CK937493
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937493 vs. ExPASy Swiss-Prot
Match: SODC_NPVOP (Putative superoxide dismutase [Cu-Zn] OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=SOD PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.102e-31 Identity = 71/151 (47.02%), Postives = 90/151 (59.60%), Query Frame = 2 Query: 116 VKAVAVLGGTEGVKGTVSFAQEG-DGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTAT-FTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 562 +KA+ ++ G G + F Q D P +++G L L G HGFHVH GDT+NGC S G HFNP + HGAP+ RH T + DN I L GP SI+GR++VVH D DDLG G H LSK+TGN+GGR+ CGIIG+ Sbjct: 1 MKAICIVAGE--ASGRIYFKQGAPDEPVSITGYLLNLPRGLHGFHVHEFGDTSNGCTSAGEHFNPTRQRHGAPDAAERHVGDLGNVRSAGCTALTAIHMSDNVITLFGPLSILGRSLVVHTDRDDLGLGEHPLSKTTGNSGGRLGCGIIGV 149
BLAST of CK937493 vs. ExPASy Swiss-Prot
Match: SODC6_DICDI (Probable superoxide dismutase [Cu-Zn] 6 OS=Dictyostelium discoideum GN=sodF PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.745e-31 Identity = 66/149 (44.30%), Postives = 94/149 (63.09%), Query Frame = 2 Query: 113 MVKAVAVLGGTEGVKGTVSFAQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGII 556 MV A+ ++ G GV+G V+ +QE +G P ++G++SGL PG HG HVH GDT+NGC+S G H+NP +EHG+P D RH AT ++ D + L G S++GR +V+H+D DD G+G SK+ G++G RV CGII Sbjct: 1 MVNAIVIIKGL-GVEGKVTLSQECEGSPIYINGTVSGLTPGQHGMHVHEFGDTSNGCISAGDHYNPLHREHGSPLDVERHIGDLGNIKALSNGVATISIRDTIMSLFGDISVMGRTMVIHSDRDDYGRGNFPDSKTAGHSGKRVGCGII 148
BLAST of CK937493 vs. ExPASy Swiss-Prot
Match: CCS_HUMAN (Copper chaperone for superoxide dismutase OS=Homo sapiens GN=CCS PE=1 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.324e-30 Identity = 66/145 (45.52%), Postives = 85/145 (58.62%), Query Frame = 2 Query: 122 AVAVLGGTEGVKGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGII 556 AVA+LGG V+G V F Q + G++ GL+PG HG HVH GD TN C S G HFNP G HG P+D +RH A F + D Q+ + +IGR++++ DDLG+GGH LSK TGN+G R+ACGII Sbjct: 89 AVAILGGPGTVQGVVRFLQLTPERCLIEGTIDGLEPGLHGLHVHQYGDLTNNCNSCGNHFNPDGASHGGPQDSDRHRGDLGNVRADADGRAIFRMEDEQLKVW---DVIGRSLIIDEGEDDLGRGGHPLSKITGNSGERLACGII 230
BLAST of CK937493 vs. ExPASy Swiss-Prot
Match: CCS_RAT (Copper chaperone for superoxide dismutase OS=Rattus norvegicus GN=Ccs PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.964e-30 Identity = 66/145 (45.52%), Postives = 85/145 (58.62%), Query Frame = 2 Query: 122 AVAVLGGTEGVKGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGII 556 AVA++ G+ V+G V F Q + G++ GL+PG HG HVH GD T C S G HFNP G HG P+D +RH ATF + D Q+ + +IGR++VV DDLG+GGH LSK TGN+G R+ACGII Sbjct: 89 AVAIMEGSGTVQGVVRFLQLSSELCLIEGTIDGLEPGLHGLHVHQYGDLTKDCSSCGDHFNPDGASHGGPQDTDRHRGDLGNVHAEASGRATFRIEDKQLKVW---DVIGRSLVVDEGEDDLGRGGHPLSKVTGNSGKRLACGII 230
BLAST of CK937493 vs. ExPASy Swiss-Prot
Match: SODE_DIRIM (Extracellular superoxide dismutase [Cu-Zn] OS=Dirofilaria immitis PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.178e-30 Identity = 69/152 (45.39%), Postives = 89/152 (58.55%), Query Frame = 2 Query: 119 KAVAVLGGTEGVKGTVSFAQEGDGP-TTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKG---GHELSKSTGNAGGRVACGIIGL 562 KAVAVL ++ V G + F Q TT+ G+++GL PG HGFH+H G NGC S H+NP K HG P ++ +H A ++ N I LSGP S+IGR++VVHA+PDDLGKG E S TGNAG R+ C IIG+ Sbjct: 41 KAVAVLK-SDTVNGIIYFQQNNRASATTIYGTINGLTPGLHGFHIHQYGIKANGCTSAAAHYNPFEKTHGRPTNNIKHIGDLRNIKAGADGVANVNIISNHIQLSGPLSVIGRSLVVHANPDDLGKGNGDAREESLKTGNAGSRIVCSIIGI 191
BLAST of CK937493 vs. ExPASy Swiss-Prot
