CX675323
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSJ (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. japonica GN=CSLD1 PE=2 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.255e-52 Identity = 101/206 (49.03%), Postives = 139/206 (67.48%), Query Frame = -3 Query: 255 TAIPLLMYCTLPAVCLLTNKFIMP--QISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSK--ASDEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDP 860 T++ L++YC LPA+ L + +FI+ ++ L ++ I++ L + A +LE++WSG+ ++EWWRNEQFW+IGG S+HL AV QGLLKV+AGI+ +FT+TSK D D +F ELY KW ++INLV + G S I S W L G +FF+FWV+ HLYPF KGLMGR+ RTPTIV VWS L+A SLLW+ + P Sbjct: 908 TSVFLIVYCFLPALSLFSGQFIVQTLNVTFLTYLLIITITLCLLA--MLEIKWSGIALEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKQLGDDVDDEFAELYAVKWTSLMIPPLTIIMINLVAIAVGFSRTIYSTIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWIAIKP 1111
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSI (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. indica GN=CSLD1 PE=2 SV=2) HSP 1 Score: 206.838 bits (525), Expect = 1.255e-52 Identity = 101/206 (49.03%), Postives = 139/206 (67.48%), Query Frame = -3 Query: 255 TAIPLLMYCTLPAVCLLTNKFIMP--QISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSK--ASDEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDP 860 T++ L++YC LPA+ L + +FI+ ++ L ++ I++ L + A +LE++WSG+ ++EWWRNEQFW+IGG S+HL AV QGLLKV+AGI+ +FT+TSK D D +F ELY KW ++INLV + G S I S W L G +FF+FWV+ HLYPF KGLMGR+ RTPTIV VWS L+A SLLW+ + P Sbjct: 908 TSVFLIVYCFLPALSLFSGQFIVQTLNVTFLTYLLIITITLCLLA--MLEIKWSGIALEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKQLGDDVDDEFAELYAVKWTSLMIPPLTIIMINLVAIAVGFSRTIYSTIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWIAIKP 1111
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSJ (Cellulose synthase-like protein D5 OS=Oryza sativa subsp. japonica GN=CSLD5 PE=2 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.388e-51 Identity = 95/204 (46.57%), Postives = 137/204 (67.16%), Query Frame = -3 Query: 255 TAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGD--FTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDP 860 T++ L+MYC LPA+ L + +FI+ + + + +++ +LE++WSG+G++EWWRNEQFWVIGG S+HL AV QGLLKV+AGI+ +FT+T+KA+ ED D F ELY+ KW + IN++ +V GVS + + + L G FF+FWV+ H YPF KGLMGR+ RTPTIV VW+ L++ SLLW+ + P Sbjct: 797 TSLFLIMYCLLPALSLFSGQFIVATLDPTFLSYLLLITITLMLLCLLEVKWSGIGLEEWWRNEQFWVIGGTSAHLAAVLQGLLKVVAGIEISFTLTAKAAAEDDDDPFAELYLIKWTSLFIPPLAVIGINIIALVVGVSRTVYAEIPQYSKLLGGGFFSFWVLAHYYPFAKGLMGRRGRTPTIVYVWAGLISITVSLLWITISP 1000
