CX675323

Overview
NameCX675323
Unique NameCX675323
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length865
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CESA2_ARATH (Cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Arabidopsis thaliana GN=CESA2 PE=1 SV=1)

HSP 1 Score: 324.324 bits (830), Expect = 5.394e-88
Identity = 150/219 (68.49%), Postives = 187/219 (85.39%), Query Frame = -3
Query:  204 TAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPDVEQCGINC 860
            T++PL++YC+LPAVCLLT KFI+P+ISN A I+F+ +F+SI  TGILEM+W GVGID+WWRNEQFWVIGG SSHLFA+FQGLLKVLAG++TNFTVTSKA+D DG F+ELY+FKW          L+IN++GV+ GVS AI++GY SWGPLFG+LFFA WVIVHLYPFLKG++G+Q++ PTI+VVWSILLASI +LLWVRV+PF  +  GP +E CG+NC
Sbjct:  866 TSLPLIVYCSLPAVCLLTGKFIVPEISNYAGILFMLMFISIAVTGILEMQWGGVGIDDWWRNEQFWVIGGASSHLFALFQGLLKVLAGVNTNFTVTSKAAD-DGAFSELYIFKWTTLLIPPTTLLIINIIGVIVGVSDAISNGYDSWGPLFGRLFFALWVIVHLYPFLKGMLGKQDKMPTIIVVWSILLASILTLLWVRVNPFVAK-GGPVLEICGLNC 1082          
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSJ (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA4 PE=2 SV=1)

HSP 1 Score: 316.62 bits (810), Expect = 1.125e-85
Identity = 144/203 (70.94%), Postives = 177/203 (87.19%), Query Frame = -3
Query:  252 TAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPF 860
            T++PL+ YC LPA+CLLT KFI+P +SN A+I F+ LF+SI  T +LE+RWSG+GI++WWRNEQFWVIGGVS+HLFAVFQG+LK++AG+DTNFTVT+KA+D D +F ELY+FKW          LV+NLVGVVAG S A+NSGY+SWGPLFGK+FFA WVI+HLYPFLKGLMGRQNRTPTIVV+WS+LLAS+FSLLWV++DPF
Sbjct:  771 TSLPLIAYCCLPAICLLTGKFIIPTLSNAATIWFLGLFISIIVTSVLELRWSGIGIEDWWRNEQFWVIGGVSAHLFAVFQGILKMIAGLDTNFTVTAKATD-DTEFGELYVFKWTTVLIPPTSILVLNLVGVVAGFSDALNSGYESWGPLFGKVFFAMWVIMHLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLLWVKIDPF 972          
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSI (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA4 PE=2 SV=2)

HSP 1 Score: 316.62 bits (810), Expect = 1.125e-85
Identity = 144/203 (70.94%), Postives = 177/203 (87.19%), Query Frame = -3
Query:  252 TAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPF 860
            T++PL+ YC LPA+CLLT KFI+P +SN A+I F+ LF+SI  T +LE+RWSG+GI++WWRNEQFWVIGGVS+HLFAVFQG+LK++AG+DTNFTVT+KA+D D +F ELY+FKW          LV+NLVGVVAG S A+NSGY+SWGPLFGK+FFA WVI+HLYPFLKGLMGRQNRTPTIVV+WS+LLAS+FSLLWV++DPF
Sbjct:  771 TSLPLIAYCCLPAICLLTGKFIIPTLSNAATIWFLGLFISIIVTSVLELRWSGIGIEDWWRNEQFWVIGGVSAHLFAVFQGILKMIAGLDTNFTVTAKATD-DTEFGELYVFKWTTVLIPPTSILVLNLVGVVAGFSDALNSGYESWGPLFGKVFFAMWVIMHLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLLWVKIDPF 972          
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CESA8_ARATH (Cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Arabidopsis thaliana GN=CESA8 PE=1 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 1.624e-84
Identity = 146/219 (66.67%), Postives = 181/219 (82.65%), Query Frame = -3
Query:  204 TAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPDVEQCGINC 860
            T++PL+ YCTLPA+CLLT KFI+P +SNLAS++F+ LF+SI  T +LE+RWSGV I++ WRNEQFWVIGGVS+HLFAVFQG LK+LAG+DTNFTVTSK +D D +F ELY+ KW          L+INLVGVVAG S A+N GY++WGPLFGK+FFAFWVI+HLYPFLKGLMGRQNRTPTIV++WSILLAS+FSL+WVR++PF ++    D     +NC
Sbjct:  766 TSLPLVAYCTLPAICLLTGKFIIPTLSNLASMLFLGLFISIILTSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGFLKMLAGLDTNFTVTSKTAD-DLEFGELYIVKWTTLLIPPTSLLIINLVGVVAGFSDALNKGYEAWGPLFGKVFFAFWVILHLYPFLKGLMGRQNRTPTIVILWSILLASVFSLVWVRINPFVSKT---DTTSLSLNC 980          
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CSLD1_ARATH (Cellulose synthase-like protein D1 OS=Arabidopsis thaliana GN=CSLD1 PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 3.529e-55
