CX675323
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CSLF7_ORYSJ (Probable mixed-linked glucan synthase 7 OS=Oryza sativa subsp. japonica GN=CSLF7 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.768e-22 Identity = 64/195 (32.82%), Postives = 97/195 (49.74%), Query Frame = -3 Query: 330 TAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFIS-LFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSK--------ASDEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSW---------GPLFGKLFFAFWVIVHLYPFLKGLMGRQNR 860 T++ L+ YC PA+ L+ + F++ L +++ A +LE RWSG+ + EWWRNEQFW++ S++L AV Q LKV G + +F +TSK + +D + ELY +W L +N VA ++ A G W + F WV+VHLYPF GLMGR+++ Sbjct: 611 TSLFLMAYCLFPAIPLIAGGGGWNAAPTPTYVAFLAALMVTLAAVAVLETRWSGIALGEWWRNEQFWMVSATSAYLAAVAQVALKVATGKEISFKLTSKHLASSATPVAGKDRQYAELYAVRWTALMAPTAAALAVN----VASMAAAGGGGRWWWWDAPSAAAAAAAALPVAFNVWVVVHLYPFALGLMGRRSK 801
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSI (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. indica GN=CSLF3 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 7.686e-18 Identity = 61/206 (29.61%), Postives = 107/206 (51.94%), Query Frame = -3 Query: 267 LTAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSK--ASDEDGDFTELYMFKWXXXXXXXXXXLVINL--VGVVAG---VSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWV 863 +T++ +L+Y P + L+ ++ + + + + + L I G LE++W+G+ ++WRNEQF++IG S++ AV ++ +L +F VTSK +D + F +LY +W LV N+ +GV G V + + Q + G L F WV+ LYPF +MGR + P I+VV ++ I +L++V Sbjct: 652 VTSLFILLYAISPVMWLIPDEVYIQRPFTRYVVYLLMIILMIHMIGWLEIKWAGITWLDYWRNEQFFMIGSTSAYPTAVLHMVVNLLTKKGIHFRVTSKQTTADTNDKFADLYEMRWVPMLIPTMVVLVANIGAIGVAIGKMAVYMGVWTIAQKRHAIMG-LLFNMWVMFLLYPFALAIMGRWAKRPIILVVLLPIIFVIVALVYV 856
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CSLF1_ORYSJ (Putative mixed-linked glucan synthase 1 OS=Oryza sativa subsp. japonica GN=CSFL1 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 7.686e-18 Identity = 54/220 (24.55%), Postives = 104/220 (47.27%), Query Frame = -3 Query: 234 LTAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSK--ASDEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGK-------LFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVD-PFTTRVTG 863 + + + Y P + L++ ++ + + + +++ I G+ E++W+G+ + +W RNEQF++IG + AV LK++ G F +TSK A+ F +LY +W +V+N+ V V A +WGPL + F W++V LYPF G+MG+ + P ++ V + + + ++V P+ ++G Sbjct: 628 IVTVFIFFYNLFPVMWLISEQYYIQRPFGEYLLYLVAVIAMIHVIGMFEVKWAGITLLDWCRNEQFYMIGSTGVYPTAVLYMALKLVTGKGIYFRLTSKQTAASSGDKFADLYTVRWVPLLIPTIVIMVVNVAAVGVAVGKA-----AAWGPLTEPGWLAVLGMVFNVWILVLLYPFALGVMGQWGKRPAVLFVAMAMAVAAVAAMYVAFGAPYQAELSG 842
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CSLF4_ORYSJ (Mixed-linked glucan synthase 4 OS=Oryza sativa subsp. japonica GN=CSLF4 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.004e-17 Identity = 54/209 (25.84%), Postives = 103/209 (49.28%), Query Frame = -3 Query: 270 LTAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSK-ASDEDGD-FTELYMFKWXXXXXXXXXXLVINL--VGVVAGVSYAINSGYQSWGPLFGK-------LFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLW 863 + + + Y P + L++ ++ + Q + +++ I G+ E++WSG+ + +W RNEQF++IG + AV LK+ G +F +TSK + GD F +LY +W L +N+ VGV G + A WG L + + F W++ LYPF G+MG++ + P ++ V +++ + ++++ Sbjct: 667 IVTVFIFFYNLFPVMWLISEQYYIQQPFGEYLLYLVAIIAMIHVIGMFEVKWSGITVLDWCRNEQFYMIGSTGVYPTAVLYMALKLFTGKGIHFRLTSKQTTASSGDKFADLYTVRWVPLLIPTIVVLAVNVGAVGVAVGKAAA-------WGLLTEQGRFAVLGMVFNVWILALLYPFALGIMGQRGKRPAVLFVATVMAVAAVAIMY 868
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CSLF2_ORYSJ (Mixed-linked glucan synthase 2 OS=Oryza sativa subsp. japonica GN=CSLF2 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.311e-17 Identity = 55/220 (25.00%), Postives = 105/220 (47.73%), Query Frame = -3 Query: 234 LTAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSK-ASDEDGD-FTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGK-------LFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVD-PFTTRVTG 863 + + + Y P + L++ ++ + + + +++ I G+ E++W+G+ + +W RNEQF++IG + AV LK++ G F +TSK + GD F +LY +W +V+N+ V V A +WGPL + F W++V LYPF G+MG+ + P ++ V + + + ++V P+ ++G Sbjct: 658 IVTVFIFFYNLFPVMWLISEQYYIQRPFGEYLLYLVAVIAMIHVIGMFEVKWAGITLLDWCRNEQFYMIGSTGVYPTAVLYMALKLVTGKGIYFRLTSKQTTASSGDKFADLYTVRWVPLLIPTIVIIVVNVAAVGVAVGKA-----AAWGPLTEPGWLAVLGMVFNVWILVLLYPFALGVMGQWGKRPAVLFVAMAMAVAAVAAMYVAFGAPYQAELSG 872