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSI (Putative cellulose synthase-like protein D5 OS=Oryza sativa subsp. indica GN=CSLD5 PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.388e-51 Identity = 95/204 (46.57%), Postives = 137/204 (67.16%), Query Frame = -3 Query: 255 TAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGD--FTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDP 860 T++ L+MYC LPA+ L + +FI+ + + + +++ +LE++WSG+G++EWWRNEQFWVIGG S+HL AV QGLLKV+AGI+ +FT+T+KA+ ED D F ELY+ KW + IN++ +V GVS + + + L G FF+FWV+ H YPF KGLMGR+ RTPTIV VW+ L++ SLLW+ + P Sbjct: 797 TSLFLIMYCLLPALSLFSGQFIVATLDPTFLSYLLLITITLMLLCLLEVKWSGIGLEEWWRNEQFWVIGGTSAHLAAVLQGLLKVVAGIEISFTLTAKAAAEDDDDPFAELYLIKWTSLFIPPLAVIGINIIALVVGVSRTVYAEIPQYSKLLGGGFFSFWVLAHYYPFAKGLMGRRGRTPTIVYVWAGLISITVSLLWITISP 1000
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CSLD6_ARATH (Putative cellulose synthase-like protein D6 OS=Arabidopsis thaliana GN=CSLD6 PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.617e-50 Identity = 90/204 (44.12%), Postives = 135/204 (66.18%), Query Frame = -3 Query: 261 TAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKAS----DEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRV 860 T+I +L YC LP + L + F++ ++ I + + LS+ +LE++WSG+ ++EWWRNEQFW+IGG S+HL AV QG+LKV+AG++ +FT+TSK+S DED +F +LY+FKW +++N+V ++ V + S W L G FFA WV++H+YPF KGLMGR +TPT+V VWS L+A SLL++ + Sbjct: 763 TSIFILTYCFLPPLSLFSGHFVVETLTGSFLIYLLIITLSLCGLAVLEVKWSGISLEEWWRNEQFWLIGGTSAHLVAVLQGILKVIAGVEISFTLTSKSSTGGDDEDDEFADLYLFKWTALMIPPLTIIILNIVAILFAVCRTVFSANPQWSNLLGGTFFASWVLLHMYPFAKGLMGRGGKTPTVVYVWSGLIAICLSLLYITI 966
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CSLD4_ORYSJ (Cellulose synthase-like protein D4 OS=Oryza sativa subsp. japonica GN=CSLD4 PE=2 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.418e-50 Identity = 100/216 (46.30%), Postives = 137/216 (63.43%), Query Frame = -3 Query: 255 TAIPLLMYCTLPAVCLLTNKFIMPQISN--LASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGD------------FTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDP 860 T++ LL YC LPAV L + KFI+ ++S LA ++ I+L L + A +LE++WSG+ + EWWRNEQFWVIGG S+H AV QGLLKV+AG+D +FT+TSK + GD F ELY +W +++N V + + + S + W L G FF+FWV+ HLYPF KGL+GR+ R PTIV VWS L++ I SLLWV ++P Sbjct: 986 TSVFLLAYCLLPAVSLFSGKFIVQRLSATFLAFLLVITLTLCLLA--LLEIKWSGITLHEWWRNEQFWVIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKPGNGGGDGGVGGEGNDDEAFAELYEVRWSYLMVPPVTIMMVNAVAIAVAAARTLYSEFPQWSKLLGGAFFSFWVLCHLYPFAKGLLGRRGRVPTIVFVWSGLISMIISLLWVYINP 1199
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CSLD4_ARATH (Cellulose synthase-like protein D4 OS=Arabidopsis thaliana GN=CSLD4 PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 5.830e-50 Identity = 87/206 (42.23%), Postives = 134/206 (65.05%), Query Frame = -3 Query: 249 TAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGD--FTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFT 860 T++ L++YC LPA L + +FI+ +S + + + + + +LE++WSG+G++EWWRNEQ+W+I G SSHL+AV QG+LKV+AGI+ +FT+T+K+ +D + + +LY+ KW ++N++ +V I W L G FF+FWV+ HLYPF KGLMGR+ +TPTIV VW+ L+A SLLW ++P T Sbjct: 889 TSLFLILYCFLPAFSLFSGQFIVRTLSISFLVYLLMITICLIGLAVLEVKWSGIGLEEWWRNEQWWLISGTSSHLYAVVQGVLKVIAGIEISFTLTTKSGGDDNEDIYADLYIVKWSSLMIPPIVIAMVNIIAIVVAFIRTIYQAVPQWSKLIGGAFFSFWVLAHLYPFAKGLMGRRGKTPTIVFVWAGLIAITISLLWTAINPNT 1094