Identity = 105/208 (50.48%), Postives = 141/208 (67.79%), Query Frame = -3
Query:  255 TAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFAT----GILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGD--FTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDP 860
            T+I L++YC LPA+CL + KFI+  +     I F+S  L I  T     +LE++WSG+G++EWWRNEQFW+IGG S+HL AV QGLLKV+AGI+ +FT+TSKAS ED D  F +LY+ KW          +++NLV +V G S  I S    WG L G +FF+ WV+ H+YPF KGLMGR+ + PTIV VWS L++   SLLW+ + P
Sbjct:  821 TSIFLVVYCFLPALCLFSGKFIVQSLD----IHFLSYLLCITVTLTLISLLEVKWSGIGLEEWWRNEQFWLIGGTSAHLAAVVQGLLKVIAGIEISFTLTSKASGEDEDDIFADLYIVKWTGLFIMPLTIIIVNLVAIVIGASRTIYSVIPQWGKLMGGIFFSLWVLTHMYPFAKGLMGRRGKVPTIVYVWSGLVSITVSLLWITISP 1024          
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CSLD5_ARATH (Cellulose synthase-like protein D5 OS=Arabidopsis thaliana GN=CSLD5 PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.483e-53
Identity = 96/205 (46.83%), Postives = 140/205 (68.29%), Query Frame = -3
Query:  255 TAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKAS---DEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDP 860
            T++ L++YC LPA+ L + +FI+  +     I  +S+ L++    +LE++WSG+ + EWWRNEQFWVIGG S+H  AV QGLLKV+AG+D +FT+TSK+S   D D +F +LY+ KW          +++N++ +  G++  + S +  W  L G +FF+FWV+ HLYPF KGLMGR+ R PTIV VWS LL+ I SLLWV ++P
Sbjct:  964 TSLFLIVYCILPAISLFSGQFIVQSLDITFLIYLLSITLTLCMLSLLEIKWSGITLHEWWRNEQFWVIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKSSAPEDGDDEFADLYVVKWSFLMVPPLTIMMVNMIAIAVGLARTLYSPFPQWSKLVGGVFFSFWVLCHLYPFAKGLMGRRGRVPTIVFVWSGLLSIIVSLLWVYINP 1168          
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CSLD2_ARATH (Cellulose synthase-like protein D2 OS=Arabidopsis thaliana GN=CSLD2 PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.529e-53
Identity = 96/204 (47.06%), Postives = 139/204 (68.14%), Query Frame = -3
Query:  255 TAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKA--SDEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDP 860
            T+I L++YC LPA+ L + +FI+  ++    +  + + +++    +LE++WSG+ ++EWWRNEQFW+IGG S+HL AV QGLLKV+AG++ +FT+TSK+   D D +F +LYM KW          +++NL+ +  G S  I S    W  L G +FF+FWV+ HLYPF KGLMGR+ RTPTIV VWS L+A   SLLWV ++P
Sbjct:  928 TSIFLIVYCFLPALSLFSGQFIVQTLNVTFLVYLLIISITLCLLALLEIKWSGISLEEWWRNEQFWLIGGTSAHLAAVLQGLLKVVAGVEISFTLTSKSGGDDIDDEFADLYMVKWTSLMIPPITIIMVNLIAIAVGFSRTIYSVVPQWSKLIGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWVAINP 1131          
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSJ (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. japonica GN=CSLD2 PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 4.314e-53
Identity = 97/204 (47.55%), Postives = 138/204 (67.65%), Query Frame = -3
Query:  255 TAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGD--FTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDP 860
            T+I L++YC LPA+ L + +FI+  ++       + + L++    +LE++WSG+ ++EWWRNEQFW+IGG S+HL AV QGLLKV+AGI+ +FT+TSK+  ++ D  F +LY+ KW          +++NL+ +  G S  I S    W  L G +FF+FWV+ HLYPF KGLMGR+ RTPTIV VWS LLA   SLLWV ++P
Sbjct:  953 TSIFLIVYCFLPALSLFSGQFIVRTLNVTFLTYLLVITLTMCMLAVLEIKWSGISLEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDEADDEFADLYIVKWTSLMIPPIVIMMVNLIAIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLLAITISLLWVAINP 1156          
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSI (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. indica GN=CSLD2 PE=3 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 4.314e-53
Identity = 97/204 (47.55%), Postives = 138/204 (67.65%), Query Frame = -3