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CSLF8_ORYSJ (Probable mixed-linked glucan synthase 8 OS=Oryza sativa subsp. japonica GN=CSFL8 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.921e-17 Identity = 55/205 (26.83%), Postives = 100/205 (48.78%), Query Frame = -3 Query: 276 LTAIPLLMYCTLPAVCLLTNKFIMPQ-----ISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKV--LAGIDTNFTVTSKASDEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGY--QSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSL 863 +T++ LL Y P + + F + + + L ++F+S + G++E++W+G+ + +W RNEQF++IG + + AV +LK L G+ T AS F ELY +W + +N+ + A + A+ G+ G L F W+++ +YPF G+MGR ++ P I+ V ++ I +L Sbjct: 656 VTSVFLLFYLLFPVIWIFRGIFYIQKPFPTYVLYLVIVIFMSEMI-----GMVEIKWAGLTLLDWIRNEQFYIIGATAVYPLAVLHIVLKCFGLKGVSFKLTAKQVASSTSEKFAELYDVQWAPLLFPTIVVIAVNICAIGAAIGKALFGGWSLMQMGDASLGLVFNVWILLLIYPFALGIMGRWSKRPYILFVLIVISFVIIAL 855
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CSLF9_ORYSJ (Probable mixed-linked glucan synthase 9 OS=Oryza sativa subsp. japonica GN=CSLF9 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.110e-16 Identity = 59/199 (29.65%), Postives = 105/199 (52.76%), Query Frame = -3 Query: 288 LTAIPLLMYCTLPAVCLLTN-KFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGI-DTNFTVTSK--ASDEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGY---QSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLAS 863 ++A+ +++Y LP + L + +F + + + +++ I G++E++W+G+ + +WWRNEQF++IG +L AV +LK L G+ F +T+K A F ELY W + +N+ + A A+ G+ Q G G L F WV+V LYPF G+MGR ++ P ++++L+A+ Sbjct: 644 VSALFMVVYDLLPVIWLSHHGEFHIQKPFSTYVAYLVAVIAMIEVIGLVEIKWAGLTLLDWWRNEQFYMIGATGVYLAAVLHIVLKRLLGLKGVRFKLTAKQLAGGARERFAELYDVHWSPLLAPTVVVMAVNVTAIGAAAGKAVVGGWTPAQVAGASAG-LVFNVWVLVLLYPFALGIMGRWSKRP--CALFALLVAA 839
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSJ (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. japonica GN=CSLF3 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.449e-16 Identity = 58/207 (28.02%), Postives = 104/207 (50.24%), Query Frame = -3 Query: 267 LTAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSK--ASDEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGK------LFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWV 863 +T++ +L+Y P + L+ ++ + + + + + L I G LE++W+G+ ++WRNEQF++IG S++ AV ++ +L +F VTSK +D + F +LY +W LV N+ + GV+ + Y + K L F WV+ LYPF +MGR + I+VV ++ I +L++V Sbjct: 652 VTSLFILLYAISPVMWLIPDEVYIQRPFTRYVVYLLVIILMIHMIGWLEIKWAGITWLDYWRNEQFFMIGSTSAYPTAVLHMVVNLLTKKGIHFRVTSKQTTADTNDKFADLYEMRWVPMLIPTMVVLVANIGAI--GVAIGKTAVYMGVWTIAQKRHAAMGLLFNMWVMFLLYPFALAIMGRWAKRSIILVVLLPIIFVIVALVYV 856
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CSLG3_ARATH (Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 3.128e-11 Identity = 50/176 (28.41%), Postives = 83/176 (47.16%), Query Frame = -3 Query: 339 AIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASD--EDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGP-LFGKLFFAFWVIVHLYPFLKGLMGR 857 ++PL++Y LP + LL + P+ S+ ++I LFL + +L+ G WW +++ W I G SSHLF + LK L F VTSKA+D E E +F++ + +V ++A V G +WG L +L A + +V+ P + ++ R Sbjct: 548 SLPLIVYGFLPQLALLYQSSVFPKSSDPWFWLYIVLFLGAYGQDLLDFVLEGGTYGGWWNDQRMWSIRGFSSHLFGFIEFTLKTLNLSTHGFNVTSKANDDEEQSKRYEKEIFEFGPSSSMFLPLTTVAIVNLLAFVWGLY--GLFAWGEGLVLELMLASFAVVNCLPIYEAMVLR 721 The following BLAST results are available for this feature:
BLAST of CX675323 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >CX675323 ID=CX675323; Name=CX675323; organism=Citrus sinensis; type=EST; length=865bpback to top |