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CSLD3_ORYSJ (Cellulose synthase-like protein D3 OS=Oryza sativa subsp. japonica GN=CSLD3 PE=2 SV=2) HSP 1 Score: 196.438 bits (498), Expect = 1.696e-49 Identity = 90/204 (44.12%), Postives = 136/204 (66.67%), Query Frame = -3 Query: 255 TAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGD--FTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDP 860 T+I LL+YC +PA+ L + FI+ ++ +++ +++ A GILE++WSG+ +++WWRNEQFW+I G S+HL+AV QGLLKV+AGI+ +FT+T+KA+ +D + + +LY+ KW ++N++ + + I S WG G FF+FWV+ HL PF KGLMGR+ +TPTIV VWS LL+ SLLWV + P Sbjct: 927 TSIFLLVYCFIPALSLFSGFFIVQKLDIAFLCYLLTMTITLVALGILEVKWSGIELEDWWRNEQFWLISGTSAHLYAVVQGLLKVMAGIEISFTLTAKAAADDNEDIYADLYIVKWSSLLIPPITIGMVNIIAIAFAFARTIYSDNPRWGKFIGGGFFSFWVLAHLNPFAKGLMGRRGKTPTIVFVWSGLLSITVSLLWVAISP 1130
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CESAB_ORYSJ (Putative cellulose synthase A catalytic subunit 11 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA11 PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.900e-41 Identity = 91/230 (39.57%), Postives = 126/230 (54.78%), Query Frame = -3 Query: 219 LTAIPLLMYCTLPAVCLLTNKFIMPQ-ISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKAS------------DEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSG-YQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRT-PTIVVVWSILLASIFSLLWVRVDPFTTRVTGPDVEQ 863 L ++PL +YC LPAVCLLT K P +S ++ I L S+ A+ LE+RWS V + WWR+E+ W++ S+ L AVFQG+L GID F+ + AS +E+ +W +V NL GVVA V+Y ++ G YQSWG L KL A WV+ HL FL+GL+ ++R PTI V+WS++ S+ SLLWV F+ P EQ Sbjct: 628 LASLPLTVYCALPAVCLLTGKSTFPSDVSYYDGVLLILLLFSVAASVALELRWSRVPLRAWWRDEKLWMVTATSASLAAVFQGILSACTGIDVAFSTETAASPPKRPAAGNDDGEEEAALASEITMRWTNLLVAPTSVVVANLAGVVAAVAYGVDHGYYQSWGALGAKLALAGWVVAHLQGFLRGLLAPRDRAPPTIAVLWSVVFVSVASLLWVHAASFSAPTAAPTTEQ 857
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CSLF6_ORYSJ (Probable mixed-linked glucan synthase 6 OS=Oryza sativa subsp. japonica GN=CSLF6 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.221e-31 Identity = 65/203 (32.02%), Postives = 118/203 (58.13%), Query Frame = -3 Query: 261 TAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSK--ASDEDGD-FTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRV 860 TA+ L+ Y T+PA+ +T FI+ + + + + + ++ +LE++W+GV + EW+RN QFW+ S++L AV Q + KV+ D +F +TSK A DE D + +LY+ +W +++N++G + ++ + W + G +FF FWV+ HLYPF KG++G+ +TP +V+VW I ++L++ + Sbjct: 716 TALFLIFYTTVPALSFVTGHFIVQRPTTMFYVYLAIVLGTLLILAVLEVKWAGVTVFEWFRNGQFWMTASCSAYLAAVLQVVTKVVFRRDISFKLTSKLPAGDEKKDPYADLYVVRWTWLMITPIIIILVNIIGSAVAFAKVLDGEWTHWLKVAGGVFFNFWVLFHLYPFAKGILGKHGKTPVVVLVWWAFTFVITAVLYINI 918 The following BLAST results are available for this feature:
BLAST of CX675323 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >CX675323 ID=CX675323; Name=CX675323; organism=Citrus sinensis; type=EST; length=865bpback to top |