Match: SODC_PBCV1 (Superoxide dismutase [Cu-Zn] OS=Paramecium bursaria Chlorella virus 1 GN=A245R PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.178e-30 Identity = 72/149 (48.32%), Postives = 86/149 (57.72%), Query Frame = 2 Query: 116 VKAVAVLGGTEGVKGTVSFAQEGDGPTTVSGSLSGLKPG-PHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIG 559 V A+AVL G VKGTV F +E +S +SGLKP HGFHVH GD T+GC S HFNP G HG P+ RH A ++ D+ I L G +IIGRA+VVHAD DDLG GG+ S TGNAG R+ C +IG Sbjct: 35 VSAIAVLEGP--VKGTVRFVEESS-KVKISVDISGLKPNRKHGFHVHEAGDLTDGCTSACAHFNPFGTAHGGPDSKIRHVGDLGNILADKNGKAKYSFYDSMIKLRGKCNIIGRAIVVHADTDDLGLGGNAESLKTGNAGKRIGCAVIG 180
BLAST of CK937493 vs. ExPASy Swiss-Prot
Match: CCS_PIG (Copper chaperone for superoxide dismutase OS=Sus scrofa GN=CCS PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.178e-30 Identity = 66/145 (45.52%), Postives = 84/145 (57.93%), Query Frame = 2 Query: 122 AVAVLGGTEGVKGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGII 556 AVA+LGG+ V+G V F Q + G++ GLKPG HG HVH GD T C S G HFNP G HG P+D +RH A F + D + + +IGR++V+ DDLG+GGH LSK TGN+G R+ACGII Sbjct: 89 AVAILGGSGPVQGVVRFLQLTPERCLIEGTIDGLKPGLHGLHVHQFGDLTRNCNSCGDHFNPDGMSHGGPQDSDRHRGDLGNVCADADGRAVFRMEDELLKVW---DVIGRSLVIDEGEDDLGRGGHPLSKITGNSGERLACGII 230
BLAST of CK937493 vs. ExPASy Swiss-Prot
Match: CCS_MOUSE (Copper chaperone for superoxide dismutase OS=Mus musculus GN=Ccs PE=1 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.178e-30 Identity = 65/145 (44.83%), Postives = 84/145 (57.93%), Query Frame = 2 Query: 122 AVAVLGGTEGVKGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGII 556 AVA+L G ++G V F Q + G++ GL+PG HG HVH GD T C S G HFNP G HG P+D +RH ATF + D Q+ + +IGR++V+ DDLG+GGH LSK TGN+G R+ACGII Sbjct: 89 AVAILEGCGSIQGVVRFLQLSSELCLIEGTIDGLEPGLHGLHVHQYGDLTRDCNSCGDHFNPDGASHGGPQDTDRHRGDLGNVRAEAGGRATFRIEDKQLKVW---DVIGRSLVIDEGEDDLGRGGHPLSKITGNSGKRLACGII 230
BLAST of CK937493 vs. ExPASy Swiss-Prot
Match: SODC_SCHPO (Superoxide dismutase [Cu-Zn] OS=Schizosaccharomyces pombe GN=sod1 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.275e-28 Identity = 72/152 (47.37%), Postives = 83/152 (54.61%), Query Frame = 2 Query: 113 MVKAVAVLGGTEGVKGTVSFAQ-EGDGPTTVSGSLSGLKPGP-HGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 562 MV+AVAVL G V G V+F Q + + +V L G GFH+H GD TNGC S GPHFNP GK HG RH T D+ I L G NSIIGR +V+HA DDLGKG E S TGNAG R ACG+IG+ Sbjct: 1 MVRAVAVLRGDSKVSGVVTFEQVDQNSQVSVIVDLVGNDANAKRGFHIHQFGDNTNGCTSAGPHFNPEGKTHGDRTAAVRHVGDLGNLESDAQGNIKTTFSDSVISLFGANSIIGRTIVIHAGEDDLGKGTSEESLKTGNAGARNACGVIGI 152
BLAST of CK937493 vs. ExPASy Swiss-Prot
Match: SODC_LAMCR (Superoxide dismutase [Cu-Zn] (Fragment) OS=Lampanyctus crocodilus GN=sod1 PE=1 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 1.559e-26 Identity = 68/146 (46.58%), Postives = 80/146 (54.79%), Query Frame = 2 Query: 113 MVKAVAVLGGTEG-VKGTVSFAQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVA 544 MVKAV VL GT G V GTV F QE D P ++G + GL PG HGFHVHA GD TN H P D +RH A + D + L+GP SIIGR +V+H DDLGKGG++ S TGNAGGR+A Sbjct: 1 MVKAVCVLKGTTGEVTGTVYFEQESDSAPVKLTGQIIGLAPGLHGFHVHAFGDNTNXXXXXXXXXXXXXXTHAGPTDKDRHVGDLGN-------VAKIDITDKMLTLNGPLSIIGRTMVIHEKADDLGKGGNDESLKTGNAGGRMA 139 The following BLAST results are available for this feature:
BLAST of CK937493 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 143
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937493 ID=CK937493; Name=CK937493; organism=Citrus sinensis; type=EST; length=737bpback to top |