Query:  255 TAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGD--FTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDP 860
            T+I L++YC LPA+ L + +FI+  ++       + + L++    +LE++WSG+ ++EWWRNEQFW+IGG S+HL AV QGLLKV+AGI+ +FT+TSK+  ++ D  F +LY+ KW          +++NL+ +  G S  I S    W  L G +FF+FWV+ HLYPF KGLMGR+ RTPTIV VWS LLA   SLLWV ++P
Sbjct:  953 TSIFLIVYCFLPALSLFSGQFIVRTLNVTFLTYLLVITLTMCMLAVLEIKWSGISLEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDEADDEFADLYIVKWTSLMIPPIVIMMVNLIAIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLLAITISLLWVAINP 1156          
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CSLD3_ARATH (Cellulose synthase-like protein D3 OS=Arabidopsis thaliana GN=CSLD3 PE=1 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 7.358e-53
Identity = 96/204 (47.06%), Postives = 138/204 (67.65%), Query Frame = -3
Query:  255 TAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGD--FTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDP 860
            T+  L++YC LPA+ L + +FI+  ++    +  + + +++    +LE++WSG+ ++EWWRNEQFW+IGG S+HL AV QGLLKV+AGI+ +FT+TSK+  ED D  F +LY+ KW          +++NL+ +  G S  I S    W  L G +FF+FWV+ HLYPF KGLMGR+ RTPTIV VWS L+A   SLLWV ++P
Sbjct:  928 TSFFLIVYCFLPALSLFSGQFIVQTLNVTFLVYLLIISITLCLLALLEIKWSGISLEEWWRNEQFWLIGGTSAHLAAVIQGLLKVVAGIEISFTLTSKSGGEDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGFSRTIYSVIPQWSKLIGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWVAINP 1131          
The following BLAST results are available for this feature:
BLAST of CX675323 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
CESA2_ARATH5.394e-8868.49Cellulose synthase A catalytic subunit 2 [UDP-form... [more]
CESA4_ORYSJ1.125e-8570.94Cellulose synthase A catalytic subunit 4 [UDP-form... [more]
CESA4_ORYSI1.125e-8570.94Cellulose synthase A catalytic subunit 4 [UDP-form... [more]
CESA8_ARATH1.624e-8466.67Cellulose synthase A catalytic subunit 8 [UDP-form... [more]
CSLD1_ARATH3.529e-5550.48Cellulose synthase-like protein D1 OS=Arabidopsis ... [more]
CSLD5_ARATH1.483e-5346.83Cellulose synthase-like protein D5 OS=Arabidopsis ... [more]
CSLD2_ARATH2.529e-5347.06Cellulose synthase-like protein D2 OS=Arabidopsis ... [more]
CSLD2_ORYSJ4.314e-5347.55Cellulose synthase-like protein D2 OS=Oryza sativa... [more]
CSLD2_ORYSI4.314e-5347.55Cellulose synthase-like protein D2 OS=Oryza sativa... [more]
CSLD3_ARATH7.358e-5347.06Cellulose synthase-like protein D3 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_61E02_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-61E02-J3-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675323 ID=CX675323; Name=CX675323; organism=Citrus sinensis; type=EST; length=865bp
TTTTTTTTAGTTTTCACCACCTATAGATATATAAATATATGTATCCTGCA
CAAGATGCGAATTCACATACACAAAAACAAGTTCACATACACAAAAACAA
GTTCACTGACAGGACGAGGAGGCAAAATCATGAACTTCAGTGATTCCCAC
CTTTTAGACTTGAGACCAAAACAATTTTTCTGAAATACAGCCACTATTTG
TCAGCAGTTGATTCCACATTGCTCGACATCAGGACCAGTGACTCTGGTGG
TAAAGGGATCAACTCGCACCCATAGTAAAGAGAATATGGAGGCAAGGAGA
ATTGACCACACGACAACAATGGTGGGTGTCCGGTTTTGGCGTCCCATCAA
ACCTTTGAGGAAGGGGTAAAGATGGACGATCACCCAAAAGGCAAAGAATA
GCTTACCAAAGAGAGGACCCCATGATTGATACCCGCTGTTGATGGCATAC
GAGACACCCGCAACTACACCAACCAAGTTTATGACAAGAAGAGTTGTTGG
TGGAATAAGTAGTGTTGTCCATTTGAACATATAGAGCTCAGTAAAATCTC
CGTCTTCATCTGATGCCTTGGAGGTGACAGTGAAGTTGGTGTCAATACCA
GCAAGTACTTTGAGAAGACCTTGGAAAACAGCAAATAGATGGGATGAAAC
ACCGCCAATAACCCAAAACTGTTCGTTTCTCCACCATTCATCGATTCCAA
CACCACTCCACCTCATTTCCAGAATACCAGTGGCGAAGATGGACAGAAAG
AGAGAAATAAACACTATACTGGCAAGGTTACTAATCTGAGGCATAATGAA
CTTGTTCGTTAATAGACAGACAGCTGGCAGCGTGCAATACATGAGAAGAG
GAATTGCAGTGAGAG
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