISN A + FI LF SIFATGILE+RWSGVGI++WWRNEQFWVIGG S+HLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDF ELY+FKW LVINLVG+VAG+SYAINSGYQSWGPLFGKLFF+ WVI+HLYPFLKGLMGRQNRTPTIV+VWSILLASIFSLLWV++DPF + + QCG+NC Sbjct: 856 ITSIPLIAYCVLPAICLLTNKFIIPEISNYAGMFFILLFASIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYVFKWTSLLIPPTTVLVINLVGMVAGISYAINSGYQSWGPLFGKLFFSIWVILHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVKIDPFISPTQKAVALGQCGVNC 1076
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CESA7_ARATH (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1) HSP 1 Score: 356.295 bits (913), Expect = 1.281e-97 Identity = 167/219 (76.26%), Postives = 189/219 (86.30%), Query Frame = -3 Query: 204 TAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPDVEQCGINC 860 T+IPLL YC LPA+CLLT+KFIMP IS AS+ FISLF+SI TGILE+RWSGV I+EWWRNEQFWVIGG+S+HLFAV QGLLK+LAGIDTNFTVTSKA+D+D DF ELY FKW L+IN+VGVVAG+S AIN+GYQSWGPLFGKLFF+FWVIVHLYPFLKGLMGRQNRTPTIVV+WS+LLASIFSLLWVR+DPF + GPD +CGINC Sbjct: 809 TSIPLLAYCILPAICLLTDKFIMPPISTFASLFFISLFMSIIVTGILELRWSGVSIEEWWRNEQFWVIGGISAHLFAVVQGLLKILAGIDTNFTVTSKATDDD-DFGELYAFKWTTLLIPPTTVLIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVLKTKGPDTSKCGINC 1026
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSJ (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA5 PE=2 SV=1) HSP 1 Score: 352.058 bits (902), Expect = 2.416e-96 Identity = 164/219 (74.89%), Postives = 193/219 (88.13%), Query Frame = -3 Query: 204 TAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPDVEQCGINC 860 T+IPLL YCTLPA+CLLT KFI P+++N+AS+ F+SLF+ IFATGILEMRWSGVGID+WWRNEQFWVIGGVSSHLFAVFQGLLKV+AGIDT+FTVTSK D++ +F+ELY FKW L++N +GVVAGVS AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL+GRQNRTPTIV+VWSILLASIFSLLWVR+DPF + GP +E+CG++C Sbjct: 874 TSIPLLAYCTLPAICLLTGKFITPELTNIASLWFMSLFICIFATGILEMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGLLKVIAGIDTSFTVTSKGGDDE-EFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKNDGPLLEECGLDC 1091 The following BLAST results are available for this feature:
BLAST of CX675323 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >CX675323 ID=CX675323; Name=CX675323; organism=Citrus sinensis; type=EST; length=865bpback to top |